RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	NOP1	P15646	327 aa	Known RBP	4.43	□□□□□ -1.7
SIR2	YDL042C	UGA1	P17649	471 aa		4.43	□□□□□ -1.7
SIR2	YDL042C	RPL5	P26321	297 aa	Known RBP	4.43	□□□□□ -1.7
SIR2	YDL042C	RRT13	P40042	185 aa		4.43	□□□□□ -1.7
SIR2	YDL042C	HIT1	P46973	164 aa		4.43	□□□□□ -1.7
SIR2	YDL042C	SPO19	Q03029	223 aa		4.43	□□□□□ -1.7
SIR2	YDL042C	SNX41	Q04053	625 aa		4.43	□□□□□ -1.7
SIR2	YDL042C	RAX2	Q12465	1220 aa		4.43	□□□□□ -1.7
SIR2	YDL042C	RAD50	P12753	1312 aa		4.42	□□□□□ -1.7
SIR2	YDL042C	RAD7	P06779	565 aa		4.42	□□□□□ -1.7
SIR2	YDL042C	PUT4	P15380	627 aa		4.42	□□□□□ -1.7
SIR2	YDL042C	ERD1	P16151	362 aa		4.42	□□□□□ -1.7
SIR2	YDL042C	RPC25	P35718	212 aa		4.42	□□□□□ -1.7
SIR2	YDL042C	APC4	Q04601	652 aa		4.42	□□□□□ -1.7
SIR2	YDL042C	YLR413W	Q06689	675 aa		4.42	□□□□□ -1.7
SIR2	YDL042C	BSC6	Q08280	497 aa		4.42	□□□□□ -1.7
SIR2	YDL042C	YPQ1	Q12010	308 aa		4.42	□□□□□ -1.7
SIR2	YDL042C	TUS1	Q06412	1307 aa		4.42	□□□□□ -1.7
SIR2	YDL042C	GAL7	P08431	366 aa		4.41	□□□□□ -1.7
SIR2	YDL042C	RCK1	P38622	512 aa		4.41	□□□□□ -1.7
SIR2	YDL042C	GPI8	P49018	411 aa		4.41	□□□□□ -1.7
SIR2	YDL042C	YGR266W	P53326	701 aa		4.41	□□□□□ -1.7
SIR2	YDL042C	SED5	Q01590	340 aa		4.41	□□□□□ -1.7
SIR2	YDL042C	ECM18	Q04623	453 aa		4.41	□□□□□ -1.7
SIR2	YDL042C	SIA1	Q12212	622 aa		4.41	□□□□□ -1.7
SIR2	YDL042C	RPC40	P07703	335 aa	Known RBP	4.41	□□□□□ -1.7
SIR2	YDL042C	TIP20	P33891	701 aa		4.41	□□□□□ -1.7
SIR2	YDL042C	YFL012W	P43580	148 aa		4.41	□□□□□ -1.7
SIR2	YDL042C	COX16	P47081	118 aa		4.41	□□□□□ -1.7
SIR2	YDL042C	EGD1	Q02642	157 aa	Known RBP	4.41	□□□□□ -1.7
SIR2	YDL042C	YOL029C	Q08187	201 aa		4.41	□□□□□ -1.7
SIR2	YDL042C	UTP23	Q12339	254 aa	Known RBP	4.41	□□□□□ -1.7
SIR2	YDL042C	MRPL23	Q12487	163 aa	Predicted RBP	4.41	□□□□□ -1.7
SIR2	YDL042C	YOL085C	Q99345	113 aa		4.41	□□□□□ -1.7
SIR2	YDL042C	YMR262W	P38430	313 aa		4.4	□□□□□ -1.71
SIR2	YDL042C	PET8	P38921	284 aa		4.4	□□□□□ -1.71
SIR2	YDL042C	GCD14	P46959	383 aa	Predicted RBP	4.4	□□□□□ -1.71
SIR2	YDL042C	BIO4	P53630	237 aa		4.4	□□□□□ -1.71
SIR2	YDL042C	TIR4	Q12218	487 aa	Predicted RBP	4.4	□□□□□ -1.71
SIR2	YDL042C	YAL067W-A	Q8TGK6	75 aa		4.4	□□□□□ -1.71
SIR2	YDL042C	SOP4	P39543	234 aa	Predicted RBP	4.39	□□□□□ -1.71
SIR2	YDL042C	ECM11	Q04110	302 aa		4.39	□□□□□ -1.71
SIR2	YDL042C	ERV41	Q04651	352 aa		4.39	□□□□□ -1.71
SIR2	YDL042C	YDR018C	Q12185	396 aa		4.39	□□□□□ -1.71
SIR2	YDL042C	CYM1	P32898	989 aa		4.38	□□□□□ -1.71
SIR2	YDL042C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.38	□□□□□ -1.71	not detected
SIR2	YDL042C	SDS23	P53172	527 aa		4.38	□□□□□ -1.71
SIR2	YDL042C	PIN3	Q06449	215 aa		4.38	□□□□□ -1.71
SIR2	YDL042C	MIM1	Q08176	113 aa		4.38	□□□□□ -1.71
SIR2	YDL042C	MRPL20	P22354	195 aa	Predicted RBP	4.38	□□□□□ -1.71
SIR2	YDL042C	INO2	P26798	304 aa		4.38	□□□□□ -1.71
SIR2	YDL042C	MCH2	P36032	473 aa		4.38	□□□□□ -1.71
SIR2	YDL042C	SWD2	P36104	329 aa	Predicted RBP	4.38	□□□□□ -1.71
SIR2	YDL042C	YER184C	P39961	794 aa		4.38	□□□□□ -1.71
SIR2	YDL042C	MYO5	Q04439	1219 aa	Known RBP	4.38	□□□□□ -1.71
SIR2	YDL042C	APC9	Q12107	265 aa		4.38	□□□□□ -1.71
SIR2	YDL042C	YPL245W	Q12179	454 aa	Known RBP	4.38	□□□□□ -1.71
SIR2	YDL042C	IZH4	Q99393	312 aa		4.38	□□□□□ -1.71
SIR2	YDL042C	GPI12	P23797	304 aa		4.37	□□□□□ -1.71
SIR2	YDL042C	YKL187C	P34231	750 aa		4.37	□□□□□ -1.71
SIR2	YDL042C	EBP2	P36049	427 aa	Known RBP	4.37	□□□□□ -1.71
SIR2	YDL042C	CTM1	P38818	585 aa		4.37	□□□□□ -1.71
SIR2	YDL042C	VAB2	P40003	282 aa		4.37	□□□□□ -1.71
SIR2	YDL042C	YGL185C	P53100	379 aa		4.37	□□□□□ -1.71
SIR2	YDL042C	FLC3	P53121	802 aa		4.37	□□□□□ -1.71
SIR2	YDL042C	INP1	Q03694	420 aa		4.37	□□□□□ -1.71
SIR2	YDL042C	INP2	Q03824	705 aa		4.37	□□□□□ -1.71
SIR2	YDL042C	BI3	Q9ZZW7	517 aa		4.37	□□□□□ -1.71
SIR2	YDL042C	RPL16B	P26785	198 aa	Known RBP	4.36	□□□□□ -1.71
SIR2	YDL042C	VPS45	P38932	577 aa		4.36	□□□□□ -1.71
SIR2	YDL042C	FMP48	P53233	369 aa		4.36	□□□□□ -1.71
SIR2	YDL042C	YMR244W	Q04018	355 aa		4.36	□□□□□ -1.71
SIR2	YDL042C	TY3A-G	Q12173	290 aa		4.36	□□□□□ -1.71
SIR2	YDL042C	YBL111C	Q3E7Y5	667 aa		4.36	□□□□□ -1.71
SIR2	YDL042C	TY3A-I	Q99219	290 aa		4.36	□□□□□ -1.71
SIR2	YDL042C	VPS13	Q07878	3144 aa		4.36	□□□□□ -1.71
SIR2	YDL042C	RPL31A	P0C2H8	113 aa	Known RBP	4.35	□□□□□ -1.71
SIR2	YDL042C	CSM1	P25651	190 aa		4.35	□□□□□ -1.71
SIR2	YDL042C	DBP7	P36120	742 aa	Known RBP	4.35	□□□□□ -1.71
SIR2	YDL042C	RFT1	P38206	574 aa	Predicted RBP	4.35	□□□□□ -1.71
SIR2	YDL042C	SWC4	P53201	476 aa		4.35	□□□□□ -1.71
SIR2	YDL042C	YNR066C	P53752	436 aa		4.35	□□□□□ -1.71
SIR2	YDL042C	YNL260C	P53846	198 aa		4.35	□□□□□ -1.71
SIR2	YDL042C	UTP15	Q04305	513 aa	Known RBP	4.35	□□□□□ -1.71
SIR2	YDL042C	MAK31	P23059	88 aa		4.35	□□□□□ -1.71
SIR2	YDL042C	MEK1	P24719	497 aa	Predicted RBP	4.35	□□□□□ -1.71
SIR2	YDL042C	YGR067C	P53243	804 aa		4.35	□□□□□ -1.71
SIR2	YDL042C	PHO88	P38264	188 aa	Predicted RBP	4.34	□□□□□ -1.71
SIR2	YDL042C	MEP1	P40260	492 aa		4.34	□□□□□ -1.71
SIR2	YDL042C	GTO1	P48239	356 aa		4.34	□□□□□ -1.71
SIR2	YDL042C	COQ5	P49017	307 aa		4.34	□□□□□ -1.71
SIR2	YDL042C	KEL2	P50090	882 aa		4.34	□□□□□ -1.71
SIR2	YDL042C	BCP1	Q06338	283 aa		4.34	□□□□□ -1.71
SIR2	YDL042C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.33	□□□□□ -1.72	not detected
SIR2	YDL042C	PPQ1	P32945	549 aa		4.33	□□□□□ -1.72
SIR2	YDL042C	YKL070W	P36087	169 aa		4.33	□□□□□ -1.72
SIR2	YDL042C	YPC1	P38298	316 aa		4.33	□□□□□ -1.72
SIR2	YDL042C	HIS2	P38635	335 aa		4.33	□□□□□ -1.72
SIR2	YDL042C	RTT105	P40063	208 aa		4.33	□□□□□ -1.72
SIR2	YDL042C	SLM1	P40485	686 aa		4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms