RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A YPR084WQ06821 456 aa7.25□□□□□ -1.25
EFG1YGR271C-A YBL086CP38177 466 aa7.23□□□□□ -1.25
EFG1YGR271C-A EMW1P42842 904 aaKnown RBP7.23□□□□□ -1.25
EFG1YGR271C-A YPL062WQ02781 134 aa7.23□□□□□ -1.25
EFG1YGR271C-A NAF1P53919 492 aaKnown RBP7.22□□□□□ -1.25
EFG1YGR271C-A YDR444WQ04093 687 aa7.22□□□□□ -1.25
EFG1YGR271C-A RGA2Q06407 1009 aa7.22□□□□□ -1.25
EFG1YGR271C-A UGA3P26370 528 aa7.21□□□□□ -1.26
EFG1YGR271C-A PTK2P47116 818 aaKnown RBP7.21□□□□□ -1.26
EFG1YGR271C-A TEC1P18412 486 aa7.2□□□□□ -1.26
EFG1YGR271C-A CSE4P36012 229 aa7.19□□□□□ -1.26
EFG1YGR271C-A GAR1P28007 205 aaKnown RBP7.17□□□□□ -1.26
EFG1YGR271C-A NUP85P46673 744 aa7.16□□□□□ -1.26
EFG1YGR271C-A YDL176WQ12027 708 aa7.16□□□□□ -1.26
EFG1YGR271C-A SPT5P27692 1063 aaKnown RBP7.15□□□□□ -1.26
EFG1YGR271C-A AAD14P42884 376 aa7.15□□□□□ -1.26
EFG1YGR271C-A ITT1Q04638 464 aa7.15□□□□□ -1.26
EFG1YGR271C-A FRA1Q07825 749 aa7.15□□□□□ -1.26
EFG1YGR271C-A GUT2P32191 649 aa7.13□□□□□ -1.27
EFG1YGR271C-A APP1P53933 587 aa7.13□□□□□ -1.27
EFG1YGR271C-A ARG82P07250 355 aa7.12□□□□□ -1.27
EFG1YGR271C-A GLY1P37303 387 aaKnown RBP7.12□□□□□ -1.27
EFG1YGR271C-A TFB3Q03290 321 aa7.12□□□□□ -1.27
EFG1YGR271C-A OPT2Q06593 877 aa7.12□□□□□ -1.27
EFG1YGR271C-A SRF1Q12516 437 aa7.12□□□□□ -1.27
EFG1YGR271C-A MKS1P34072 584 aa7.11□□□□□ -1.27
EFG1YGR271C-A BRL1P38770 471 aa7.11□□□□□ -1.27
EFG1YGR271C-A ACO2P39533 789 aa7.11□□□□□ -1.27
EFG1YGR271C-A APL6P46682 809 aa7.11□□□□□ -1.27
EFG1YGR271C-A FBP26P32604 452 aa7.1□□□□□ -1.27
EFG1YGR271C-A MRX12P47084 519 aa7.1□□□□□ -1.27
EFG1YGR271C-A YLR346CQ06139 101 aa7.09□□□□□ -1.27
EFG1YGR271C-A STE6P12866 1290 aa7.08□□□□□ -1.28
EFG1YGR271C-A GBP2P25555 427 aaKnown RBP RIP-Chip data7.08□□□□□ -1.28not detected
EFG1YGR271C-A YBL036CP38197 257 aa7.08□□□□□ -1.28
EFG1YGR271C-A STE20Q03497 939 aaKnown RBP7.07□□□□□ -1.28
EFG1YGR271C-A DFG5Q05031 458 aa7.07□□□□□ -1.28
EFG1YGR271C-A MCM16Q12262 181 aa7.07□□□□□ -1.28
EFG1YGR271C-A PKC1P24583 1151 aa7.06□□□□□ -1.28
EFG1YGR271C-A BIO2P32451 375 aa7.06□□□□□ -1.28
EFG1YGR271C-A YJR098CP47139 656 aa7.06□□□□□ -1.28
EFG1YGR271C-A LSC2P53312 427 aa7.06□□□□□ -1.28
EFG1YGR271C-A TY1A-BLQ12266 440 aa7.06□□□□□ -1.28
EFG1YGR271C-A MIP1P15801 1254 aa7.05□□□□□ -1.28
EFG1YGR271C-A ATG20Q07528 640 aa7.04□□□□□ -1.28
EFG1YGR271C-A SCW11P53189 542 aa7.03□□□□□ -1.28
EFG1YGR271C-A ISU1Q03020 165 aa7.03□□□□□ -1.28
EFG1YGR271C-A SUP45P12385 437 aaKnown RBP7.02□□□□□ -1.29
EFG1YGR271C-A YDJ1P25491 409 aaKnown RBP7.02□□□□□ -1.29
EFG1YGR271C-A BDS1Q08347 646 aa7.02□□□□□ -1.29
EFG1YGR271C-A EMP47P43555 445 aa7.01□□□□□ -1.29
EFG1YGR271C-A VTC4P47075 721 aa7.01□□□□□ -1.29
EFG1YGR271C-A CAF120P53836 1060 aa7.01□□□□□ -1.29
EFG1YGR271C-A UBP2Q01476 1272 aa7.01□□□□□ -1.29
EFG1YGR271C-A DLD1P32891 587 aa7□□□□□ -1.29
EFG1YGR271C-A LEO1P38439 464 aa7□□□□□ -1.29
EFG1YGR271C-A YPP1P46951 817 aa7□□□□□ -1.29
EFG1YGR271C-A UTP13Q05946 817 aaKnown RBP7□□□□□ -1.29
EFG1YGR271C-A SPT2P06843 333 aaPredicted RBP6.99□□□□□ -1.29
EFG1YGR271C-A YIR007WP40566 764 aa6.99□□□□□ -1.29
EFG1YGR271C-A TCB1Q12466 1186 aa6.98□□□□□ -1.29
EFG1YGR271C-A RPP2BP02400 110 aaKnown RBP6.97□□□□□ -1.29
EFG1YGR271C-A ISF1P32488 338 aa6.97□□□□□ -1.29
EFG1YGR271C-A RIM21P48565 533 aa6.96□□□□□ -1.3
EFG1YGR271C-A ENO2P00925 437 aaKnown RBP6.95□□□□□ -1.3
EFG1YGR271C-A HAL5P38970 855 aaKnown RBP6.95□□□□□ -1.3
EFG1YGR271C-A ISR1Q06098 443 aaKnown RBP6.95□□□□□ -1.3
EFG1YGR271C-A OSH7P38755 437 aa6.94□□□□□ -1.3
EFG1YGR271C-A ATG3P40344 310 aa6.94□□□□□ -1.3
EFG1YGR271C-A TY1A-MR1Q04215 440 aa6.94□□□□□ -1.3
EFG1YGR271C-A CCP1P00431 361 aa6.93□□□□□ -1.3
EFG1YGR271C-A CDC19P00549 500 aaKnown RBP6.93□□□□□ -1.3
EFG1YGR271C-A DAL1P32375 460 aa6.93□□□□□ -1.3
EFG1YGR271C-A ROG3P43602 733 aa6.93□□□□□ -1.3
EFG1YGR271C-A YNL108CP53929 270 aa6.93□□□□□ -1.3
EFG1YGR271C-A RDS2P19541 446 aaKnown RBP6.92□□□□□ -1.3
EFG1YGR271C-A WTM2Q12206 467 aa6.92□□□□□ -1.3
EFG1YGR271C-A UTR2P32623 467 aa6.91□□□□□ -1.3
EFG1YGR271C-A DLD3P39976 496 aaKnown RBP6.9□□□□□ -1.3
EFG1YGR271C-A HGH1P48362 394 aaKnown RBP6.9□□□□□ -1.3
EFG1YGR271C-A MRX10Q05648 414 aa6.9□□□□□ -1.3
EFG1YGR271C-A SOH1P38633 127 aa6.89□□□□□ -1.31
EFG1YGR271C-A YJL007CP47080 104 aa6.89□□□□□ -1.31
EFG1YGR271C-A MSN5P52918 1224 aa6.89□□□□□ -1.31
EFG1YGR271C-A SLA1P32790 1244 aa6.88□□□□□ -1.31
EFG1YGR271C-A BIM1P40013 344 aa6.88□□□□□ -1.31
EFG1YGR271C-A SLX8P40072 274 aa6.88□□□□□ -1.31
EFG1YGR271C-A YGR035CP53222 116 aa6.88□□□□□ -1.31
EFG1YGR271C-A NAM8Q00539 523 aaKnown RBP6.88□□□□□ -1.31
EFG1YGR271C-A HPF1Q05164 967 aa6.88□□□□□ -1.31
EFG1YGR271C-A SSN3P39073 555 aa6.87□□□□□ -1.31
EFG1YGR271C-A ATG32P40458 529 aa6.86□□□□□ -1.31
EFG1YGR271C-A HDA3Q06623 655 aa6.86□□□□□ -1.31
EFG1YGR271C-A TIF1P10081 395 aaKnown RBP6.85□□□□□ -1.31
EFG1YGR271C-A TY1A-DR3Q12441 440 aa6.85□□□□□ -1.31
EFG1YGR271C-A TBS1P38114 1094 aa6.84□□□□□ -1.31
EFG1YGR271C-A SUM1P46676 1062 aa6.84□□□□□ -1.31
EFG1YGR271C-A UBP15P50101 1230 aa6.84□□□□□ -1.31
EFG1YGR271C-A ENO1P00924 437 aaKnown RBP6.83□□□□□ -1.32
EFG1YGR271C-A DAT1P13483 248 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms