RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W GRE2Q12068 342 aaKnown RBP3.4□□□□□ -1.86
SDC25YLL016W BUD31P25337 157 aaPredicted RBP3.4□□□□□ -1.87
SDC25YLL016W CLB5P30283 435 aa3.4□□□□□ -1.87
SDC25YLL016W TSC11P40061 1430 aa3.4□□□□□ -1.87
SDC25YLL016W RTS3P53289 263 aa3.4□□□□□ -1.87
SDC25YLL016W ECM23Q02710 187 aa3.4□□□□□ -1.87
SDC25YLL016W JIP5Q06214 492 aaPredicted RBP3.4□□□□□ -1.87
SDC25YLL016W SCJ1P25303 377 aa3.39□□□□□ -1.87
SDC25YLL016W PCS60P38137 543 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
SDC25YLL016W FPK1P53739 893 aa3.39□□□□□ -1.87
SDC25YLL016W SAM3Q08986 587 aa3.39□□□□□ -1.87
SDC25YLL016W DNF3Q12674 1656 aa3.39□□□□□ -1.87
SDC25YLL016W PDR15Q04182 1529 aaKnown RBP3.39□□□□□ -1.87
SDC25YLL016W SUP45P12385 437 aaKnown RBP3.39□□□□□ -1.87
SDC25YLL016W NIS1P53939 407 aa3.39□□□□□ -1.87
SDC25YLL016W SVF1Q05515 481 aa3.39□□□□□ -1.87
SDC25YLL016W MYO4P32492 1471 aa3.39□□□□□ -1.87
SDC25YLL016W YOR1P53049 1477 aa3.39□□□□□ -1.87
SDC25YLL016W KEX1P09620 729 aa3.39□□□□□ -1.87
SDC25YLL016W ERP5P38819 212 aa3.39□□□□□ -1.87
SDC25YLL016W CST6P40535 587 aa3.39□□□□□ -1.87
SDC25YLL016W YJR008WP47085 338 aa3.39□□□□□ -1.87
SDC25YLL016W KAR5Q04746 504 aa3.39□□□□□ -1.87
SDC25YLL016W URN1Q06525 465 aaKnown RBP3.39□□□□□ -1.87
SDC25YLL016W POL1P13382 1468 aa3.39□□□□□ -1.87
SDC25YLL016W BUD3P25558 1636 aa3.38□□□□□ -1.87
SDC25YLL016W YJU3P28321 313 aa3.38□□□□□ -1.87
SDC25YLL016W GUT1P32190 709 aa3.38□□□□□ -1.87
SDC25YLL016W HST2P53686 357 aa3.38□□□□□ -1.87
SDC25YLL016W PPG1P32838 368 aa3.38□□□□□ -1.87
SDC25YLL016W GRS1P38088 690 aaKnown RBP3.38□□□□□ -1.87
SDC25YLL016W UBX7P38349 436 aa3.38□□□□□ -1.87
SDC25YLL016W ORC6P38826 435 aa3.38□□□□□ -1.87
SDC25YLL016W NUG1P40010 520 aaKnown RBP3.38□□□□□ -1.87
SDC25YLL016W FAR11P53917 953 aa3.38□□□□□ -1.87
SDC25YLL016W YAF9P53930 226 aa3.38□□□□□ -1.87
SDC25YLL016W DOS2P54858 310 aa3.38□□□□□ -1.87
SDC25YLL016W YHL050CP38721 697 aa3.37□□□□□ -1.87
SDC25YLL016W YHR219WP38900 624 aa3.37□□□□□ -1.87
SDC25YLL016W YGR273CP53329 174 aa3.37□□□□□ -1.87
SDC25YLL016W OYE2Q03558 400 aaKnown RBP3.37□□□□□ -1.87
SDC25YLL016W MSC6Q08818 692 aaKnown RBP3.37□□□□□ -1.87
SDC25YLL016W YEL077CQ3E7X8 1277 aa3.37□□□□□ -1.87
SDC25YLL016W VMA1P17255 1071 aaKnown RBP3.37□□□□□ -1.87
SDC25YLL016W RGR1P19263 1082 aa3.37□□□□□ -1.87
SDC25YLL016W SPT5P27692 1063 aaKnown RBP3.37□□□□□ -1.87
SDC25YLL016W NMD2P38798 1089 aaKnown RBP3.37□□□□□ -1.87
SDC25YLL016W PDR12Q02785 1511 aa3.37□□□□□ -1.87
SDC25YLL016W RIM21P48565 533 aa3.37□□□□□ -1.87
SDC25YLL016W GDB1Q06625 1536 aa3.36□□□□□ -1.87
SDC25YLL016W PDR10P51533 1564 aa3.36□□□□□ -1.87
SDC25YLL016W TIF4632P39936 914 aaKnown RBP3.36□□□□□ -1.87
SDC25YLL016W MRX10Q05648 414 aa3.36□□□□□ -1.87
SDC25YLL016W IOC2Q12072 812 aa3.36□□□□□ -1.87
SDC25YLL016W CHC1P22137 1653 aaKnown RBP3.36□□□□□ -1.87
SDC25YLL016W IQG1Q12280 1495 aa3.35□□□□□ -1.87
SDC25YLL016W ATE1P16639 503 aa3.35□□□□□ -1.87
SDC25YLL016W YAP5P40574 245 aa3.35□□□□□ -1.87
SDC25YLL016W DAN4P47179 1161 aa3.35□□□□□ -1.87
SDC25YLL016W RNH70P53331 553 aa3.35□□□□□ -1.87
SDC25YLL016W SUB1P54000 292 aaKnown RBP3.35□□□□□ -1.87
SDC25YLL016W SNQ2P32568 1501 aaKnown RBP3.35□□□□□ -1.87
SDC25YLL016W MGE1P38523 228 aa3.35□□□□□ -1.87
SDC25YLL016W MVP1P40959 511 aaKnown RBP3.35□□□□□ -1.87
SDC25YLL016W YPP1P46951 817 aa3.35□□□□□ -1.87
SDC25YLL016W LAM6Q08001 693 aa3.35□□□□□ -1.87
SDC25YLL016W ENV9Q08651 330 aa3.35□□□□□ -1.87
SDC25YLL016W RRP14P36080 434 aaKnown RBP3.35□□□□□ -1.87
SDC25YLL016W VNX1P42839 908 aa3.35□□□□□ -1.87
SDC25YLL016W STU1P38198 1513 aa3.34□□□□□ -1.87
SDC25YLL016W SRP40P32583 406 aaPredicted RBP3.34□□□□□ -1.87
SDC25YLL016W SEC8P32855 1065 aa3.34□□□□□ -1.87
SDC25YLL016W YPR109WQ06104 294 aa3.34□□□□□ -1.87
SDC25YLL016W YOL098CQ12496 1037 aa3.34□□□□□ -1.87
SDC25YLL016W MLP2P40457 1679 aa3.34□□□□□ -1.87
SDC25YLL016W RPP1BP10622 106 aaKnown RBP3.33□□□□□ -1.88
SDC25YLL016W MAK16P10962 306 aaPredicted RBP3.33□□□□□ -1.88
SDC25YLL016W SLY41P22215 453 aa3.33□□□□□ -1.88
SDC25YLL016W ILV3P39522 585 aaKnown RBP3.33□□□□□ -1.88
SDC25YLL016W YRB30P53107 440 aaPredicted RBP3.33□□□□□ -1.88
SDC25YLL016W GAL2P13181 574 aa3.33□□□□□ -1.88
SDC25YLL016W MET1P36150 593 aa3.33□□□□□ -1.88
SDC25YLL016W YDR344CQ05510 147 aa3.33□□□□□ -1.88
SDC25YLL016W RRP15Q06511 250 aaPredicted RBP3.33□□□□□ -1.88
SDC25YLL016W YBL029C-AQ3E756 94 aa3.33□□□□□ -1.88
SDC25YLL016W ARO1P08566 1588 aaKnown RBP3.32□□□□□ -1.88
SDC25YLL016W TSR4P25040 408 aa3.32□□□□□ -1.88
SDC25YLL016W YKL091CP33324 310 aaKnown RBP3.32□□□□□ -1.88
SDC25YLL016W VAC8P39968 578 aa3.32□□□□□ -1.88
SDC25YLL016W PEX21P50091 288 aa3.32□□□□□ -1.88
SDC25YLL016W VPS72Q03388 795 aa3.32□□□□□ -1.88
SDC25YLL016W WHI5Q12416 295 aa3.32□□□□□ -1.88
SDC25YLL016W GYP5Q12344 894 aa3.32□□□□□ -1.88
SDC25YLL016W PEP12P32854 288 aa3.31□□□□□ -1.88
SDC25YLL016W PPX1P38698 397 aa3.31□□□□□ -1.88
SDC25YLL016W MAD1P40957 749 aa3.31□□□□□ -1.88
SDC25YLL016W MDJ2P42834 146 aa3.31□□□□□ -1.88
SDC25YLL016W MCM16Q12262 181 aa3.31□□□□□ -1.88
SDC25YLL016W FUR4P05316 633 aaKnown RBP3.31□□□□□ -1.88
SDC25YLL016W ISF1P32488 338 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms