RNA–Protein interactions for RNA: YKR065C

PAM17, Transcript of Constituent of the TIM23 complex, yeast

Gene PAM17, Length 594 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM17	YKR065C	KIP2	P28743	706 aa		12	□□□□□ -0.49
PAM17	YKR065C	BRE2	P43132	505 aa		12	□□□□□ -0.49
PAM17	YKR065C	GCR2	Q01722	534 aa		12	□□□□□ -0.49
PAM17	YKR065C	IXR1	P33417	597 aa		11.98	□□□□□ -0.49
PAM17	YKR065C	LEO1	P38439	464 aa		11.98	□□□□□ -0.49
PAM17	YKR065C	VAC17	P25591	423 aa		11.97	□□□□□ -0.49
PAM17	YKR065C	AFT1	P22149	690 aa		11.96	□□□□□ -0.49
PAM17	YKR065C	HST3	P53687	447 aa		11.95	□□□□□ -0.5
PAM17	YKR065C	ASH1	P34233	588 aa		11.94	□□□□□ -0.5
PAM17	YKR065C	SIN3	P22579	1536 aa		11.94	□□□□□ -0.5
PAM17	YKR065C	BRL1	P38770	471 aa		11.93	□□□□□ -0.5
PAM17	YKR065C	MDS3	P53094	1487 aa		11.91	□□□□□ -0.5
PAM17	YKR065C	MAK16	P10962	306 aa	Predicted RBP	11.91	□□□□□ -0.5
PAM17	YKR065C	CSE4	P36012	229 aa		11.9	□□□□□ -0.5
PAM17	YKR065C	MRT4	P33201	236 aa	Known RBP	11.89	□□□□□ -0.51
PAM17	YKR065C	FIG4	P42837	879 aa		11.87	□□□□□ -0.51
PAM17	YKR065C	TFB3	Q03290	321 aa		11.87	□□□□□ -0.51
PAM17	YKR065C	RTT106	P40161	455 aa		11.86	□□□□□ -0.51
PAM17	YKR065C	MSB3	P48566	633 aa	Predicted RBP	11.86	□□□□□ -0.51
PAM17	YKR065C	NAF1	P53919	492 aa	Known RBP	11.86	□□□□□ -0.51
PAM17	YKR065C	TAF2	P23255	1407 aa		11.85	□□□□□ -0.51
PAM17	YKR065C	TEC1	P18412	486 aa		11.84	□□□□□ -0.51
PAM17	YKR065C	PEP1	P32319	1579 aa		11.83	□□□□□ -0.52
PAM17	YKR065C	ATG2	P53855	1592 aa		11.83	□□□□□ -0.52
PAM17	YKR065C	YBL036C	P38197	257 aa		11.82	□□□□□ -0.52
PAM17	YKR065C	SSK2	P53599	1579 aa		11.81	□□□□□ -0.52
PAM17	YKR065C	SKI3	P17883	1432 aa	Known RBP	11.8	□□□□□ -0.52
PAM17	YKR065C	SPT5	P27692	1063 aa	Known RBP	11.8	□□□□□ -0.52
PAM17	YKR065C	UGA3	P26370	528 aa		11.79	□□□□□ -0.52
PAM17	YKR065C	YJR115W	P47152	169 aa		11.78	□□□□□ -0.52
PAM17	YKR065C	EMW1	P42842	904 aa	Known RBP	11.77	□□□□□ -0.53
PAM17	YKR065C	HGH1	P48362	394 aa	Known RBP	11.77	□□□□□ -0.53
PAM17	YKR065C	YPR084W	Q06821	456 aa		11.77	□□□□□ -0.53
PAM17	YKR065C	PKC1	P24583	1151 aa		11.75	□□□□□ -0.53
PAM17	YKR065C	GUT2	P32191	649 aa		11.75	□□□□□ -0.53
PAM17	YKR065C	YBL086C	P38177	466 aa		11.73	□□□□□ -0.53
PAM17	YKR065C	ESP1	Q03018	1630 aa		11.72	□□□□□ -0.53
PAM17	YKR065C	APP1	P53933	587 aa		11.71	□□□□□ -0.53
PAM17	YKR065C	ITT1	Q04638	464 aa		11.71	□□□□□ -0.53
PAM17	YKR065C	FRA1	Q07825	749 aa		11.71	□□□□□ -0.53
PAM17	YKR065C	MYO2	P19524	1574 aa	Known RBP	11.71	□□□□□ -0.54
PAM17	YKR065C	PTK2	P47116	818 aa	Known RBP	11.7	□□□□□ -0.54
PAM17	YKR065C	ENV9	Q08651	330 aa		11.7	□□□□□ -0.54
PAM17	YKR065C	MET22	P32179	357 aa		11.69	□□□□□ -0.54
PAM17	YKR065C	STE20	Q03497	939 aa	Known RBP	11.69	□□□□□ -0.54
PAM17	YKR065C	SRF1	Q12516	437 aa		11.69	□□□□□ -0.54
PAM17	YKR065C	MRX12	P47084	519 aa		11.66	□□□□□ -0.54
PAM17	YKR065C	YPK9	Q12697	1472 aa		11.65	□□□□□ -0.54
PAM17	YKR065C	BIO2	P32451	375 aa		11.65	□□□□□ -0.54
PAM17	YKR065C	YDR444W	Q04093	687 aa		11.65	□□□□□ -0.54
PAM17	YKR065C	MCM16	Q12262	181 aa		11.65	□□□□□ -0.54
PAM17	YKR065C	MKS1	P34072	584 aa		11.64	□□□□□ -0.55
PAM17	YKR065C	ARG82	P07250	355 aa		11.62	□□□□□ -0.55
PAM17	YKR065C	YDJ1	P25491	409 aa	Known RBP	11.62	□□□□□ -0.55
PAM17	YKR065C	LCB5	Q06147	687 aa	Known RBP	11.62	□□□□□ -0.55
PAM17	YKR065C	GAR1	P28007	205 aa	Known RBP	11.61	□□□□□ -0.55
PAM17	YKR065C	NUP85	P46673	744 aa		11.61	□□□□□ -0.55
PAM17	YKR065C	YPP1	P46951	817 aa		11.61	□□□□□ -0.55
PAM17	YKR065C	BPT1	P14772	1559 aa		11.59	□□□□□ -0.55
PAM17	YKR065C	FBP26	P32604	452 aa		11.59	□□□□□ -0.55
PAM17	YKR065C	EMP47	P43555	445 aa		11.59	□□□□□ -0.55
PAM17	YKR065C	SUP45	P12385	437 aa	Known RBP	11.58	□□□□□ -0.56
PAM17	YKR065C	AAD14	P42884	376 aa		11.58	□□□□□ -0.56
PAM17	YKR065C	YLR346C	Q06139	101 aa		11.58	□□□□□ -0.56
PAM17	YKR065C	YJL007C	P47080	104 aa		11.57	□□□□□ -0.56
PAM17	YKR065C	ATG20	Q07528	640 aa		11.57	□□□□□ -0.56
PAM17	YKR065C	DFG5	Q05031	458 aa		11.56	□□□□□ -0.56
PAM17	YKR065C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	11.55	□□□□□ -0.56	not detected
PAM17	YKR065C	APL6	P46682	809 aa		11.55	□□□□□ -0.56
PAM17	YKR065C	YNL108C	P53929	270 aa		11.55	□□□□□ -0.56
PAM17	YKR065C	ISF1	P32488	338 aa		11.54	□□□□□ -0.56
PAM17	YKR065C	BDS1	Q08347	646 aa		11.54	□□□□□ -0.56
PAM17	YKR065C	UFD4	P33202	1483 aa		11.54	□□□□□ -0.56
PAM17	YKR065C	SCC2	Q04002	1493 aa		11.53	□□□□□ -0.56
PAM17	YKR065C	STE6	P12866	1290 aa		11.53	□□□□□ -0.56
PAM17	YKR065C	RPO31	P04051	1460 aa		11.52	□□□□□ -0.56
PAM17	YKR065C	ATG3	P40344	310 aa		11.52	□□□□□ -0.57
PAM17	YKR065C	ISU1	Q03020	165 aa		11.52	□□□□□ -0.57
PAM17	YKR065C	OPT2	Q06593	877 aa		11.52	□□□□□ -0.57
PAM17	YKR065C	ENO2	P00925	437 aa	Known RBP	11.5	□□□□□ -0.57
PAM17	YKR065C	LSC2	P53312	427 aa		11.5	□□□□□ -0.57
PAM17	YKR065C	RPP2B	P02400	110 aa	Known RBP	11.49	□□□□□ -0.57
PAM17	YKR065C	BIM1	P40013	344 aa		11.49	□□□□□ -0.57
PAM17	YKR065C	GLY1	P37303	387 aa	Known RBP	11.48	□□□□□ -0.57
PAM17	YKR065C	UTP13	Q05946	817 aa	Known RBP	11.48	□□□□□ -0.57
PAM17	YKR065C	RIM21	P48565	533 aa		11.47	□□□□□ -0.57
PAM17	YKR065C	YPL062W	Q02781	134 aa		11.47	□□□□□ -0.57
PAM17	YKR065C	MIP1	P15801	1254 aa		11.46	□□□□□ -0.57
PAM17	YKR065C	ISR1	Q06098	443 aa	Known RBP	11.46	□□□□□ -0.57
PAM17	YKR065C	ATG32	P40458	529 aa		11.45	□□□□□ -0.58
PAM17	YKR065C	POL1	P13382	1468 aa		11.44	□□□□□ -0.58
PAM17	YKR065C	RGA1	P39083	1007 aa		11.44	□□□□□ -0.58
PAM17	YKR065C	RPL34B	P40525	121 aa	Known RBP	11.44	□□□□□ -0.58
PAM17	YKR065C	YJR098C	P47139	656 aa		11.44	□□□□□ -0.58
PAM17	YKR065C	TIF1	P10081	395 aa	Known RBP	11.43	□□□□□ -0.58
PAM17	YKR065C	DLD1	P32891	587 aa		11.43	□□□□□ -0.58
PAM17	YKR065C	DMA2	P53924	522 aa		11.43	□□□□□ -0.58
PAM17	YKR065C	UBP2	Q01476	1272 aa		11.43	□□□□□ -0.58
PAM17	YKR065C	TOP2	P06786	1428 aa	Known RBP	11.43	□□□□□ -0.58
PAM17	YKR065C	SCW11	P53189	542 aa		11.41	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms