RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeastyeast

Gene SHR5, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR5YOL110W ENA5Q12691 1091 aa13.12□□□□□ -0.31
SHR5YOL110W YKL071WP36086 256 aa13.11□□□□□ -0.31
SHR5YOL110W YHR035WP38769 630 aa13.11□□□□□ -0.31
SHR5YOL110W MDM31P38880 579 aa13.11□□□□□ -0.31
SHR5YOL110W SAM37P50110 327 aa13.11□□□□□ -0.31
SHR5YOL110W COS10P52924 374 aa13.11□□□□□ -0.31
SHR5YOL110W NUP49Q02199 472 aa13.11□□□□□ -0.31
SHR5YOL110W FIN1Q03898 291 aa13.11□□□□□ -0.31
SHR5YOL110W YMR087WQ04299 284 aa13.11□□□□□ -0.31
SHR5YOL110W YOL024WQ08172 172 aa13.11□□□□□ -0.31
SHR5YOL110W HNT3Q08702 217 aa13.11□□□□□ -0.31
SHR5YOL110W RRG7Q08774 242 aaPredicted RBP13.11□□□□□ -0.31
SHR5YOL110W YDL177CQ12257 170 aa13.11□□□□□ -0.31
SHR5YOL110W GLT1Q12680 2145 aaKnown RBP13.11□□□□□ -0.31
SHR5YOL110W PRE2P30656 287 aaKnown RBP13.1□□□□□ -0.31
SHR5YOL110W NIC96P34077 839 aa13.1□□□□□ -0.31
SHR5YOL110W TPO5P36029 618 aa13.1□□□□□ -0.31
SHR5YOL110W FET3P38993 636 aa13.1□□□□□ -0.31
SHR5YOL110W SPC19Q03954 165 aa13.1□□□□□ -0.31
SHR5YOL110W PLM2Q04383 521 aa13.1□□□□□ -0.31
SHR5YOL110W NEJ1Q06148 342 aa13.1□□□□□ -0.31
SHR5YOL110W COQ10Q08058 207 aa13.1□□□□□ -0.31
SHR5YOL110W MDM32Q12171 622 aa13.1□□□□□ -0.31
SHR5YOL110W HER1Q12276 1246 aa13.1□□□□□ -0.31
SHR5YOL110W PNS1Q12412 539 aa13.1□□□□□ -0.31
SHR5YOL110W MET2P08465 486 aa13.09□□□□□ -0.31
SHR5YOL110W NUD1P32336 851 aa13.09□□□□□ -0.31
SHR5YOL110W NDC1P32500 655 aa13.09□□□□□ -0.31
SHR5YOL110W TRS65P32893 560 aa13.09□□□□□ -0.31
SHR5YOL110W PDR3P33200 976 aa13.09□□□□□ -0.31
SHR5YOL110W YKR073CP36153 106 aa13.09□□□□□ -0.31
SHR5YOL110W RIX1P38883 763 aaPredicted RBP13.09□□□□□ -0.31
SHR5YOL110W IES5P40060 125 aa13.09□□□□□ -0.31
SHR5YOL110W NTA1P40354 457 aa13.09□□□□□ -0.31
SHR5YOL110W PRP3Q03338 469 aaPredicted RBP13.09□□□□□ -0.31
SHR5YOL110W YDR209CQ03480 137 aa13.09□□□□□ -0.31
SHR5YOL110W SNX41Q04053 625 aa13.09□□□□□ -0.31
SHR5YOL110W EMG1Q06287 252 aaKnown RBP13.09□□□□□ -0.31
SHR5YOL110W HDA2Q06629 674 aa13.09□□□□□ -0.31
SHR5YOL110W NTG2Q08214 380 aa13.09□□□□□ -0.31
SHR5YOL110W BTS1Q12051 335 aa13.09□□□□□ -0.31
SHR5YOL110W RLM1Q12224 676 aa13.09□□□□□ -0.31
SHR5YOL110W PCL9Q12477 304 aa13.09□□□□□ -0.31
SHR5YOL110W YHR214C-DP0CX93 97 aa13.08□□□□□ -0.32
SHR5YOL110W PHO80P20052 293 aa13.08□□□□□ -0.32
SHR5YOL110W ERG8P24521 451 aa13.08□□□□□ -0.32
SHR5YOL110W IRC7P43623 340 aa13.08□□□□□ -0.32
SHR5YOL110W RPE1P46969 238 aa13.08□□□□□ -0.32
SHR5YOL110W VPS73P53142 486 aaKnown RBP13.08□□□□□ -0.32
SHR5YOL110W MNT4P53745 580 aa13.08□□□□□ -0.32
SHR5YOL110W PDR16P53860 351 aaKnown RBP13.08□□□□□ -0.32
SHR5YOL110W PGA1P53896 198 aa13.08□□□□□ -0.32
SHR5YOL110W UTP21Q06078 939 aaPredicted RBP13.08□□□□□ -0.32
SHR5YOL110W AIM17P23180 465 aaKnown RBP13.07□□□□□ -0.32
SHR5YOL110W EHD3P28817 500 aa13.07□□□□□ -0.32
SHR5YOL110W YEF1P32622 495 aa13.07□□□□□ -0.32
SHR5YOL110W RPP1P38786 293 aa13.07□□□□□ -0.32
SHR5YOL110W YER010CP40011 234 aa13.07□□□□□ -0.32
SHR5YOL110W BUR6P40096 142 aa13.07□□□□□ -0.32
SHR5YOL110W EFM3P47163 339 aa13.07□□□□□ -0.32
SHR5YOL110W PGU1P47180 361 aa13.07□□□□□ -0.32
SHR5YOL110W OGG1P53397 376 aaPredicted RBP13.07□□□□□ -0.32
SHR5YOL110W MPP6P53725 186 aaPredicted RBP13.07□□□□□ -0.32
SHR5YOL110W COX20Q04935 205 aa13.07□□□□□ -0.32
SHR5YOL110W RDR1Q08904 546 aa13.07□□□□□ -0.32
SHR5YOL110W YRA1Q12159 226 aaKnown RBP13.07□□□□□ -0.32
SHR5YOL110W RAS1P01119 309 aa13.06□□□□□ -0.32
SHR5YOL110W MDH1P17505 334 aaKnown RBP RIP-Chip data13.06□□□□□ -0.32not detected
SHR5YOL110W SUR1P33300 382 aa13.06□□□□□ -0.32
SHR5YOL110W MSN4P33749 630 aa13.06□□□□□ -0.32
SHR5YOL110W KAE1P36132 386 aa13.06□□□□□ -0.32
SHR5YOL110W BAP2P38084 609 aa13.06□□□□□ -0.32
SHR5YOL110W AIM10P39965 576 aaKnown RBP13.06□□□□□ -0.32
SHR5YOL110W ECO1P43605 281 aa13.06□□□□□ -0.32
SHR5YOL110W SSY5P47002 699 aa13.06□□□□□ -0.32
SHR5YOL110W HOL1P53389 586 aa13.06□□□□□ -0.32
SHR5YOL110W GIS1Q03833 894 aa13.06□□□□□ -0.32
SHR5YOL110W MIX14Q04341 121 aa13.06□□□□□ -0.32
SHR5YOL110W MRX10Q05648 414 aa13.06□□□□□ -0.32
SHR5YOL110W IRC19Q07843 230 aa13.06□□□□□ -0.32
SHR5YOL110W YOR289WQ12012 251 aaPredicted RBP13.06□□□□□ -0.32
SHR5YOL110W RBD2Q12270 262 aa13.06□□□□□ -0.32
SHR5YOL110W SEC24P40482 926 aaKnown RBP13.05□□□□□ -0.32
SHR5YOL110W IRC5P43610 853 aa13.05□□□□□ -0.32
SHR5YOL110W YLR346CQ06139 101 aa13.05□□□□□ -0.32
SHR5YOL110W FMP45Q07651 309 aa13.05□□□□□ -0.32
SHR5YOL110W SET6Q12529 373 aa13.05□□□□□ -0.32
SHR5YOL110W MTR10Q99189 972 aa13.05□□□□□ -0.32
SHR5YOL110W RPL5P26321 297 aaKnown RBP13.04□□□□□ -0.32
SHR5YOL110W MDH3P32419 343 aaKnown RBP RIP-Chip data13.04□□□□□ -0.32not detected
SHR5YOL110W REE1P40893 198 aa13.04□□□□□ -0.32
SHR5YOL110W VNX1P42839 908 aa13.04□□□□□ -0.32
SHR5YOL110W RRN9P53437 365 aa13.04□□□□□ -0.32
SHR5YOL110W MRPL1Q04599 285 aa13.04□□□□□ -0.32
SHR5YOL110W HRT1Q08273 121 aa13.04□□□□□ -0.32
SHR5YOL110W MSL5Q12186 476 aaKnown RBP RIP-Chip data13.04□□□□□ -0.32not detected
SHR5YOL110W SWM1Q12379 170 aa13.04□□□□□ -0.32
SHR5YOL110W PEP4P07267 405 aaKnown RBP13.03□□□□□ -0.32
SHR5YOL110W RPB8P20436 146 aa13.03□□□□□ -0.32
SHR5YOL110W MRPL16P38064 232 aa13.03□□□□□ -0.32
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms