RNA–Protein interactions for RNA: YDR228C

PCF11, Transcript of mRNA 3' end processing factor, yeastyeast

Gene PCF11, Length 1,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCF11YDR228C MAK16P10962 306 aaPredicted RBP4.64□□□□□ -1.67
PCF11YDR228C EMW1P42842 904 aaKnown RBP4.63□□□□□ -1.67
PCF11YDR228C YBL086CP38177 466 aa4.62□□□□□ -1.67
PCF11YDR228C YDR444WQ04093 687 aa4.62□□□□□ -1.67
PCF11YDR228C LCB5Q06147 687 aaKnown RBP4.62□□□□□ -1.67
PCF11YDR228C UGA3P26370 528 aa4.62□□□□□ -1.67
PCF11YDR228C PTK2P47116 818 aaKnown RBP4.62□□□□□ -1.67
PCF11YDR228C YPL062WQ02781 134 aa4.62□□□□□ -1.67
PCF11YDR228C CSE4P36012 229 aa4.61□□□□□ -1.67
PCF11YDR228C NAF1P53919 492 aaKnown RBP4.61□□□□□ -1.67
PCF11YDR228C ITT1Q04638 464 aa4.6□□□□□ -1.67
PCF11YDR228C TEC1P18412 486 aa4.6□□□□□ -1.67
PCF11YDR228C GAR1P28007 205 aaKnown RBP4.59□□□□□ -1.67
PCF11YDR228C YDL176WQ12027 708 aa4.59□□□□□ -1.67
PCF11YDR228C NUP85P46673 744 aa4.58□□□□□ -1.68
PCF11YDR228C APP1P53933 587 aa4.58□□□□□ -1.68
PCF11YDR228C FRA1Q07825 749 aa4.58□□□□□ -1.68
PCF11YDR228C TFB3Q03290 321 aa4.57□□□□□ -1.68
PCF11YDR228C OPT2Q06593 877 aa4.57□□□□□ -1.68
PCF11YDR228C GUT2P32191 649 aa4.56□□□□□ -1.68
PCF11YDR228C AAD14P42884 376 aa4.56□□□□□ -1.68
PCF11YDR228C SPT5P27692 1063 aaKnown RBP4.56□□□□□ -1.68
PCF11YDR228C ACO2P39533 789 aa4.56□□□□□ -1.68
PCF11YDR228C SRF1Q12516 437 aa4.56□□□□□ -1.68
PCF11YDR228C ARG82P07250 355 aa4.55□□□□□ -1.68
PCF11YDR228C APL6P46682 809 aa4.55□□□□□ -1.68
PCF11YDR228C PKC1P24583 1151 aa4.54□□□□□ -1.68
PCF11YDR228C FBP26P32604 452 aa4.54□□□□□ -1.68
PCF11YDR228C MKS1P34072 584 aa4.54□□□□□ -1.68
PCF11YDR228C GLY1P37303 387 aaKnown RBP4.54□□□□□ -1.68
PCF11YDR228C BRL1P38770 471 aa4.54□□□□□ -1.68
PCF11YDR228C STE6P12866 1290 aa4.54□□□□□ -1.68
PCF11YDR228C YBL036CP38197 257 aa4.54□□□□□ -1.68
PCF11YDR228C YLR346CQ06139 101 aa4.54□□□□□ -1.68
PCF11YDR228C MRX12P47084 519 aa4.53□□□□□ -1.68
PCF11YDR228C STE20Q03497 939 aaKnown RBP4.53□□□□□ -1.68
PCF11YDR228C YDJ1P25491 409 aaKnown RBP4.52□□□□□ -1.69
PCF11YDR228C GBP2P25555 427 aaKnown RBP RIP-Chip data4.52□□□□□ -1.69not detected
PCF11YDR228C DFG5Q05031 458 aa4.52□□□□□ -1.69
PCF11YDR228C TY1A-BLQ12266 440 aa4.52□□□□□ -1.69
PCF11YDR228C YJR098CP47139 656 aa4.52□□□□□ -1.69
PCF11YDR228C MCM16Q12262 181 aa4.52□□□□□ -1.69
PCF11YDR228C SUP45P12385 437 aaKnown RBP4.51□□□□□ -1.69
PCF11YDR228C MIP1P15801 1254 aa4.51□□□□□ -1.69
PCF11YDR228C BIO2P32451 375 aa4.51□□□□□ -1.69
PCF11YDR228C LEO1P38439 464 aa4.51□□□□□ -1.69
PCF11YDR228C LSC2P53312 427 aa4.51□□□□□ -1.69
PCF11YDR228C ISU1Q03020 165 aa4.51□□□□□ -1.69
PCF11YDR228C ATG20Q07528 640 aa4.51□□□□□ -1.69
PCF11YDR228C EMP47P43555 445 aa4.5□□□□□ -1.69
PCF11YDR228C BDS1Q08347 646 aa4.5□□□□□ -1.69
PCF11YDR228C SCW11P53189 542 aa4.49□□□□□ -1.69
PCF11YDR228C UBP2Q01476 1272 aa4.49□□□□□ -1.69
PCF11YDR228C DLD1P32891 587 aa4.49□□□□□ -1.69
PCF11YDR228C CAF120P53836 1060 aa4.48□□□□□ -1.69
PCF11YDR228C ISF1P32488 338 aa4.47□□□□□ -1.69
PCF11YDR228C VTC4P47075 721 aa4.47□□□□□ -1.69
PCF11YDR228C UTP13Q05946 817 aaKnown RBP4.47□□□□□ -1.69
PCF11YDR228C SPT2P06843 333 aaPredicted RBP4.47□□□□□ -1.69
PCF11YDR228C YIR007WP40566 764 aa4.47□□□□□ -1.69
PCF11YDR228C YPP1P46951 817 aa4.47□□□□□ -1.69
PCF11YDR228C TCB1Q12466 1186 aa4.47□□□□□ -1.69
PCF11YDR228C ENO2P00925 437 aaKnown RBP4.45□□□□□ -1.7
PCF11YDR228C OSH7P38755 437 aa4.45□□□□□ -1.7
PCF11YDR228C HAL5P38970 855 aaKnown RBP4.45□□□□□ -1.7
PCF11YDR228C RIM21P48565 533 aa4.45□□□□□ -1.7
PCF11YDR228C ISR1Q06098 443 aaKnown RBP4.45□□□□□ -1.7
PCF11YDR228C YNL108CP53929 270 aa4.45□□□□□ -1.7
PCF11YDR228C RDS2P19541 446 aaKnown RBP4.44□□□□□ -1.7
PCF11YDR228C DAL1P32375 460 aa4.44□□□□□ -1.7
PCF11YDR228C CCP1P00431 361 aa4.43□□□□□ -1.7
PCF11YDR228C RPP2BP02400 110 aaKnown RBP4.43□□□□□ -1.7
PCF11YDR228C YJL007CP47080 104 aa4.43□□□□□ -1.7
PCF11YDR228C TY1A-MR1Q04215 440 aa4.43□□□□□ -1.7
PCF11YDR228C CDC19P00549 500 aaKnown RBP4.43□□□□□ -1.7
PCF11YDR228C ROG3P43602 733 aa4.43□□□□□ -1.7
PCF11YDR228C MRX10Q05648 414 aa4.43□□□□□ -1.7
PCF11YDR228C BIM1P40013 344 aa4.42□□□□□ -1.7
PCF11YDR228C ATG3P40344 310 aa4.42□□□□□ -1.7
PCF11YDR228C WTM2Q12206 467 aa4.42□□□□□ -1.7
PCF11YDR228C SSN3P39073 555 aa4.41□□□□□ -1.7
PCF11YDR228C MSN5P52918 1224 aa4.41□□□□□ -1.7
PCF11YDR228C NAM8Q00539 523 aaKnown RBP4.41□□□□□ -1.7
PCF11YDR228C HPF1Q05164 967 aa4.41□□□□□ -1.7
PCF11YDR228C UTR2P32623 467 aa4.41□□□□□ -1.7
PCF11YDR228C SLA1P32790 1244 aa4.41□□□□□ -1.7
PCF11YDR228C SOH1P38633 127 aa4.41□□□□□ -1.7
PCF11YDR228C DLD3P39976 496 aaKnown RBP4.41□□□□□ -1.7
PCF11YDR228C ATG32P40458 529 aa4.41□□□□□ -1.7
PCF11YDR228C HGH1P48362 394 aaKnown RBP4.41□□□□□ -1.7
PCF11YDR228C HDA3Q06623 655 aa4.41□□□□□ -1.7
PCF11YDR228C TIF1P10081 395 aaKnown RBP4.4□□□□□ -1.71
PCF11YDR228C SLX8P40072 274 aa4.4□□□□□ -1.71
PCF11YDR228C TRK2P28584 889 aa4.39□□□□□ -1.71
PCF11YDR228C PEP12P32854 288 aa4.38□□□□□ -1.71
PCF11YDR228C SUM1P46676 1062 aa4.38□□□□□ -1.71
PCF11YDR228C YGR035CP53222 116 aa4.38□□□□□ -1.71
PCF11YDR228C TY1A-DR3Q12441 440 aa4.38□□□□□ -1.71
PCF11YDR228C ENO1P00924 437 aaKnown RBP4.37□□□□□ -1.71
PCF11YDR228C DAT1P13483 248 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms