RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C COS4P43542 379 aa3.58□□□□□ -1.84
PEX12YMR026C TAD2P47058 250 aa3.58□□□□□ -1.84
PEX12YMR026C NBP1P52919 319 aaPredicted RBP3.58□□□□□ -1.84
PEX12YMR026C SMD1Q02260 146 aaPredicted RBP3.58□□□□□ -1.84
PEX12YMR026C YDR209CQ03480 137 aa3.58□□□□□ -1.84
PEX12YMR026C SNX41Q04053 625 aa3.58□□□□□ -1.84
PEX12YMR026C VBA1Q04301 562 aa3.58□□□□□ -1.84
PEX12YMR026C RFM1Q12192 310 aa3.58□□□□□ -1.84
PEX12YMR026C RRP42Q12277 265 aaPredicted RBP3.58□□□□□ -1.84
PEX12YMR026C ERD1P16151 362 aa3.57□□□□□ -1.84
PEX12YMR026C RPL24BP24000 155 aaKnown RBP3.57□□□□□ -1.84
PEX12YMR026C PBN1P25580 416 aa3.57□□□□□ -1.84
PEX12YMR026C RPB9P27999 122 aa3.57□□□□□ -1.84
PEX12YMR026C SWC4P53201 476 aa3.57□□□□□ -1.84
PEX12YMR026C UTP23Q12339 254 aaKnown RBP3.57□□□□□ -1.84
PEX12YMR026C TCP1P12612 559 aaKnown RBP3.56□□□□□ -1.84
PEX12YMR026C CUP2P15315 225 aa3.56□□□□□ -1.84
PEX12YMR026C RPS5P26783 225 aaKnown RBP3.56□□□□□ -1.84
PEX12YMR026C RME1P32338 300 aaKnown RBP3.56□□□□□ -1.84
PEX12YMR026C MRPL6P32904 214 aa3.56□□□□□ -1.84
PEX12YMR026C YPC1P38298 316 aa3.56□□□□□ -1.84
PEX12YMR026C SLX1P38324 304 aa3.56□□□□□ -1.84
PEX12YMR026C MIC12P38341 106 aa3.56□□□□□ -1.84
PEX12YMR026C DDI1P40087 428 aa3.56□□□□□ -1.84
PEX12YMR026C YRB2P40517 327 aa3.56□□□□□ -1.84
PEX12YMR026C YIL054WP40524 105 aa3.56□□□□□ -1.84
PEX12YMR026C GDS1P41913 522 aa3.56□□□□□ -1.84
PEX12YMR026C CTR3Q06686 241 aa3.56□□□□□ -1.84
PEX12YMR026C GET4Q12125 312 aa3.56□□□□□ -1.84
PEX12YMR026C POF1P25576 258 aa3.55□□□□□ -1.84
PEX12YMR026C INO2P26798 304 aa3.55□□□□□ -1.84
PEX12YMR026C CSE1P33307 960 aa3.55□□□□□ -1.84
PEX12YMR026C CBT1P36038 271 aaPredicted RBP3.55□□□□□ -1.84
PEX12YMR026C PET8P38921 284 aa3.55□□□□□ -1.84
PEX12YMR026C CDC14Q00684 551 aa3.55□□□□□ -1.84
PEX12YMR026C TFC7Q12415 435 aa3.55□□□□□ -1.84
PEX12YMR026C SNF8Q12483 233 aa3.55□□□□□ -1.84
PEX12YMR026C YPR064WQ12492 139 aa3.55□□□□□ -1.84
PEX12YMR026C BI3Q9ZZW7 517 aa3.55□□□□□ -1.84
PEX12YMR026C THP2O13539 261 aaKnown RBP3.54□□□□□ -1.84
PEX12YMR026C CDC33P07260 213 aaKnown RBP3.54□□□□□ -1.84
PEX12YMR026C YPK2P18961 677 aa3.54□□□□□ -1.84
PEX12YMR026C APA2P22108 325 aa3.54□□□□□ -1.84
PEX12YMR026C VMA6P32366 345 aaKnown RBP3.54□□□□□ -1.84
PEX12YMR026C ARC19P33204 171 aaKnown RBP3.54□□□□□ -1.84
PEX12YMR026C PRP18P33411 251 aaPredicted RBP3.54□□□□□ -1.84
PEX12YMR026C RIB1P38066 345 aa3.54□□□□□ -1.84
PEX12YMR026C PRS2P38620 318 aaKnown RBP3.54□□□□□ -1.84
PEX12YMR026C RFC4P40339 323 aaKnown RBP3.54□□□□□ -1.84
PEX12YMR026C YIL059CP40520 121 aa3.54□□□□□ -1.84
PEX12YMR026C YGL118CP53132 145 aa3.54□□□□□ -1.84
PEX12YMR026C SNZ1Q03148 297 aa3.54□□□□□ -1.84
PEX12YMR026C DCR2Q05924 578 aa3.54□□□□□ -1.84
PEX12YMR026C SPO77Q06134 477 aa3.54□□□□□ -1.84
PEX12YMR026C YRA1Q12159 226 aaKnown RBP3.54□□□□□ -1.84
PEX12YMR026C YPL245WQ12179 454 aaKnown RBP3.54□□□□□ -1.84
PEX12YMR026C RAD9P14737 1309 aa3.53□□□□□ -1.84
PEX12YMR026C MATALPHA2P0CY08 210 aa3.53□□□□□ -1.84
PEX12YMR026C HMLALPHA2P0CY09 210 aa3.53□□□□□ -1.84
PEX12YMR026C TFS1P14306 219 aa3.53□□□□□ -1.84
PEX12YMR026C CBF1P17106 351 aa3.53□□□□□ -1.84
PEX12YMR026C STE18P18852 110 aa3.53□□□□□ -1.84
PEX12YMR026C MRPL20P22354 195 aaPredicted RBP3.53□□□□□ -1.84
PEX12YMR026C SPT4P32914 102 aaPredicted RBP3.53□□□□□ -1.84
PEX12YMR026C ASG7P46993 209 aa3.53□□□□□ -1.84
PEX12YMR026C YJR012CP47087 207 aa3.53□□□□□ -1.84
PEX12YMR026C PEX31P53203 462 aa3.53□□□□□ -1.84
PEX12YMR026C CAX4P53223 239 aa3.53□□□□□ -1.84
PEX12YMR026C YNR066CP53752 436 aa3.53□□□□□ -1.84
PEX12YMR026C KRE28Q04431 385 aa3.53□□□□□ -1.84
PEX12YMR026C TAZ1Q06510 381 aa3.53□□□□□ -1.84
PEX12YMR026C PER33Q12144 273 aa3.53□□□□□ -1.84
PEX12YMR026C TRM10Q12400 293 aa3.53□□□□□ -1.84
PEX12YMR026C RNA15P25299 296 aaPredicted RBP3.52□□□□□ -1.85
PEX12YMR026C MCH2P36032 473 aa3.52□□□□□ -1.85
PEX12YMR026C RTC3P38804 111 aaPredicted RBP3.52□□□□□ -1.85
PEX12YMR026C SOP4P39543 234 aaPredicted RBP3.52□□□□□ -1.85
PEX12YMR026C ERG28P40030 148 aa3.52□□□□□ -1.85
PEX12YMR026C THO1P40040 218 aaKnown RBP3.52□□□□□ -1.85
PEX12YMR026C RPL10P41805 221 aaKnown RBP3.52□□□□□ -1.85
PEX12YMR026C HAM1P47119 197 aaKnown RBP3.52□□□□□ -1.85
PEX12YMR026C UBC13P52490 153 aa3.52□□□□□ -1.85
PEX12YMR026C CUS2P53830 285 aaPredicted RBP3.52□□□□□ -1.85
PEX12YMR026C YNL040WP53960 456 aaPredicted RBP3.52□□□□□ -1.85
PEX12YMR026C SFH1Q06168 426 aa3.52□□□□□ -1.85
PEX12YMR026C SMD2Q06217 110 aaKnown RBP3.52□□□□□ -1.85
PEX12YMR026C JIP3O13555 125 aa3.51□□□□□ -1.85
PEX12YMR026C POX1P13711 748 aa3.51□□□□□ -1.85
PEX12YMR026C YNL194CP40169 301 aa3.51□□□□□ -1.85
PEX12YMR026C LIF1P53150 421 aa3.51□□□□□ -1.85
PEX12YMR026C EBS1Q03466 884 aaKnown RBP3.51□□□□□ -1.85
PEX12YMR026C SEC13Q04491 297 aaKnown RBP3.51□□□□□ -1.85
PEX12YMR026C SEY1Q99287 776 aa3.51□□□□□ -1.85
PEX12YMR026C YMR31P19955 123 aa3.5□□□□□ -1.85
PEX12YMR026C MRX3P38172 270 aa3.5□□□□□ -1.85
PEX12YMR026C ATG12P38316 186 aa3.5□□□□□ -1.85
PEX12YMR026C ASP1P38986 381 aaPredicted RBP3.5□□□□□ -1.85
PEX12YMR026C HOC1P47124 396 aa3.5□□□□□ -1.85
PEX12YMR026C YNL095CP53932 642 aa3.5□□□□□ -1.85
PEX12YMR026C YMR226CQ05016 267 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 43.2 ms