RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W YAR028WP39548 234 aa1.97□□□□□ -2.09
NUP170YBL079W AVT6P40074 448 aa1.97□□□□□ -2.09
NUP170YBL079W GAT2P40209 560 aa1.97□□□□□ -2.09
NUP170YBL079W MSS2P40990 351 aa1.97□□□□□ -2.09
NUP170YBL079W MDJ2P42834 146 aa1.97□□□□□ -2.09
NUP170YBL079W MRX5P47007 382 aa1.97□□□□□ -2.09
NUP170YBL079W AVT4P50944 713 aa1.97□□□□□ -2.09
NUP170YBL079W VBA1Q04301 562 aa1.97□□□□□ -2.09
NUP170YBL079W LPP1Q04396 274 aa1.97□□□□□ -2.09
NUP170YBL079W SPC2Q04969 178 aa1.97□□□□□ -2.09
NUP170YBL079W NOC4Q06512 552 aaPredicted RBP1.97□□□□□ -2.09
NUP170YBL079W MCH4Q08268 501 aa1.97□□□□□ -2.09
NUP170YBL079W SKI7Q08491 747 aaPredicted RBP1.97□□□□□ -2.09
NUP170YBL079W MED2Q12124 431 aa1.97□□□□□ -2.09
NUP170YBL079W TAF3Q12297 353 aa1.97□□□□□ -2.09
NUP170YBL079W RTR2Q12378 196 aa1.97□□□□□ -2.09
NUP170YBL079W YDL007C-AQ2V2Q0 85 aa1.97□□□□□ -2.09
NUP170YBL079W ARG81P05085 880 aa1.97□□□□□ -2.09
NUP170YBL079W YMR085WP0CF18 432 aa1.97□□□□□ -2.09
NUP170YBL079W ROX3P25046 220 aa1.97□□□□□ -2.09
NUP170YBL079W GIT1P25346 518 aa1.97□□□□□ -2.09
NUP170YBL079W ERG2P32352 222 aa1.97□□□□□ -2.09
NUP170YBL079W PRP19P32523 503 aaKnown RBP1.97□□□□□ -2.09
NUP170YBL079W CBT1P36038 271 aaPredicted RBP1.97□□□□□ -2.09
NUP170YBL079W CHL4P38907 458 aa1.97□□□□□ -2.09
NUP170YBL079W SWD1P39706 426 aa1.97□□□□□ -2.09
NUP170YBL079W DLS1P40366 167 aa1.97□□□□□ -2.09
NUP170YBL079W AIM36Q03798 255 aa1.97□□□□□ -2.09
NUP170YBL079W SPG4Q04438 115 aa1.97□□□□□ -2.09
NUP170YBL079W CRT10Q08226 957 aa1.97□□□□□ -2.09
NUP170YBL079W AGC1Q12482 902 aa1.97□□□□□ -2.09
NUP170YBL079W RPC40P07703 335 aaKnown RBP1.97□□□□□ -2.09
NUP170YBL079W CTA1P15202 515 aa1.97□□□□□ -2.09
NUP170YBL079W PAD1P33751 242 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
NUP170YBL079W TDA10P42938 290 aa1.97□□□□□ -2.09
NUP170YBL079W CTK2P46962 323 aa1.97□□□□□ -2.09
NUP170YBL079W IMD4P50094 524 aaKnown RBP1.97□□□□□ -2.09
NUP170YBL079W MEP3P53390 489 aa1.97□□□□□ -2.09
NUP170YBL079W YDR286CQ05530 114 aa1.97□□□□□ -2.09
NUP170YBL079W PEX10Q05568 337 aa1.97□□□□□ -2.09
NUP170YBL079W YDR278CQ05612 105 aa1.97□□□□□ -2.09
NUP170YBL079W ATG26Q06321 1198 aa1.97□□□□□ -2.09
NUP170YBL079W THI72Q08579 599 aa1.97□□□□□ -2.09
NUP170YBL079W FIT3Q08907 204 aa1.97□□□□□ -2.09
NUP170YBL079W SOD2P00447 233 aa1.96□□□□□ -2.1
NUP170YBL079W FUR4P05316 633 aaKnown RBP1.96□□□□□ -2.1
NUP170YBL079W DAT1P13483 248 aaKnown RBP1.96□□□□□ -2.1
NUP170YBL079W GAR1P28007 205 aaKnown RBP1.96□□□□□ -2.1
NUP170YBL079W ARO7P32178 256 aa1.96□□□□□ -2.1
NUP170YBL079W YKL187CP34231 750 aa1.96□□□□□ -2.1
NUP170YBL079W SOL3P38858 249 aa1.96□□□□□ -2.1
NUP170YBL079W ALP1P38971 573 aa1.96□□□□□ -2.1
NUP170YBL079W FCY21P40039 528 aa1.96□□□□□ -2.1
NUP170YBL079W TAF4P50105 388 aa1.96□□□□□ -2.1
NUP170YBL079W ORM1P53224 222 aa1.96□□□□□ -2.1
NUP170YBL079W SCW4P53334 386 aaKnown RBP1.96□□□□□ -2.1
NUP170YBL079W HHT1P61830 136 aa1.96□□□□□ -2.1
NUP170YBL079W RIB3Q99258 208 aa1.96□□□□□ -2.1
NUP170YBL079W ADE5,7P07244 802 aaKnown RBP1.96□□□□□ -2.1
NUP170YBL079W RPS16AP0CX51 143 aaKnown RBP1.96□□□□□ -2.1
NUP170YBL079W RPS16BP0CX52 143 aaKnown RBP1.96□□□□□ -2.1
NUP170YBL079W DBF2P22204 572 aa1.96□□□□□ -2.1
NUP170YBL079W CPR5P35176 225 aa1.96□□□□□ -2.1
NUP170YBL079W MRP8P35719 219 aa1.96□□□□□ -2.1
NUP170YBL079W MCH2P36032 473 aa1.96□□□□□ -2.1
NUP170YBL079W EDS1P38073 919 aa1.96□□□□□ -2.1
NUP170YBL079W POP2P39008 433 aa1.96□□□□□ -2.1
NUP170YBL079W PZF1P39933 429 aa1.96□□□□□ -2.1
NUP170YBL079W YER084WP40057 128 aa1.96□□□□□ -2.1
NUP170YBL079W YNL194CP40169 301 aa1.96□□□□□ -2.1
NUP170YBL079W AZF1P41696 914 aa1.96□□□□□ -2.1
NUP170YBL079W YPI1P43587 155 aa1.96□□□□□ -2.1
NUP170YBL079W TMA22P47089 198 aaPredicted RBP1.96□□□□□ -2.1
NUP170YBL079W SSN8P47821 323 aa1.96□□□□□ -2.1
NUP170YBL079W ERV29P53337 310 aa1.96□□□□□ -2.1
NUP170YBL079W RCF1Q03713 159 aa1.96□□□□□ -2.1
NUP170YBL079W TMC1Q08422 150 aaPredicted RBP1.96□□□□□ -2.1
NUP170YBL079W SNX3Q08826 162 aaKnown RBP1.96□□□□□ -2.1
NUP170YBL079W YPR015CQ12531 247 aa1.96□□□□□ -2.1
NUP170YBL079W AHC2P25649 128 aa1.96□□□□□ -2.1
NUP170YBL079W MED8P38304 223 aa1.96□□□□□ -2.1
NUP170YBL079W IPT1P38954 527 aa1.96□□□□□ -2.1
NUP170YBL079W CCS1P40202 249 aaKnown RBP1.96□□□□□ -2.1
NUP170YBL079W YGR045CP53229 120 aa1.96□□□□□ -2.1
NUP170YBL079W PXR1P53335 271 aaPredicted RBP1.96□□□□□ -2.1
NUP170YBL079W YMR317WQ04893 1140 aa1.96□□□□□ -2.1
NUP170YBL079W HOF1Q05080 669 aa1.96□□□□□ -2.1
NUP170YBL079W DST1P07273 309 aa1.96□□□□□ -2.1
NUP170YBL079W YPK2P18961 677 aa1.96□□□□□ -2.1
NUP170YBL079W DPB2P24482 689 aaPredicted RBP1.96□□□□□ -2.1
NUP170YBL079W CDC3P32457 520 aaKnown RBP1.96□□□□□ -2.1
NUP170YBL079W MKS1P34072 584 aa1.96□□□□□ -2.1
NUP170YBL079W UTP30P36144 274 aaKnown RBP1.96□□□□□ -2.1
NUP170YBL079W YBR197CP38306 217 aa1.96□□□□□ -2.1
NUP170YBL079W RSM24Q03976 319 aa1.96□□□□□ -2.1
NUP170YBL079W RIM9Q04734 239 aa1.96□□□□□ -2.1
NUP170YBL079W MIG1P27705 504 aa1.95□□□□□ -2.1
NUP170YBL079W OAC1P32332 324 aa1.95□□□□□ -2.1
NUP170YBL079W YHK8P38776 514 aa1.95□□□□□ -2.1
NUP170YBL079W MPC2P38857 129 aa1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms