RNA–Protein interactions for RNA: YMR272C

SCS7, Transcript of Sphingolipid alpha-hydroxylase, yeastyeast

Gene SCS7, Length 1,155 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCS7YMR272C YLL066CQ99208 1374 aa8.25□□□□□ -1.09
SCS7YMR272C ADE16P54113 591 aaKnown RBP8.25□□□□□ -1.09
SCS7YMR272C OSM1P21375 501 aaKnown RBP8.24□□□□□ -1.09
SCS7YMR272C CTH1P47976 325 aa8.24□□□□□ -1.09
SCS7YMR272C YIL177CP40434 1758 aa8.23□□□□□ -1.09
SCS7YMR272C YJL225CP40889 1758 aa8.23□□□□□ -1.09
SCS7YMR272C HSP104P31539 908 aaKnown RBP8.23□□□□□ -1.09
SCS7YMR272C GRE2Q12068 342 aaKnown RBP8.23□□□□□ -1.09
SCS7YMR272C RIM15P43565 1770 aa8.22□□□□□ -1.09
SCS7YMR272C AOS1Q06624 347 aa8.22□□□□□ -1.09
SCS7YMR272C HIM1Q06674 414 aa8.21□□□□□ -1.1
SCS7YMR272C CTT1P06115 562 aa8.2□□□□□ -1.1
SCS7YMR272C DSD1P53095 428 aa8.2□□□□□ -1.1
SCS7YMR272C INP54Q08227 384 aaKnown RBP8.2□□□□□ -1.1
SCS7YMR272C RPS9BP05755 195 aaKnown RBP8.19□□□□□ -1.1
SCS7YMR272C YKL222CP35995 705 aa8.19□□□□□ -1.1
SCS7YMR272C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.19□□□□□ -1.1not detected
SCS7YMR272C MSN5P52918 1224 aa8.19□□□□□ -1.1
SCS7YMR272C RMT2Q03305 412 aa8.19□□□□□ -1.1
SCS7YMR272C KCC4P25389 1037 aa8.17□□□□□ -1.1
SCS7YMR272C AKL1P38080 1108 aaKnown RBP8.17□□□□□ -1.1
SCS7YMR272C TOS1P38288 455 aa8.16□□□□□ -1.1
SCS7YMR272C AUS1Q08409 1394 aa8.16□□□□□ -1.1
SCS7YMR272C YER156CP40093 338 aaKnown RBP8.15□□□□□ -1.1
SCS7YMR272C NSE3Q05541 303 aa8.15□□□□□ -1.1
SCS7YMR272C DIB1Q06819 143 aaPredicted RBP8.15□□□□□ -1.1
SCS7YMR272C UGA3P26370 528 aa8.14□□□□□ -1.11
SCS7YMR272C NST1P53935 1240 aa8.14□□□□□ -1.11
SCS7YMR272C NUP145P49687 1317 aa8.13□□□□□ -1.11
SCS7YMR272C YFR016CP43597 1233 aaKnown RBP8.13□□□□□ -1.11
SCS7YMR272C SSP2Q08646 371 aa8.13□□□□□ -1.11
SCS7YMR272C LPD1P09624 499 aaKnown RBP8.12□□□□□ -1.11
SCS7YMR272C RAT1Q02792 1006 aaKnown RBP8.12□□□□□ -1.11
SCS7YMR272C NOP53Q12080 455 aaKnown RBP8.12□□□□□ -1.11
SCS7YMR272C SER1P33330 395 aaKnown RBP8.11□□□□□ -1.11
SCS7YMR272C BUD27P43573 796 aaKnown RBP RIP-Chip data8.11□□□□□ -1.11not detected
SCS7YMR272C EAF6P47128 113 aa8.11□□□□□ -1.11
SCS7YMR272C TEA1P47988 759 aa8.11□□□□□ -1.11
SCS7YMR272C PHM7Q12252 991 aa8.11□□□□□ -1.11
SCS7YMR272C PFF1P38244 976 aa8.1□□□□□ -1.11
SCS7YMR272C IRC3Q06683 689 aa8.1□□□□□ -1.11
SCS7YMR272C NYV1Q12255 253 aa8.09□□□□□ -1.11
SCS7YMR272C ERT1P38140 529 aa8.08□□□□□ -1.12
SCS7YMR272C MAM1P40065 302 aa8.08□□□□□ -1.12
SCS7YMR272C CWH41P53008 833 aa8.08□□□□□ -1.12
SCS7YMR272C IOC4Q04213 475 aa8.08□□□□□ -1.12
SCS7YMR272C NTH2P35172 780 aa8.07□□□□□ -1.12
SCS7YMR272C ZDS1P50111 915 aaKnown RBP8.07□□□□□ -1.12
SCS7YMR272C FPK1P53739 893 aa8.07□□□□□ -1.12
SCS7YMR272C YNL050CP53952 270 aa8.07□□□□□ -1.12
SCS7YMR272C TUM1Q08686 304 aaKnown RBP8.07□□□□□ -1.12
SCS7YMR272C CTI6Q08923 506 aa8.07□□□□□ -1.12
SCS7YMR272C RTR1P40084 226 aaPredicted RBP8.06□□□□□ -1.12
SCS7YMR272C PEX21P50091 288 aa8.06□□□□□ -1.12
SCS7YMR272C SQS1P53866 767 aaKnown RBP8.06□□□□□ -1.12
SCS7YMR272C ALE1Q08548 619 aa8.05□□□□□ -1.12
SCS7YMR272C BDF2Q07442 638 aa8.04□□□□□ -1.12
SCS7YMR272C RIX7Q07844 837 aaKnown RBP8.04□□□□□ -1.12
SCS7YMR272C TRK1P12685 1235 aa8.03□□□□□ -1.12
SCS7YMR272C YGL082WP53155 381 aa8.02□□□□□ -1.13
SCS7YMR272C GRX6Q12438 231 aa8.02□□□□□ -1.13
SCS7YMR272C LYS2P07702 1392 aa8.01□□□□□ -1.13
SCS7YMR272C SIT4P20604 311 aa8.01□□□□□ -1.13
SCS7YMR272C ERO1Q03103 563 aa8.01□□□□□ -1.13
SCS7YMR272C HAT1Q12341 374 aa8.01□□□□□ -1.13
SCS7YMR272C YKU70P32807 602 aa8□□□□□ -1.13
SCS7YMR272C TIF4632P39936 914 aaKnown RBP8□□□□□ -1.13
SCS7YMR272C SUP35P05453 685 aaKnown RBP7.99□□□□□ -1.13
SCS7YMR272C SLI15P38283 698 aa7.99□□□□□ -1.13
SCS7YMR272C SHC1P39000 512 aa7.99□□□□□ -1.13
SCS7YMR272C SAS4Q04003 481 aa7.99□□□□□ -1.13
SCS7YMR272C TOP1P04786 769 aa7.98□□□□□ -1.13
SCS7YMR272C PRD1P25375 712 aa7.98□□□□□ -1.13
SCS7YMR272C GYP7P48365 746 aa7.98□□□□□ -1.13
SCS7YMR272C PKH1Q03407 766 aa7.98□□□□□ -1.13
SCS7YMR272C MSM1P22438 575 aa7.97□□□□□ -1.13
SCS7YMR272C SMY1P32364 656 aaKnown RBP7.97□□□□□ -1.13
SCS7YMR272C RRD1P40454 393 aaKnown RBP7.97□□□□□ -1.13
SCS7YMR272C PSD2P53037 1138 aaKnown RBP7.97□□□□□ -1.13
SCS7YMR272C DNM1P54861 757 aa7.97□□□□□ -1.13
SCS7YMR272C KIN4Q01919 800 aa7.97□□□□□ -1.13
SCS7YMR272C SSK22P25390 1331 aaPredicted RBP7.97□□□□□ -1.13
SCS7YMR272C VPS64Q03944 604 aa7.96□□□□□ -1.14
SCS7YMR272C SYF1Q04048 859 aaPredicted RBP7.96□□□□□ -1.14
SCS7YMR272C BMS1Q08965 1183 aaKnown RBP7.96□□□□□ -1.14
SCS7YMR272C UTP10P42945 1769 aaKnown RBP7.95□□□□□ -1.14
SCS7YMR272C RET1P22276 1149 aaKnown RBP7.95□□□□□ -1.14
SCS7YMR272C RPN1P38764 993 aaKnown RBP7.95□□□□□ -1.14
SCS7YMR272C UBX2Q04228 584 aa7.95□□□□□ -1.14
SCS7YMR272C ICL1P28240 557 aaPredicted RBP7.94□□□□□ -1.14
SCS7YMR272C ATG20Q07528 640 aa7.94□□□□□ -1.14
SCS7YMR272C NSR1P27476 414 aaKnown RBP RIP-Chip data7.93□□□□□ -1.14not detected
SCS7YMR272C RTG2P32608 588 aaKnown RBP7.93□□□□□ -1.14
SCS7YMR272C PUS5Q06244 254 aa7.93□□□□□ -1.14
SCS7YMR272C YOL057WQ08225 711 aa7.93□□□□□ -1.14
SCS7YMR272C NOP8Q08287 484 aaPredicted RBP7.93□□□□□ -1.14
SCS7YMR272C SSA4P22202 642 aaKnown RBP7.92□□□□□ -1.14
SCS7YMR272C FRD1P32614 470 aaKnown RBP7.92□□□□□ -1.14
SCS7YMR272C CRF1Q04930 467 aa7.92□□□□□ -1.14
SCS7YMR272C YLR271WQ06152 274 aa7.92□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 108.7 ms