RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W RTT106P40161 455 aa4.99□□□□□ -1.61
MSL1YIR009W SSA2P10592 639 aaKnown RBP4.98□□□□□ -1.61
MSL1YIR009W RPN1P38764 993 aaKnown RBP4.97□□□□□ -1.61
MSL1YIR009W FIG4P42837 879 aa4.97□□□□□ -1.61
MSL1YIR009W ITT1Q04638 464 aa4.97□□□□□ -1.61
MSL1YIR009W YDL176WQ12027 708 aa4.97□□□□□ -1.61
MSL1YIR009W YBL086CP38177 466 aa4.96□□□□□ -1.62
MSL1YIR009W EMW1P42842 904 aaKnown RBP4.96□□□□□ -1.62
MSL1YIR009W NUP85P46673 744 aa4.95□□□□□ -1.62
MSL1YIR009W APP1P53933 587 aa4.95□□□□□ -1.62
MSL1YIR009W SRF1Q12516 437 aa4.95□□□□□ -1.62
MSL1YIR009W MAK16P10962 306 aaPredicted RBP4.94□□□□□ -1.62
MSL1YIR009W GUA1P38625 525 aaKnown RBP4.94□□□□□ -1.62
MSL1YIR009W OPT2Q06593 877 aa4.94□□□□□ -1.62
MSL1YIR009W YPR084WQ06821 456 aa4.94□□□□□ -1.62
MSL1YIR009W TEC1P18412 486 aa4.93□□□□□ -1.62
MSL1YIR009W GLY1P37303 387 aaKnown RBP4.92□□□□□ -1.62
MSL1YIR009W ACO2P39533 789 aa4.92□□□□□ -1.62
MSL1YIR009W AAD14P42884 376 aa4.92□□□□□ -1.62
MSL1YIR009W YLR346CQ06139 101 aa4.92□□□□□ -1.62
MSL1YIR009W ARG82P07250 355 aa4.91□□□□□ -1.62
MSL1YIR009W NAF1P53919 492 aaKnown RBP4.9□□□□□ -1.63
MSL1YIR009W MKS1P34072 584 aa4.89□□□□□ -1.63
MSL1YIR009W CAF120P53836 1060 aa4.89□□□□□ -1.63
MSL1YIR009W HPC2Q01448 625 aa4.89□□□□□ -1.63
MSL1YIR009W MIP1P15801 1254 aa4.88□□□□□ -1.63
MSL1YIR009W GUT2P32191 649 aa4.88□□□□□ -1.63
MSL1YIR009W SCW11P53189 542 aa4.88□□□□□ -1.63
MSL1YIR009W LSC2P53312 427 aa4.88□□□□□ -1.63
MSL1YIR009W DFG5Q05031 458 aa4.88□□□□□ -1.63
MSL1YIR009W TY1A-BLQ12266 440 aa4.88□□□□□ -1.63
MSL1YIR009W FBP26P32604 452 aa4.87□□□□□ -1.63
MSL1YIR009W DLD1P32891 587 aa4.87□□□□□ -1.63
MSL1YIR009W CSE4P36012 229 aa4.87□□□□□ -1.63
MSL1YIR009W YJR098CP47139 656 aa4.87□□□□□ -1.63
MSL1YIR009W FRA1Q07825 749 aa4.86□□□□□ -1.63
MSL1YIR009W STE6P12866 1290 aa4.85□□□□□ -1.63
MSL1YIR009W YIR007WP40566 764 aa4.85□□□□□ -1.63
MSL1YIR009W UBP2Q01476 1272 aa4.85□□□□□ -1.63
MSL1YIR009W STE20Q03497 939 aaKnown RBP4.85□□□□□ -1.63
MSL1YIR009W TCB1Q12466 1186 aa4.85□□□□□ -1.63
MSL1YIR009W TFB3Q03290 321 aa4.84□□□□□ -1.63
MSL1YIR009W BDS1Q08347 646 aa4.84□□□□□ -1.63
MSL1YIR009W SPT5P27692 1063 aaKnown RBP4.83□□□□□ -1.64
MSL1YIR009W YBL036CP38197 257 aa4.83□□□□□ -1.64
MSL1YIR009W BRL1P38770 471 aa4.83□□□□□ -1.64
MSL1YIR009W ATG20Q07528 640 aa4.83□□□□□ -1.64
MSL1YIR009W ISU1Q03020 165 aa4.82□□□□□ -1.64
MSL1YIR009W MCM16Q12262 181 aa4.82□□□□□ -1.64
MSL1YIR009W PKC1P24583 1151 aa4.81□□□□□ -1.64
MSL1YIR009W OSH7P38755 437 aa4.81□□□□□ -1.64
MSL1YIR009W APL6P46682 809 aa4.81□□□□□ -1.64
MSL1YIR009W MRX12P47084 519 aa4.81□□□□□ -1.64
MSL1YIR009W YDJ1P25491 409 aaKnown RBP4.8□□□□□ -1.64
MSL1YIR009W ISF1P32488 338 aa4.8□□□□□ -1.64
MSL1YIR009W EMP47P43555 445 aa4.8□□□□□ -1.64
MSL1YIR009W BIO2P32451 375 aa4.79□□□□□ -1.64
MSL1YIR009W ROG3P43602 733 aa4.79□□□□□ -1.64
MSL1YIR009W YGR035CP53222 116 aa4.79□□□□□ -1.64
MSL1YIR009W TY1A-MR1Q04215 440 aa4.79□□□□□ -1.64
MSL1YIR009W VTC4P47075 721 aa4.78□□□□□ -1.64
MSL1YIR009W HPF1Q05164 967 aa4.78□□□□□ -1.64
MSL1YIR009W CCP1P00431 361 aa4.77□□□□□ -1.65
MSL1YIR009W CDC19P00549 500 aaKnown RBP4.77□□□□□ -1.65
MSL1YIR009W TRK2P28584 889 aa4.77□□□□□ -1.65
MSL1YIR009W ISR1Q06098 443 aaKnown RBP4.77□□□□□ -1.65
MSL1YIR009W RPP2BP02400 110 aaKnown RBP4.76□□□□□ -1.65
MSL1YIR009W SPT2P06843 333 aaPredicted RBP4.76□□□□□ -1.65
MSL1YIR009W SUP45P12385 437 aaKnown RBP4.76□□□□□ -1.65
MSL1YIR009W DAL1P32375 460 aa4.75□□□□□ -1.65
MSL1YIR009W HAL5P38970 855 aaKnown RBP4.75□□□□□ -1.65
MSL1YIR009W DLD3P39976 496 aaKnown RBP4.75□□□□□ -1.65
MSL1YIR009W NAM8Q00539 523 aaKnown RBP4.75□□□□□ -1.65
MSL1YIR009W WTM2Q12206 467 aa4.75□□□□□ -1.65
MSL1YIR009W ENO2P00925 437 aaKnown RBP4.74□□□□□ -1.65
MSL1YIR009W UTR2P32623 467 aa4.74□□□□□ -1.65
MSL1YIR009W YPP1P46951 817 aa4.74□□□□□ -1.65
MSL1YIR009W YNL108CP53929 270 aa4.74□□□□□ -1.65
MSL1YIR009W UTP13Q05946 817 aaKnown RBP4.74□□□□□ -1.65
MSL1YIR009W DAT1P13483 248 aaKnown RBP4.72□□□□□ -1.65
MSL1YIR009W SOH1P38633 127 aa4.72□□□□□ -1.65
MSL1YIR009W SSN3P39073 555 aa4.72□□□□□ -1.65
MSL1YIR009W ATG3P40344 310 aa4.72□□□□□ -1.65
MSL1YIR009W DPH6Q12429 685 aa4.72□□□□□ -1.65
MSL1YIR009W SLA1P32790 1244 aa4.71□□□□□ -1.66
MSL1YIR009W RIM21P48565 533 aa4.71□□□□□ -1.66
MSL1YIR009W LYS5P50113 272 aa4.71□□□□□ -1.66
MSL1YIR009W MSN5P52918 1224 aa4.71□□□□□ -1.66
MSL1YIR009W TBS1P38114 1094 aa4.7□□□□□ -1.66
MSL1YIR009W SLX8P40072 274 aa4.7□□□□□ -1.66
MSL1YIR009W YJL007CP47080 104 aa4.7□□□□□ -1.66
MSL1YIR009W TY1A-DR3Q12441 440 aa4.7□□□□□ -1.66
MSL1YIR009W RDS2P19541 446 aaKnown RBP4.69□□□□□ -1.66
MSL1YIR009W JJJ3P47138 172 aa4.69□□□□□ -1.66
MSL1YIR009W UBP15P50101 1230 aa4.69□□□□□ -1.66
MSL1YIR009W CUZ1P53899 274 aa4.69□□□□□ -1.66
MSL1YIR009W HDA3Q06623 655 aa4.69□□□□□ -1.66
MSL1YIR009W YPR204WQ08995 1032 aa4.69□□□□□ -1.66
MSL1YIR009W UTP7P40055 554 aaKnown RBP4.68□□□□□ -1.66
MSL1YIR009W SUM1P46676 1062 aa4.68□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 41.3 ms