RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W DRS1P32892 752 aaKnown RBP5.83□□□□□ -1.48
SDC25YLL016W MTC1P47018 478 aaKnown RBP5.44□□□□□ -1.54
SDC25YLL016W BFR2Q06631 534 aaKnown RBP5.28□□□□□ -1.56
SDC25YLL016W TFA1P36100 482 aa5.23□□□□□ -1.57
SDC25YLL016W RQC2Q12532 1038 aaKnown RBP5.08□□□□□ -1.6
SDC25YLL016W AVT3P36062 692 aa4.77□□□□□ -1.65
SDC25YLL016W DIP2Q12220 943 aaPredicted RBP4.75□□□□□ -1.65
SDC25YLL016W TAF7Q05021 590 aa4.73□□□□□ -1.65
SDC25YLL016W MON2P48563 1636 aaPredicted RBP4.7□□□□□ -1.66
SDC25YLL016W INO80P53115 1489 aa4.63□□□□□ -1.67
SDC25YLL016W DMA1P38823 416 aa4.57□□□□□ -1.68
SDC25YLL016W PRI1P10363 409 aa4.51□□□□□ -1.69
SDC25YLL016W YCK3P39962 524 aa4.46□□□□□ -1.69
SDC25YLL016W DNA2P38859 1522 aa4.41□□□□□ -1.7
SDC25YLL016W KOG1P38873 1557 aa4.4□□□□□ -1.71
SDC25YLL016W LEO1P38439 464 aa4.38□□□□□ -1.71
SDC25YLL016W RSE1Q04693 1361 aaKnown RBP4.36□□□□□ -1.71
SDC25YLL016W PTP3P40048 928 aa4.35□□□□□ -1.71
SDC25YLL016W SWR1Q05471 1514 aa4.35□□□□□ -1.71
SDC25YLL016W RPG1P38249 964 aaKnown RBP4.32□□□□□ -1.72
SDC25YLL016W FAP1P53971 965 aa4.31□□□□□ -1.72
SDC25YLL016W AAD16Q02895 342 aa4.28□□□□□ -1.72
SDC25YLL016W ISW2Q08773 1120 aa4.25□□□□□ -1.73
SDC25YLL016W TY1B-DR4Q07793 1604 aa4.24□□□□□ -1.73
SDC25YLL016W TCB3Q03640 1545 aaKnown RBP4.24□□□□□ -1.73
SDC25YLL016W SPT21P35209 758 aa4.23□□□□□ -1.73
SDC25YLL016W SPA2P23201 1466 aaKnown RBP4.18□□□□□ -1.74
SDC25YLL016W RPL17AP05740 184 aaKnown RBP4.17□□□□□ -1.74
SDC25YLL016W RPL17BP46990 184 aaKnown RBP4.17□□□□□ -1.74
SDC25YLL016W TSR3Q12094 313 aaKnown RBP4.15□□□□□ -1.74
SDC25YLL016W LEU3P08638 886 aa4.15□□□□□ -1.75
SDC25YLL016W SSP1P38871 571 aa4.14□□□□□ -1.75
SDC25YLL016W PRY3P47033 881 aa4.11□□□□□ -1.75
SDC25YLL016W REB1P21538 810 aa4.1□□□□□ -1.75
SDC25YLL016W YKR023WP36119 530 aaKnown RBP4.1□□□□□ -1.75
SDC25YLL016W DMA2P53924 522 aa4.08□□□□□ -1.76
SDC25YLL016W RIM101P33400 625 aa4.07□□□□□ -1.76
SDC25YLL016W SAS10Q12136 610 aaPredicted RBP4.06□□□□□ -1.76
SDC25YLL016W YAH1Q12184 172 aaKnown RBP4.06□□□□□ -1.76
SDC25YLL016W ARP8Q12386 881 aaKnown RBP RIP-Chip data4.05□□□□□ -1.76not detected
SDC25YLL016W THO2P53552 1597 aaKnown RBP4.04□□□□□ -1.76
SDC25YLL016W RPN1P38764 993 aaKnown RBP4.02□□□□□ -1.77
SDC25YLL016W HSL1P34244 1518 aa4.01□□□□□ -1.77
SDC25YLL016W SPT6P23615 1451 aaKnown RBP4.01□□□□□ -1.77
SDC25YLL016W CDC27P38042 758 aa4□□□□□ -1.77
SDC25YLL016W OXP1P28273 1286 aa3.98□□□□□ -1.77
SDC25YLL016W RLF2Q12495 606 aa3.98□□□□□ -1.77
SDC25YLL016W BUD4P47136 1447 aa3.98□□□□□ -1.77
SDC25YLL016W ECM5Q03214 1411 aa3.98□□□□□ -1.77
SDC25YLL016W YIL055CP40523 627 aaKnown RBP3.97□□□□□ -1.77
SDC25YLL016W REV3P14284 1504 aa3.96□□□□□ -1.77
SDC25YLL016W MDS3P53094 1487 aa3.96□□□□□ -1.78
SDC25YLL016W SPB4P25808 606 aaPredicted RBP3.95□□□□□ -1.78
SDC25YLL016W MIF2P35201 549 aa3.94□□□□□ -1.78
SDC25YLL016W YLR271WQ06152 274 aa3.94□□□□□ -1.78
SDC25YLL016W TFC8Q12308 588 aa3.93□□□□□ -1.78
SDC25YLL016W MGA2P40578 1113 aa3.92□□□□□ -1.78
SDC25YLL016W SGS1P35187 1447 aa3.92□□□□□ -1.78
SDC25YLL016W ABP1P15891 592 aaKnown RBP3.92□□□□□ -1.78
SDC25YLL016W HIR3P47171 1648 aa3.91□□□□□ -1.78
SDC25YLL016W CKB1P43639 278 aa3.9□□□□□ -1.79
SDC25YLL016W HAA1Q12753 694 aaKnown RBP3.9□□□□□ -1.79
SDC25YLL016W DCD1P06773 312 aa3.9□□□□□ -1.79
SDC25YLL016W PEP1P32319 1579 aa3.89□□□□□ -1.79
SDC25YLL016W BPT1P14772 1559 aa3.89□□□□□ -1.79
SDC25YLL016W AIM44Q99299 758 aa3.89□□□□□ -1.79
SDC25YLL016W VPS70P47161 811 aa3.86□□□□□ -1.79
SDC25YLL016W CST9Q06032 482 aa3.86□□□□□ -1.79
SDC25YLL016W HGH1P48362 394 aaKnown RBP3.86□□□□□ -1.79
SDC25YLL016W HOP09932 586 aa3.85□□□□□ -1.79
SDC25YLL016W RSM7P47150 247 aa3.85□□□□□ -1.79
SDC25YLL016W BCH2P36122 765 aa3.83□□□□□ -1.8
SDC25YLL016W SET1P38827 1080 aaKnown RBP3.83□□□□□ -1.8
SDC25YLL016W ATG2P53855 1592 aa3.82□□□□□ -1.8
SDC25YLL016W YCF1P39109 1515 aaKnown RBP3.82□□□□□ -1.8
SDC25YLL016W MRPL32P25348 183 aa3.82□□□□□ -1.8
SDC25YLL016W SSK2P53599 1579 aa3.82□□□□□ -1.8
SDC25YLL016W KIN1P13185 1064 aa3.81□□□□□ -1.8
SDC25YLL016W IFH1P39520 1085 aa3.8□□□□□ -1.8
SDC25YLL016W MYO2P19524 1574 aaKnown RBP3.79□□□□□ -1.8
SDC25YLL016W XRN1P22147 1528 aaKnown RBP3.77□□□□□ -1.81
SDC25YLL016W YML020WQ03722 664 aa3.77□□□□□ -1.81
SDC25YLL016W LTE1P07866 1435 aa3.76□□□□□ -1.81
SDC25YLL016W RAM2P29703 316 aa3.76□□□□□ -1.81
SDC25YLL016W GLC3P32775 704 aa3.76□□□□□ -1.81
SDC25YLL016W PBS2P08018 668 aa3.76□□□□□ -1.81
SDC25YLL016W MET5P47169 1442 aa3.76□□□□□ -1.81
SDC25YLL016W YNR021WP53723 404 aaKnown RBP3.75□□□□□ -1.81
SDC25YLL016W YPR148CQ06523 435 aa3.75□□□□□ -1.81
SDC25YLL016W AI2P03876 854 aa3.75□□□□□ -1.81
SDC25YLL016W MAP2P38174 421 aaKnown RBP3.75□□□□□ -1.81
SDC25YLL016W PSD2P53037 1138 aaKnown RBP3.75□□□□□ -1.81
SDC25YLL016W DSF2P38213 736 aa3.75□□□□□ -1.81
SDC25YLL016W NAP1P25293 417 aaKnown RBP3.73□□□□□ -1.81
SDC25YLL016W YFR006WP43590 535 aa3.73□□□□□ -1.81
SDC25YLL016W RPA190P10964 1664 aaKnown RBP3.73□□□□□ -1.81
SDC25YLL016W ESC1Q03661 1658 aaKnown RBP3.73□□□□□ -1.81
SDC25YLL016W SLX8P40072 274 aa3.73□□□□□ -1.81
SDC25YLL016W BBC1P47068 1157 aa3.72□□□□□ -1.81
SDC25YLL016W TAF2P23255 1407 aa3.72□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms