RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W FPK1P53739 893 aa4.76□□□□□ -1.65
NUP85YJR042W ALD6P54115 500 aaKnown RBP4.76□□□□□ -1.65
NUP85YJR042W YDL121CQ07541 149 aa4.76□□□□□ -1.65
NUP85YJR042W RGR1P19263 1082 aa4.75□□□□□ -1.65
NUP85YJR042W NAB3P38996 802 aaKnown RBP RIP-Chip data4.75□□□□□ -1.65not detected
NUP85YJR042W YFR006WP43590 535 aa4.75□□□□□ -1.65
NUP85YJR042W NSE3Q05541 303 aa4.75□□□□□ -1.65
NUP85YJR042W SIS2P36024 562 aa4.74□□□□□ -1.65
NUP85YJR042W GRS1P38088 690 aaKnown RBP4.74□□□□□ -1.65
NUP85YJR042W PBP2P38151 413 aaKnown RBP RIP-Chip data4.74□□□□□ -1.65not detected
NUP85YJR042W MTO1P53070 669 aa4.74□□□□□ -1.65
NUP85YJR042W KIP3P53086 805 aaKnown RBP4.74□□□□□ -1.65
NUP85YJR042W AIM21P40563 679 aa4.74□□□□□ -1.65
NUP85YJR042W YMR1P47147 688 aaKnown RBP RIP-Chip data4.74□□□□□ -1.65not detected
NUP85YJR042W DNM1P54861 757 aa4.74□□□□□ -1.65
NUP85YJR042W PKH3Q03306 898 aaPredicted RBP4.74□□□□□ -1.65
NUP85YJR042W VPS16Q03308 798 aa4.74□□□□□ -1.65
NUP85YJR042W NUT2Q06213 157 aa4.74□□□□□ -1.65
NUP85YJR042W VMA4P22203 233 aaKnown RBP4.73□□□□□ -1.65
NUP85YJR042W SRP40P32583 406 aaPredicted RBP4.73□□□□□ -1.65
NUP85YJR042W YKL091CP33324 310 aaKnown RBP4.73□□□□□ -1.65
NUP85YJR042W SOL3P38858 249 aa4.73□□□□□ -1.65
NUP85YJR042W TFG1P41895 735 aaPredicted RBP4.73□□□□□ -1.65
NUP85YJR042W RTF1P53064 558 aa4.73□□□□□ -1.65
NUP85YJR042W PPM2Q08282 695 aa4.73□□□□□ -1.65
NUP85YJR042W ECM5Q03214 1411 aa4.73□□□□□ -1.65
NUP85YJR042W DNA2P38859 1522 aa4.73□□□□□ -1.65
NUP85YJR042W MPE1P35728 441 aaKnown RBP4.73□□□□□ -1.65
NUP85YJR042W UBP12P39538 1254 aa4.73□□□□□ -1.65
NUP85YJR042W BOI2P39969 1040 aa4.73□□□□□ -1.65
NUP85YJR042W CWC22P53333 577 aaKnown RBP4.73□□□□□ -1.65
NUP85YJR042W KAR5Q04746 504 aa4.73□□□□□ -1.65
NUP85YJR042W RKR1Q04781 1562 aa4.72□□□□□ -1.65
NUP85YJR042W DBP1P24784 617 aaKnown RBP4.72□□□□□ -1.65
NUP85YJR042W UBP3Q01477 912 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65not detected
NUP85YJR042W TOA1P32773 286 aa4.72□□□□□ -1.65
NUP85YJR042W SPR28Q04921 423 aa4.72□□□□□ -1.65
NUP85YJR042W BDF2Q07442 638 aa4.72□□□□□ -1.65
NUP85YJR042W MYO4P32492 1471 aa4.72□□□□□ -1.65
NUP85YJR042W YOR1P53049 1477 aa4.72□□□□□ -1.65
NUP85YJR042W GAP1P19145 602 aaPredicted RBP4.71□□□□□ -1.66
NUP85YJR042W FUI1P38196 639 aa4.71□□□□□ -1.66
NUP85YJR042W ATG1P53104 897 aa4.71□□□□□ -1.66
NUP85YJR042W GPI13Q07830 1017 aa4.71□□□□□ -1.66
NUP85YJR042W PIN2Q12057 282 aa4.71□□□□□ -1.66
NUP85YJR042W PEP1P32319 1579 aa4.71□□□□□ -1.66
NUP85YJR042W RAD2P07276 1031 aa4.7□□□□□ -1.66
NUP85YJR042W BOI1P38041 980 aaKnown RBP4.7□□□□□ -1.66
NUP85YJR042W UBX7P38349 436 aa4.7□□□□□ -1.66
NUP85YJR042W TY4A-JP47023 414 aa4.7□□□□□ -1.66
NUP85YJR042W BPT1P14772 1559 aa4.7□□□□□ -1.66
NUP85YJR042W UFD4P33202 1483 aa4.7□□□□□ -1.66
NUP85YJR042W SCC2Q04002 1493 aa4.7□□□□□ -1.66
NUP85YJR042W GAL2P13181 574 aa4.7□□□□□ -1.66
NUP85YJR042W MCM2P29469 868 aa4.7□□□□□ -1.66
NUP85YJR042W GLO3P38682 493 aaKnown RBP4.7□□□□□ -1.66
NUP85YJR042W MVP1P40959 511 aaKnown RBP4.7□□□□□ -1.66
NUP85YJR042W PUF6Q04373 656 aaKnown RBP4.7□□□□□ -1.66
NUP85YJR042W KTR7P40504 517 aa4.69□□□□□ -1.66
NUP85YJR042W YGR273CP53329 174 aa4.69□□□□□ -1.66
NUP85YJR042W NST1P53935 1240 aa4.69□□□□□ -1.66
NUP85YJR042W GIR2Q03768 265 aaPredicted RBP4.69□□□□□ -1.66
NUP85YJR042W RPO31P04051 1460 aa4.69□□□□□ -1.66
NUP85YJR042W SEC6P32844 805 aa4.69□□□□□ -1.66
NUP85YJR042W NFU1P32860 256 aa4.69□□□□□ -1.66
NUP85YJR042W MNN1P39106 762 aa4.69□□□□□ -1.66
NUP85YJR042W ECM16Q04217 1267 aaKnown RBP4.69□□□□□ -1.66
NUP85YJR042W POB3Q04636 552 aaKnown RBP4.69□□□□□ -1.66
NUP85YJR042W MMP1Q12372 583 aa4.69□□□□□ -1.66
NUP85YJR042W SMC4Q12267 1418 aa4.68□□□□□ -1.66
NUP85YJR042W SIT4P20604 311 aa4.68□□□□□ -1.66
NUP85YJR042W SPT5P27692 1063 aaKnown RBP4.68□□□□□ -1.66
NUP85YJR042W CDC11P32458 415 aa4.68□□□□□ -1.66
NUP85YJR042W THI12P42883 340 aa4.68□□□□□ -1.66
NUP85YJR042W THI5P43534 340 aa4.68□□□□□ -1.66
NUP85YJR042W THI11P47183 340 aa4.68□□□□□ -1.66
NUP85YJR042W THI13Q07748 340 aa4.68□□□□□ -1.66
NUP85YJR042W MDS3P53094 1487 aa4.67□□□□□ -1.66
NUP85YJR042W TOP2P06786 1428 aaKnown RBP4.67□□□□□ -1.66
NUP85YJR042W RAD54P32863 898 aa4.66□□□□□ -1.66
NUP85YJR042W POL5P39985 1022 aaKnown RBP4.66□□□□□ -1.66
NUP85YJR042W YEN1P40028 759 aa4.66□□□□□ -1.66
NUP85YJR042W ROM1P53046 1155 aa4.66□□□□□ -1.66
NUP85YJR042W TY2B-LR1P0C2J3 1770 aa4.66□□□□□ -1.66
NUP85YJR042W TY2B-FP0CX63 1770 aa4.66□□□□□ -1.66
NUP85YJR042W TY2B-GR2P0CX64 1770 aa4.66□□□□□ -1.66
NUP85YJR042W TY2B-CP25384 1770 aa4.66□□□□□ -1.66
NUP85YJR042W TY2B-DR2Q03494 1770 aa4.66□□□□□ -1.66
NUP85YJR042W TY1B-DR1Q03855 1755 aa4.66□□□□□ -1.66
NUP85YJR042W TY2B-DR3Q07791 1770 aaKnown RBP4.66□□□□□ -1.66
NUP85YJR042W TY2B-OR1Q12113 1770 aa4.66□□□□□ -1.66
NUP85YJR042W TY2B-DR1Q12472 1770 aa4.66□□□□□ -1.66
NUP85YJR042W TY2B-OR2Q12501 1770 aa4.66□□□□□ -1.66
NUP85YJR042W TY1B-DR3Q99231 1755 aa4.66□□□□□ -1.66
NUP85YJR042W ERP2P39704 215 aa4.66□□□□□ -1.66
NUP85YJR042W TOS4Q06266 489 aa4.66□□□□□ -1.66
NUP85YJR042W TRM732Q03496 1420 aa4.66□□□□□ -1.66
NUP85YJR042W STI1P15705 589 aaKnown RBP RIP-Chip data4.65□□□□□ -1.66not detected
NUP85YJR042W ARG8P18544 423 aa4.65□□□□□ -1.66
NUP85YJR042W QDR1P40475 563 aa4.65□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms