RNA–Protein interactions for RNA: YIL013C

PDR11, Transcript of ATP-binding cassette (ABC) transporter, yeast

Gene PDR11, Length 4,236 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR11	YIL013C	SSP2	Q08646	371 aa		2.99	□□□□□ -1.93
PDR11	YIL013C	SIS2	P36024	562 aa		2.99	□□□□□ -1.93
PDR11	YIL013C	RCR1	P38212	213 aa		2.99	□□□□□ -1.93
PDR11	YIL013C	DSD1	P53095	428 aa		2.99	□□□□□ -1.93
PDR11	YIL013C	DIB1	Q06819	143 aa	Predicted RBP	2.99	□□□□□ -1.93
PDR11	YIL013C	RAD2	P07276	1031 aa		2.98	□□□□□ -1.93
PDR11	YIL013C	SER1	P33330	395 aa	Known RBP	2.98	□□□□□ -1.93
PDR11	YIL013C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
PDR11	YIL013C	PSD2	P53037	1138 aa	Known RBP	2.98	□□□□□ -1.93
PDR11	YIL013C	VPS64	Q03944	604 aa		2.98	□□□□□ -1.93
PDR11	YIL013C	YDL144C	Q07589	356 aa		2.98	□□□□□ -1.93
PDR11	YIL013C	CDC45	Q08032	650 aa		2.98	□□□□□ -1.93
PDR11	YIL013C	DOT5	P40553	215 aa		2.98	□□□□□ -1.93
PDR11	YIL013C	NOP53	Q12080	455 aa	Known RBP	2.98	□□□□□ -1.93
PDR11	YIL013C	YBR287W	P38355	427 aa		2.98	□□□□□ -1.93
PDR11	YIL013C	ENP2	P48234	707 aa	Known RBP	2.98	□□□□□ -1.93
PDR11	YIL013C	YML133C	Q03099	1374 aa		2.97	□□□□□ -1.93
PDR11	YIL013C	YLL067C	Q07888	1374 aa		2.97	□□□□□ -1.93
PDR11	YIL013C	YLL066C	Q99208	1374 aa		2.97	□□□□□ -1.93
PDR11	YIL013C	GYP7	P48365	746 aa		2.97	□□□□□ -1.93
PDR11	YIL013C	RPP0	P05317	312 aa	Known RBP	2.97	□□□□□ -1.93
PDR11	YIL013C	RPS9B	P05755	195 aa	Known RBP	2.97	□□□□□ -1.93
PDR11	YIL013C	RAD4	P14736	754 aa		2.97	□□□□□ -1.93
PDR11	YIL013C	VPS27	P40343	622 aa	Known RBP	2.97	□□□□□ -1.93
PDR11	YIL013C	YRB30	P53107	440 aa	Predicted RBP	2.97	□□□□□ -1.93
PDR11	YIL013C	UTP22	P53254	1237 aa	Predicted RBP	2.97	□□□□□ -1.93
PDR11	YIL013C	MSN5	P52918	1224 aa		2.97	□□□□□ -1.93
PDR11	YIL013C	HIM1	Q06674	414 aa		2.97	□□□□□ -1.93
PDR11	YIL013C	NCB2	Q92317	146 aa		2.97	□□□□□ -1.93
PDR11	YIL013C	OSM1	P21375	501 aa	Known RBP	2.96	□□□□□ -1.94
PDR11	YIL013C	RPG1	P38249	964 aa	Known RBP	2.96	□□□□□ -1.94
PDR11	YIL013C	RAT1	Q02792	1006 aa	Known RBP	2.96	□□□□□ -1.94
PDR11	YIL013C	SIR4	P11978	1358 aa		2.96	□□□□□ -1.94
PDR11	YIL013C	NUP192	P47054	1683 aa		2.96	□□□□□ -1.94
PDR11	YIL013C	TEA1	P47988	759 aa		2.96	□□□□□ -1.94
PDR11	YIL013C	LPD1	P09624	499 aa	Known RBP	2.96	□□□□□ -1.94
PDR11	YIL013C	SAS4	Q04003	481 aa		2.96	□□□□□ -1.94
PDR11	YIL013C	DAL5	P15365	543 aa		2.95	□□□□□ -1.94
PDR11	YIL013C	TPD3	P31383	635 aa		2.95	□□□□□ -1.94
PDR11	YIL013C	YER156C	P40093	338 aa	Known RBP	2.95	□□□□□ -1.94
PDR11	YIL013C	YNL050C	P53952	270 aa		2.95	□□□□□ -1.94
PDR11	YIL013C	MPP10	P47083	593 aa	Known RBP	2.95	□□□□□ -1.94
PDR11	YIL013C	FOX2	Q02207	900 aa	Known RBP	2.95	□□□□□ -1.94
PDR11	YIL013C	ALE1	Q08548	619 aa		2.95	□□□□□ -1.94
PDR11	YIL013C	SNU66	Q12420	587 aa	Predicted RBP	2.95	□□□□□ -1.94
PDR11	YIL013C	NST1	P53935	1240 aa		2.95	□□□□□ -1.94
PDR11	YIL013C	BMS1	Q08965	1183 aa	Known RBP	2.95	□□□□□ -1.94
PDR11	YIL013C	CTT1	P06115	562 aa		2.95	□□□□□ -1.94
PDR11	YIL013C	ADE16	P54113	591 aa	Known RBP	2.95	□□□□□ -1.94
PDR11	YIL013C	GRE2	Q12068	342 aa	Known RBP	2.95	□□□□□ -1.94
PDR11	YIL013C	AIM7	Q12156	149 aa		2.95	□□□□□ -1.94
PDR11	YIL013C	YGL082W	P53155	381 aa		2.94	□□□□□ -1.94
PDR11	YIL013C	DNM1	P54861	757 aa		2.94	□□□□□ -1.94
PDR11	YIL013C	UBX2	Q04228	584 aa		2.94	□□□□□ -1.94
PDR11	YIL013C	GRX6	Q12438	231 aa		2.94	□□□□□ -1.94
PDR11	YIL013C	NTH2	P35172	780 aa		2.94	□□□□□ -1.94
PDR11	YIL013C	YKL222C	P35995	705 aa		2.94	□□□□□ -1.94
PDR11	YIL013C	RPN1	P38764	993 aa	Known RBP	2.94	□□□□□ -1.94
PDR11	YIL013C	LYS4	P49367	693 aa	Predicted RBP	2.94	□□□□□ -1.94
PDR11	YIL013C	BDF2	Q07442	638 aa		2.94	□□□□□ -1.94
PDR11	YIL013C	CTI6	Q08923	506 aa		2.94	□□□□□ -1.94
PDR11	YIL013C	TPM1	P17536	199 aa	Known RBP	2.93	□□□□□ -1.94
PDR11	YIL013C	NUP133	P36161	1157 aa		2.93	□□□□□ -1.94
PDR11	YIL013C	ECM16	Q04217	1267 aa	Known RBP	2.93	□□□□□ -1.94
PDR11	YIL013C	INP54	Q08227	384 aa	Known RBP	2.93	□□□□□ -1.94
PDR11	YIL013C	PHM7	Q12252	991 aa		2.93	□□□□□ -1.94
PDR11	YIL013C	RRI2	Q12348	645 aa		2.93	□□□□□ -1.94
PDR11	YIL013C	MLP1	Q02455	1875 aa	Known RBP	2.93	□□□□□ -1.94
PDR11	YIL013C	TOP1	P04786	769 aa		2.93	□□□□□ -1.94
PDR11	YIL013C	PRD1	P25375	712 aa		2.93	□□□□□ -1.94
PDR11	YIL013C	SRC1	Q03707	834 aa		2.93	□□□□□ -1.94
PDR11	YIL013C	MRP7	P12687	371 aa		2.93	□□□□□ -1.94
PDR11	YIL013C	IOC4	Q04213	475 aa		2.92	□□□□□ -1.94
PDR11	YIL013C	HAT1	Q12341	374 aa		2.92	□□□□□ -1.94
PDR11	YIL013C	NUP145	P49687	1317 aa		2.92	□□□□□ -1.94
PDR11	YIL013C	TRK1	P12685	1235 aa		2.92	□□□□□ -1.94
PDR11	YIL013C	BDP1	P46678	594 aa		2.92	□□□□□ -1.94
PDR11	YIL013C	PSF3	Q12146	194 aa		2.92	□□□□□ -1.94
PDR11	YIL013C	CST6	P40535	587 aa		2.92	□□□□□ -1.94
PDR11	YIL013C	SQS1	P53866	767 aa	Known RBP	2.92	□□□□□ -1.94
PDR11	YIL013C	RRP5	Q05022	1729 aa	Known RBP	2.92	□□□□□ -1.94
PDR11	YIL013C	YKR075C	P36155	307 aa		2.92	□□□□□ -1.94
PDR11	YIL013C	RRP8	P38961	392 aa	Known RBP	2.92	□□□□□ -1.94
PDR11	YIL013C	CRF1	Q04930	467 aa		2.92	□□□□□ -1.94
PDR11	YIL013C	PSH1	Q12161	406 aa		2.92	□□□□□ -1.94
PDR11	YIL013C	MSM1	P22438	575 aa		2.91	□□□□□ -1.94
PDR11	YIL013C	FAP1	P53971	965 aa		2.91	□□□□□ -1.94
PDR11	YIL013C	RIX7	Q07844	837 aa	Known RBP	2.91	□□□□□ -1.94
PDR11	YIL013C	SSA1	P10591	642 aa	Known RBP	2.91	□□□□□ -1.94
PDR11	YIL013C	PFF1	P38244	976 aa		2.91	□□□□□ -1.94
PDR11	YIL013C	SLI15	P38283	698 aa		2.91	□□□□□ -1.94
PDR11	YIL013C	SSF1	P38789	453 aa	Predicted RBP	2.91	□□□□□ -1.94
PDR11	YIL013C	CWH41	P53008	833 aa		2.91	□□□□□ -1.94
PDR11	YIL013C	NPR2	P39923	615 aa		2.91	□□□□□ -1.94
PDR11	YIL013C	YOL057W	Q08225	711 aa		2.91	□□□□□ -1.94
PDR11	YIL013C	YKU70	P32807	602 aa		2.9	□□□□□ -1.94
PDR11	YIL013C	NMD2	P38798	1089 aa	Known RBP	2.9	□□□□□ -1.94
PDR11	YIL013C	YPP1	P46951	817 aa		2.9	□□□□□ -1.94
PDR11	YIL013C	HGH1	P48362	394 aa	Known RBP	2.9	□□□□□ -1.94
PDR11	YIL013C	YNG2	P38806	282 aa	Known RBP	2.9	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms