RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C PDR5P33302 1511 aaKnown RBP8.39□□□□□ -1.07
AFG2YLR397C SSL2Q00578 843 aa8.39□□□□□ -1.07
AFG2YLR397C YOR389WQ08912 624 aa8.39□□□□□ -1.07
AFG2YLR397C PET111P08468 800 aa8.38□□□□□ -1.07
AFG2YLR397C KAR3P17119 729 aa8.38□□□□□ -1.07
AFG2YLR397C MSH1P25846 959 aa8.38□□□□□ -1.07
AFG2YLR397C GGA1Q06336 557 aa8.38□□□□□ -1.07
AFG2YLR397C SPR3P41901 512 aa8.38□□□□□ -1.07
AFG2YLR397C INP52P50942 1183 aa8.38□□□□□ -1.07
AFG2YLR397C KEX2P13134 814 aa8.37□□□□□ -1.07
AFG2YLR397C BEM4P39011 633 aa8.37□□□□□ -1.07
AFG2YLR397C NOP7P53261 605 aaKnown RBP8.37□□□□□ -1.07
AFG2YLR397C TAF13P11747 167 aa8.37□□□□□ -1.07
AFG2YLR397C SEC26P41810 973 aaKnown RBP8.37□□□□□ -1.07
AFG2YLR397C YJR142WP47173 342 aa8.37□□□□□ -1.07
AFG2YLR397C HAP5Q02516 242 aa8.37□□□□□ -1.07
AFG2YLR397C SRS2P12954 1174 aa8.36□□□□□ -1.07
AFG2YLR397C SEC14P24280 304 aaKnown RBP8.36□□□□□ -1.07
AFG2YLR397C TOM71P38825 639 aaKnown RBP8.36□□□□□ -1.07
AFG2YLR397C RVS167P39743 482 aaKnown RBP8.36□□□□□ -1.07
AFG2YLR397C MPH1P40562 993 aa8.36□□□□□ -1.07
AFG2YLR397C STU2P46675 888 aa8.36□□□□□ -1.07
AFG2YLR397C YNL050CP53952 270 aa8.36□□□□□ -1.07
AFG2YLR397C UBX2Q04228 584 aa8.36□□□□□ -1.07
AFG2YLR397C VMS1Q04311 632 aaKnown RBP8.36□□□□□ -1.07
AFG2YLR397C KOG1P38873 1557 aa8.36□□□□□ -1.07
AFG2YLR397C CEP3P40969 608 aa8.36□□□□□ -1.07
AFG2YLR397C IAH1P41734 238 aa8.36□□□□□ -1.07
AFG2YLR397C WHI5Q12416 295 aa8.36□□□□□ -1.07
AFG2YLR397C ROM2P51862 1356 aaKnown RBP8.35□□□□□ -1.07
AFG2YLR397C YME2P32843 850 aa8.35□□□□□ -1.07
AFG2YLR397C NPL4P33755 580 aa8.35□□□□□ -1.07
AFG2YLR397C SLD2P34252 453 aa8.35□□□□□ -1.07
AFG2YLR397C RFC5P38251 354 aa8.35□□□□□ -1.07
AFG2YLR397C SAP1P39955 897 aaKnown RBP8.35□□□□□ -1.07
AFG2YLR397C NDC80P40460 691 aa8.35□□□□□ -1.07
AFG2YLR397C CIR1P42940 261 aa8.35□□□□□ -1.07
AFG2YLR397C TY4B-PA0A0B7P3V8 1104 aa8.35□□□□□ -1.07
AFG2YLR397C PDI1P17967 522 aaKnown RBP8.35□□□□□ -1.07
AFG2YLR397C ELM1P32801 640 aa8.35□□□□□ -1.07
AFG2YLR397C YMR124WP39523 943 aaKnown RBP8.35□□□□□ -1.07
AFG2YLR397C SPO19Q03029 223 aa8.35□□□□□ -1.07
AFG2YLR397C ARR1Q06596 294 aa8.35□□□□□ -1.07
AFG2YLR397C CFT2Q12102 859 aaPredicted RBP8.35□□□□□ -1.07
AFG2YLR397C CDC11P32458 415 aa8.34□□□□□ -1.07
AFG2YLR397C UBP14P38237 781 aaKnown RBP8.34□□□□□ -1.07
AFG2YLR397C RFC1P38630 861 aaKnown RBP8.34□□□□□ -1.07
AFG2YLR397C ALD2P47771 506 aa8.34□□□□□ -1.07
AFG2YLR397C CTI6Q08923 506 aa8.34□□□□□ -1.07
AFG2YLR397C MSB4Q12317 492 aa8.34□□□□□ -1.07
AFG2YLR397C HSL1P34244 1518 aa8.34□□□□□ -1.07
AFG2YLR397C CLN1P20437 546 aa8.34□□□□□ -1.08
AFG2YLR397C MTR4P47047 1073 aaKnown RBP8.34□□□□□ -1.08
AFG2YLR397C IQG1Q12280 1495 aa8.33□□□□□ -1.08
AFG2YLR397C RPN12P32496 274 aa8.33□□□□□ -1.08
AFG2YLR397C YKR023WP36119 530 aaKnown RBP8.33□□□□□ -1.08
AFG2YLR397C RRP9Q06506 573 aaKnown RBP8.33□□□□□ -1.08
AFG2YLR397C DID4P36108 232 aa8.32□□□□□ -1.08
AFG2YLR397C NPA3P47122 385 aa8.32□□□□□ -1.08
AFG2YLR397C CEF1Q03654 590 aaPredicted RBP8.32□□□□□ -1.08
AFG2YLR397C YMR196WQ04336 1088 aa8.32□□□□□ -1.08
AFG2YLR397C IMH1Q06704 911 aaKnown RBP8.32□□□□□ -1.08
AFG2YLR397C POL1P13382 1468 aa8.32□□□□□ -1.08
AFG2YLR397C RAD16P31244 790 aa8.32□□□□□ -1.08
AFG2YLR397C UTP4Q06679 776 aaKnown RBP8.32□□□□□ -1.08
AFG2YLR397C RIX7Q07844 837 aaKnown RBP8.32□□□□□ -1.08
AFG2YLR397C RPG1P38249 964 aaKnown RBP8.31□□□□□ -1.08
AFG2YLR397C BRF1P29056 596 aa8.31□□□□□ -1.08
AFG2YLR397C YRB1P41920 201 aaKnown RBP8.31□□□□□ -1.08
AFG2YLR397C RCF1Q03713 159 aa8.31□□□□□ -1.08
AFG2YLR397C UBP1P25037 809 aa8.3□□□□□ -1.08
AFG2YLR397C TPO2P53283 614 aa8.3□□□□□ -1.08
AFG2YLR397C APC11Q12157 165 aa8.3□□□□□ -1.08
AFG2YLR397C PBY1P38254 753 aa8.3□□□□□ -1.08
AFG2YLR397C HOS4P40480 1083 aa8.29□□□□□ -1.08
AFG2YLR397C GLE1Q12315 538 aa8.29□□□□□ -1.08
AFG2YLR397C RAD50P12753 1312 aa8.29□□□□□ -1.08
AFG2YLR397C SEC66P33754 206 aa8.29□□□□□ -1.08
AFG2YLR397C RRT14P40470 206 aa8.29□□□□□ -1.08
AFG2YLR397C POL32P47110 350 aa8.29□□□□□ -1.08
AFG2YLR397C JJJ1P53863 590 aa8.29□□□□□ -1.08
AFG2YLR397C RRB1Q04225 511 aaKnown RBP8.29□□□□□ -1.08
AFG2YLR397C RME1P32338 300 aaKnown RBP8.28□□□□□ -1.08
AFG2YLR397C ATG36P46983 293 aa8.28□□□□□ -1.08
AFG2YLR397C GEA2P39993 1459 aaKnown RBP8.28□□□□□ -1.08
AFG2YLR397C RPP0P05317 312 aaKnown RBP8.28□□□□□ -1.08
AFG2YLR397C SES1P07284 462 aaKnown RBP8.28□□□□□ -1.08
AFG2YLR397C HEL1P36113 551 aa8.28□□□□□ -1.08
AFG2YLR397C RGD1P38339 666 aa8.28□□□□□ -1.08
AFG2YLR397C SRC1Q03707 834 aa8.28□□□□□ -1.08
AFG2YLR397C RTC1Q08281 1341 aa8.27□□□□□ -1.08
AFG2YLR397C CDC60P26637 1090 aaKnown RBP8.27□□□□□ -1.09
AFG2YLR397C RTF1P53064 558 aa8.27□□□□□ -1.09
AFG2YLR397C KRE28Q04431 385 aa8.27□□□□□ -1.09
AFG2YLR397C SNQ2P32568 1501 aaKnown RBP8.27□□□□□ -1.09
AFG2YLR397C PTH2P34222 208 aa8.26□□□□□ -1.09
AFG2YLR397C SWR1Q05471 1514 aa8.26□□□□□ -1.09
AFG2YLR397C SSK2P53599 1579 aa8.26□□□□□ -1.09
AFG2YLR397C HSP104P31539 908 aaKnown RBP8.26□□□□□ -1.09
AFG2YLR397C RIO2P40160 425 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms