RNA–Protein interactions for RNA: YKL138C-A

HSK3, Transcript of Essential subunit of the Dam1 complex (aka DASH complex), yeastyeast

Gene HSK3, Length 210 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSK3YKL138C-A TIR4Q12218 487 aaPredicted RBP1.54□□□□□ -2.16
HSK3YKL138C-A SNF8Q12483 233 aa1.54□□□□□ -2.16
HSK3YKL138C-A CPT1P17898 393 aa1.53□□□□□ -2.16
HSK3YKL138C-A COX10P21592 462 aa1.53□□□□□ -2.16
HSK3YKL138C-A RNA15P25299 296 aaPredicted RBP1.53□□□□□ -2.16
HSK3YKL138C-A POF1P25576 258 aa1.53□□□□□ -2.16
HSK3YKL138C-A ERG2P32352 222 aa1.53□□□□□ -2.16
HSK3YKL138C-A IME2P32581 645 aa1.53□□□□□ -2.16
HSK3YKL138C-A STH1P32597 1359 aa1.53□□□□□ -2.16
HSK3YKL138C-A CAT2P32796 670 aaKnown RBP1.53□□□□□ -2.16
HSK3YKL138C-A RPT5P33297 434 aaKnown RBP1.53□□□□□ -2.16
HSK3YKL138C-A FZO1P38297 855 aa1.53□□□□□ -2.16
HSK3YKL138C-A PHO89P38361 574 aa1.53□□□□□ -2.16
HSK3YKL138C-A BDH1P39714 382 aa1.53□□□□□ -2.16
HSK3YKL138C-A DSN1P40568 576 aa1.53□□□□□ -2.16
HSK3YKL138C-A GCN20P43535 752 aaKnown RBP1.53□□□□□ -2.16
HSK3YKL138C-A AGX1P43567 385 aa1.53□□□□□ -2.16
HSK3YKL138C-A YJL118WP47022 219 aa1.53□□□□□ -2.16
HSK3YKL138C-A SLX9P53251 210 aaPredicted RBP1.53□□□□□ -2.16
HSK3YKL138C-A HST4P53688 370 aa1.53□□□□□ -2.16
HSK3YKL138C-A YNL134CP53912 376 aaKnown RBP1.53□□□□□ -2.16
HSK3YKL138C-A YNL040WP53960 456 aaPredicted RBP1.53□□□□□ -2.16
HSK3YKL138C-A ACT1P60010 375 aaKnown RBP1.53□□□□□ -2.16
HSK3YKL138C-A PET117Q02771 107 aa1.53□□□□□ -2.16
HSK3YKL138C-A YPL113CQ02961 396 aa1.53□□□□□ -2.16
HSK3YKL138C-A OST6Q03723 332 aa1.53□□□□□ -2.16
HSK3YKL138C-A NNT1Q05874 261 aa1.53□□□□□ -2.16
HSK3YKL138C-A CWP1P28319 239 aa1.52□□□□□ -2.17
HSK3YKL138C-A YBR062CP38239 180 aa1.52□□□□□ -2.17
HSK3YKL138C-A MED8P38304 223 aa1.52□□□□□ -2.17
HSK3YKL138C-A TCD1P38756 429 aa1.52□□□□□ -2.17
HSK3YKL138C-A YHR045WP38775 560 aa1.52□□□□□ -2.17
HSK3YKL138C-A BIG1P38813 335 aa1.52□□□□□ -2.17
HSK3YKL138C-A AVT7P40501 490 aa1.52□□□□□ -2.17
HSK3YKL138C-A YIL012WP40551 113 aa1.52□□□□□ -2.17
HSK3YKL138C-A SYS1P41544 203 aa1.52□□□□□ -2.17
HSK3YKL138C-A BUD13P46947 266 aaPredicted RBP1.52□□□□□ -2.17
HSK3YKL138C-A RPE1P46969 238 aa1.52□□□□□ -2.17
HSK3YKL138C-A NBP35P52920 328 aa1.52□□□□□ -2.17
HSK3YKL138C-A UFD1P53044 361 aa1.52□□□□□ -2.17
HSK3YKL138C-A MAL13P53338 473 aa1.52□□□□□ -2.17
HSK3YKL138C-A MRS2Q01926 470 aa1.52□□□□□ -2.17
HSK3YKL138C-A SMD1Q02260 146 aaPredicted RBP1.52□□□□□ -2.17
HSK3YKL138C-A SDC1Q03323 175 aa1.52□□□□□ -2.17
HSK3YKL138C-A CWC21Q03375 135 aaKnown RBP1.52□□□□□ -2.17
HSK3YKL138C-A TVP15Q03860 143 aa1.52□□□□□ -2.17
HSK3YKL138C-A DXO1Q06349 442 aa1.52□□□□□ -2.17
HSK3YKL138C-A ATG17Q06410 417 aa1.52□□□□□ -2.17
HSK3YKL138C-A ARV1Q06541 321 aa1.52□□□□□ -2.17
HSK3YKL138C-A IES4Q08561 116 aa1.52□□□□□ -2.17
HSK3YKL138C-A YDL211CQ12121 372 aa1.52□□□□□ -2.17
HSK3YKL138C-A YPL150WQ12152 901 aa1.52□□□□□ -2.17
HSK3YKL138C-A SNU23Q12368 194 aaPredicted RBP1.52□□□□□ -2.17
HSK3YKL138C-A ATG31Q12421 196 aa1.52□□□□□ -2.17
HSK3YKL138C-A FLO11P08640 1367 aa1.51□□□□□ -2.17
HSK3YKL138C-A YEL009C-AA0A023PZF2 135 aa1.51□□□□□ -2.17
HSK3YKL138C-A RPP0P05317 312 aaKnown RBP1.51□□□□□ -2.17
HSK3YKL138C-A YOL163WP0CF20 169 aa1.51□□□□□ -2.17
HSK3YKL138C-A POX1P13711 748 aa1.51□□□□□ -2.17
HSK3YKL138C-A YCR016WP25617 290 aaKnown RBP1.51□□□□□ -2.17
HSK3YKL138C-A RPB9P27999 122 aa1.51□□□□□ -2.17
HSK3YKL138C-A BMH1P29311 267 aaKnown RBP1.51□□□□□ -2.17
HSK3YKL138C-A NTG1P31378 399 aa1.51□□□□□ -2.17
HSK3YKL138C-A AST1P35183 429 aa1.51□□□□□ -2.17
HSK3YKL138C-A SKI2P35207 1287 aaKnown RBP RIP-Chip data1.51□□□□□ -2.17not detected
HSK3YKL138C-A POP8P38208 133 aa1.51□□□□□ -2.17
HSK3YKL138C-A YER085CP40058 173 aa1.51□□□□□ -2.17
HSK3YKL138C-A SWT21P53873 357 aaPredicted RBP1.51□□□□□ -2.17
HSK3YKL138C-A SWS2P53937 143 aa1.51□□□□□ -2.17
HSK3YKL138C-A RNH1Q04740 348 aa1.51□□□□□ -2.17
HSK3YKL138C-A PEX10Q05568 337 aa1.51□□□□□ -2.17
HSK3YKL138C-A YPL264CQ08980 353 aa1.51□□□□□ -2.17
HSK3YKL138C-A MSH5Q12175 901 aa1.51□□□□□ -2.17
HSK3YKL138C-A RFM1Q12192 310 aa1.51□□□□□ -2.17
HSK3YKL138C-A IES3Q12345 250 aa1.51□□□□□ -2.17
HSK3YKL138C-A AI5_BETAQ9ZZX0 354 aa1.51□□□□□ -2.17
HSK3YKL138C-A YAK1P14680 807 aa1.5□□□□□ -2.17
HSK3YKL138C-A ATG15P25641 520 aa1.5□□□□□ -2.17
HSK3YKL138C-A HOM6P31116 359 aaKnown RBP1.5□□□□□ -2.17
HSK3YKL138C-A QRI5P32344 111 aa1.5□□□□□ -2.17
HSK3YKL138C-A ARO4P32449 370 aaKnown RBP1.5□□□□□ -2.17
HSK3YKL138C-A TRM7P38238 310 aaKnown RBP1.5□□□□□ -2.17
HSK3YKL138C-A BFR1P38934 470 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
HSK3YKL138C-A THO1P40040 218 aaKnown RBP1.5□□□□□ -2.17
HSK3YKL138C-A SER33P40510 469 aa1.5□□□□□ -2.17
HSK3YKL138C-A YFR045WP43617 309 aa1.5□□□□□ -2.17
HSK3YKL138C-A HSH155P49955 971 aaKnown RBP1.5□□□□□ -2.17
HSK3YKL138C-A USE1P53146 245 aa1.5□□□□□ -2.17
HSK3YKL138C-A ZRG17P53735 605 aa1.5□□□□□ -2.17
HSK3YKL138C-A AAH1P53909 347 aa1.5□□□□□ -2.17
HSK3YKL138C-A YNL095CP53932 642 aa1.5□□□□□ -2.17
HSK3YKL138C-A ASI3P53983 676 aa1.5□□□□□ -2.17
HSK3YKL138C-A EBS1Q03466 884 aaKnown RBP1.5□□□□□ -2.17
HSK3YKL138C-A YPR098CQ06089 161 aa1.5□□□□□ -2.17
HSK3YKL138C-A SGT2Q12118 346 aaKnown RBP1.5□□□□□ -2.17
HSK3YKL138C-A YPR063CQ12160 140 aa1.5□□□□□ -2.17
HSK3YKL138C-A YCT1Q12235 531 aa1.5□□□□□ -2.17
HSK3YKL138C-A YOR029WQ12243 111 aa1.5□□□□□ -2.17
HSK3YKL138C-A SMT3Q12306 101 aaKnown RBP1.5□□□□□ -2.17
HSK3YKL138C-A YPL119C-AQ3E751 87 aa1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 47.2 ms