RNA–Protein interactions for RNA: YDR295C

HDA2, Transcript of Subunit of the HDA1 histone deacetylase complex, yeastyeast

Gene HDA2, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA2YDR295C PRP38Q00723 242 aaPredicted RBP3.19□□□□□ -1.9
HDA2YDR295C LGE1Q02796 332 aaKnown RBP3.19□□□□□ -1.9
HDA2YDR295C GIP3Q03016 1276 aa3.19□□□□□ -1.9
HDA2YDR295C SPC24Q04477 213 aa3.19□□□□□ -1.9
HDA2YDR295C PEX10Q05568 337 aa3.19□□□□□ -1.9
HDA2YDR295C NDE2Q07500 545 aa3.19□□□□□ -1.9
HDA2YDR295C LDS2Q08218 356 aa3.19□□□□□ -1.9
HDA2YDR295C YOR387CQ08910 206 aa3.19□□□□□ -1.9
HDA2YDR295C RAD52P06778 471 aaKnown RBP3.19□□□□□ -1.9
HDA2YDR295C SLM5P25345 492 aaKnown RBP3.19□□□□□ -1.9
HDA2YDR295C RPS2P25443 254 aaKnown RBP3.19□□□□□ -1.9
HDA2YDR295C FUN19P28003 413 aaPredicted RBP3.19□□□□□ -1.9
HDA2YDR295C NUP2P32499 720 aa3.19□□□□□ -1.9
HDA2YDR295C HMT1P38074 348 aa3.19□□□□□ -1.9
HDA2YDR295C BMT2P38278 337 aa3.19□□□□□ -1.9
HDA2YDR295C SRP14P38985 146 aa3.19□□□□□ -1.9
HDA2YDR295C YAL037WP39728 267 aa3.19□□□□□ -1.9
HDA2YDR295C SHO1P40073 367 aa3.19□□□□□ -1.9
HDA2YDR295C JLP2P40206 208 aa3.19□□□□□ -1.9
HDA2YDR295C ALG8P40351 577 aa3.19□□□□□ -1.9
HDA2YDR295C CFD1P40558 293 aa3.19□□□□□ -1.9
HDA2YDR295C TRS85P46944 698 aa3.19□□□□□ -1.9
HDA2YDR295C AZR1P50080 613 aa3.19□□□□□ -1.9
HDA2YDR295C RPL15BP54780 204 aaPredicted RBP3.19□□□□□ -1.9
HDA2YDR295C DIG1Q03063 452 aaKnown RBP3.19□□□□□ -1.9
HDA2YDR295C YDL218WQ07629 317 aa3.19□□□□□ -1.9
HDA2YDR295C ALE1Q08548 619 aa3.19□□□□□ -1.9
HDA2YDR295C PER33Q12144 273 aa3.19□□□□□ -1.9
HDA2YDR295C HIS1P00498 297 aaKnown RBP3.18□□□□□ -1.9
HDA2YDR295C PAB1P04147 577 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
HDA2YDR295C TYR1P20049 452 aa3.18□□□□□ -1.9
HDA2YDR295C CHA1P25379 360 aaKnown RBP3.18□□□□□ -1.9
HDA2YDR295C MNS1P32906 549 aa3.18□□□□□ -1.9
HDA2YDR295C SKN1P33336 771 aa3.18□□□□□ -1.9
HDA2YDR295C PRX1P34227 261 aaKnown RBP3.18□□□□□ -1.9
HDA2YDR295C RIB5P38145 238 aa3.18□□□□□ -1.9
HDA2YDR295C PRS2P38620 318 aaKnown RBP3.18□□□□□ -1.9
HDA2YDR295C RCK2P38623 610 aa3.18□□□□□ -1.9
HDA2YDR295C TRM5P38793 499 aa3.18□□□□□ -1.9
HDA2YDR295C NPT1P39683 429 aaKnown RBP3.18□□□□□ -1.9
HDA2YDR295C FRT2P39734 528 aa3.18□□□□□ -1.9
HDA2YDR295C YER184CP39961 794 aa3.18□□□□□ -1.9
HDA2YDR295C XBP1P40489 647 aa3.18□□□□□ -1.9
HDA2YDR295C RTT101P47050 842 aa3.18□□□□□ -1.9
HDA2YDR295C YJR056CP47115 236 aa3.18□□□□□ -1.9
HDA2YDR295C YJR141WP47172 347 aaPredicted RBP3.18□□□□□ -1.9
HDA2YDR295C TIS11P47977 285 aa3.18□□□□□ -1.9
HDA2YDR295C ERG13P54839 491 aaKnown RBP3.18□□□□□ -1.9
HDA2YDR295C MSS11Q03825 758 aa3.18□□□□□ -1.9
HDA2YDR295C ASA1Q06822 443 aa3.18□□□□□ -1.9
HDA2YDR295C PBP4Q07362 185 aaKnown RBP3.18□□□□□ -1.9
HDA2YDR295C PLB3Q08108 686 aa3.18□□□□□ -1.9
HDA2YDR295C MUM3Q08750 479 aa3.18□□□□□ -1.9
HDA2YDR295C YPQ1Q12010 308 aa3.18□□□□□ -1.9
HDA2YDR295C TMS1Q12116 473 aa3.18□□□□□ -1.9
HDA2YDR295C ATG34Q12292 412 aa3.18□□□□□ -1.9
HDA2YDR295C ERP3Q12403 225 aa3.18□□□□□ -1.9
HDA2YDR295C NOT5Q12514 560 aaPredicted RBP3.18□□□□□ -1.9
HDA2YDR295C YOR338WQ99326 363 aa3.18□□□□□ -1.9
HDA2YDR295C TAD3Q9URQ3 322 aa3.18□□□□□ -1.9
HDA2YDR295C ARF1P11076 181 aaKnown RBP3.17□□□□□ -1.9
HDA2YDR295C MRPL6P32904 214 aa3.17□□□□□ -1.9
HDA2YDR295C SWD2P36104 329 aaPredicted RBP3.17□□□□□ -1.9
HDA2YDR295C PHO90P39535 881 aa3.17□□□□□ -1.9
HDA2YDR295C DDI1P40087 428 aa3.17□□□□□ -1.9
HDA2YDR295C POP1P41812 875 aa3.17□□□□□ -1.9
HDA2YDR295C IDP2P41939 412 aa3.17□□□□□ -1.9
HDA2YDR295C YFL040WP43562 540 aa3.17□□□□□ -1.9
HDA2YDR295C YPT32P51996 222 aaKnown RBP3.17□□□□□ -1.9
HDA2YDR295C MGA1P53050 456 aa3.17□□□□□ -1.9
HDA2YDR295C YGR042WP53227 271 aa3.17□□□□□ -1.9
HDA2YDR295C BUD32P53323 261 aa3.17□□□□□ -1.9
HDA2YDR295C YIF1P53845 314 aaKnown RBP3.17□□□□□ -1.9
HDA2YDR295C NUP100Q02629 959 aa3.17□□□□□ -1.9
HDA2YDR295C YMR034CQ05131 434 aaPredicted RBP3.17□□□□□ -1.9
HDA2YDR295C DDC1Q08949 612 aa3.17□□□□□ -1.9
HDA2YDR295C APC9Q12107 265 aa3.17□□□□□ -1.9
HDA2YDR295C WTM1Q12363 437 aaKnown RBP3.17□□□□□ -1.9
HDA2YDR295C SUC2P00724 532 aa3.17□□□□□ -1.9
HDA2YDR295C HIS4P00815 799 aaKnown RBP3.17□□□□□ -1.9
HDA2YDR295C RPL42AP0CX27 106 aaKnown RBP3.17□□□□□ -1.9
HDA2YDR295C RPL42BP0CX28 106 aaKnown RBP3.17□□□□□ -1.9
HDA2YDR295C URA6P15700 204 aa3.17□□□□□ -1.9
HDA2YDR295C ACB1P31787 87 aa3.17□□□□□ -1.9
HDA2YDR295C VMA22P38784 181 aa3.17□□□□□ -1.9
HDA2YDR295C COX15P40086 486 aa3.17□□□□□ -1.9
HDA2YDR295C JHD2P47156 728 aaPredicted RBP3.17□□□□□ -1.9
HDA2YDR295C VEL1P53058 206 aa3.17□□□□□ -1.9
HDA2YDR295C YLR460CP54007 376 aa3.17□□□□□ -1.9
HDA2YDR295C CDC14Q00684 551 aa3.17□□□□□ -1.9
HDA2YDR295C YDR387CQ04162 555 aa3.17□□□□□ -1.9
HDA2YDR295C VBA1Q04301 562 aa3.17□□□□□ -1.9
HDA2YDR295C SEC13Q04491 297 aaKnown RBP3.17□□□□□ -1.9
HDA2YDR295C MES1P00958 751 aaKnown RBP3.16□□□□□ -1.9
HDA2YDR295C ASP3-2P0CX77 362 aa3.16□□□□□ -1.9
HDA2YDR295C ASP3-3P0CX78 362 aa3.16□□□□□ -1.9
HDA2YDR295C ASP3-4P0CX79 362 aa3.16□□□□□ -1.9
HDA2YDR295C ASP3-1P0CZ17 362 aa3.16□□□□□ -1.9
HDA2YDR295C NAM9P27929 486 aa3.16□□□□□ -1.9
HDA2YDR295C EHD3P28817 500 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 36.2 ms