RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	MAK16	P10962	306 aa	Predicted RBP	8.57	□□□□□ -1.04
RPC53	YDL150W	HPC2	Q01448	625 aa		8.57	□□□□□ -1.04
RPC53	YDL150W	YPL062W	Q02781	134 aa		8.57	□□□□□ -1.04
RPC53	YDL150W	YDR444W	Q04093	687 aa		8.57	□□□□□ -1.04
RPC53	YDL150W	UGA3	P26370	528 aa		8.56	□□□□□ -1.04
RPC53	YDL150W	GAR1	P28007	205 aa	Known RBP	8.55	□□□□□ -1.04
RPC53	YDL150W	YBL086C	P38177	466 aa		8.55	□□□□□ -1.04
RPC53	YDL150W	EMW1	P42842	904 aa	Known RBP	8.55	□□□□□ -1.04
RPC53	YDL150W	PTK2	P47116	818 aa	Known RBP	8.55	□□□□□ -1.04
RPC53	YDL150W	YPR084W	Q06821	456 aa		8.55	□□□□□ -1.04
RPC53	YDL150W	NAF1	P53919	492 aa	Known RBP	8.53	□□□□□ -1.04
RPC53	YDL150W	TEC1	P18412	486 aa		8.52	□□□□□ -1.05
RPC53	YDL150W	CSE4	P36012	229 aa		8.51	□□□□□ -1.05
RPC53	YDL150W	LEO1	P38439	464 aa		8.5	□□□□□ -1.05
RPC53	YDL150W	NUP85	P46673	744 aa		8.5	□□□□□ -1.05
RPC53	YDL150W	ITT1	Q04638	464 aa		8.48	□□□□□ -1.05
RPC53	YDL150W	RGA2	Q06407	1009 aa		8.48	□□□□□ -1.05
RPC53	YDL150W	APP1	P53933	587 aa		8.47	□□□□□ -1.05
RPC53	YDL150W	YDL176W	Q12027	708 aa		8.47	□□□□□ -1.05
RPC53	YDL150W	SRF1	Q12516	437 aa		8.47	□□□□□ -1.05
RPC53	YDL150W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	8.46	□□□□□ -1.06	not detected
RPC53	YDL150W	GUT2	P32191	649 aa		8.45	□□□□□ -1.06
RPC53	YDL150W	AAD14	P42884	376 aa		8.45	□□□□□ -1.06
RPC53	YDL150W	DNA2	P38859	1522 aa		8.44	□□□□□ -1.06
RPC53	YDL150W	ARG82	P07250	355 aa		8.44	□□□□□ -1.06
RPC53	YDL150W	SPT5	P27692	1063 aa	Known RBP	8.44	□□□□□ -1.06
RPC53	YDL150W	OPT2	Q06593	877 aa		8.44	□□□□□ -1.06
RPC53	YDL150W	FRA1	Q07825	749 aa		8.44	□□□□□ -1.06
RPC53	YDL150W	GLY1	P37303	387 aa	Known RBP	8.43	□□□□□ -1.06
RPC53	YDL150W	YLR346C	Q06139	101 aa		8.43	□□□□□ -1.06
RPC53	YDL150W	MKS1	P34072	584 aa		8.42	□□□□□ -1.06
RPC53	YDL150W	BRL1	P38770	471 aa		8.42	□□□□□ -1.06
RPC53	YDL150W	ACO2	P39533	789 aa		8.42	□□□□□ -1.06
RPC53	YDL150W	TFB3	Q03290	321 aa		8.42	□□□□□ -1.06
RPC53	YDL150W	FBP26	P32604	452 aa		8.4	□□□□□ -1.06
RPC53	YDL150W	YBL036C	P38197	257 aa		8.39	□□□□□ -1.07
RPC53	YDL150W	STE6	P12866	1290 aa		8.38	□□□□□ -1.07
RPC53	YDL150W	MRX12	P47084	519 aa		8.38	□□□□□ -1.07
RPC53	YDL150W	LSC2	P53312	427 aa		8.38	□□□□□ -1.07
RPC53	YDL150W	STE20	Q03497	939 aa	Known RBP	8.38	□□□□□ -1.07
RPC53	YDL150W	DFG5	Q05031	458 aa		8.38	□□□□□ -1.07
RPC53	YDL150W	APL6	P46682	809 aa		8.37	□□□□□ -1.07
RPC53	YDL150W	SWR1	Q05471	1514 aa		8.36	□□□□□ -1.07
RPC53	YDL150W	MIP1	P15801	1254 aa		8.36	□□□□□ -1.07
RPC53	YDL150W	PKC1	P24583	1151 aa		8.36	□□□□□ -1.07
RPC53	YDL150W	YJR098C	P47139	656 aa		8.36	□□□□□ -1.07
RPC53	YDL150W	TY1A-BL	Q12266	440 aa		8.36	□□□□□ -1.07
RPC53	YDL150W	MCM16	Q12262	181 aa		8.35	□□□□□ -1.07
RPC53	YDL150W	SCW11	P53189	542 aa		8.34	□□□□□ -1.07
RPC53	YDL150W	ATG20	Q07528	640 aa		8.34	□□□□□ -1.07
RPC53	YDL150W	ISU1	Q03020	165 aa		8.33	□□□□□ -1.08
RPC53	YDL150W	BDS1	Q08347	646 aa		8.33	□□□□□ -1.08
RPC53	YDL150W	YDJ1	P25491	409 aa	Known RBP	8.32	□□□□□ -1.08
RPC53	YDL150W	BIO2	P32451	375 aa		8.32	□□□□□ -1.08
RPC53	YDL150W	UBP2	Q01476	1272 aa		8.32	□□□□□ -1.08
RPC53	YDL150W	SUP45	P12385	437 aa	Known RBP	8.31	□□□□□ -1.08
RPC53	YDL150W	DLD1	P32891	587 aa		8.31	□□□□□ -1.08
RPC53	YDL150W	EMP47	P43555	445 aa		8.31	□□□□□ -1.08
RPC53	YDL150W	CAF120	P53836	1060 aa		8.31	□□□□□ -1.08
RPC53	YDL150W	KOG1	P38873	1557 aa		8.3	□□□□□ -1.08
RPC53	YDL150W	TCB1	Q12466	1186 aa		8.29	□□□□□ -1.08
RPC53	YDL150W	YPP1	P46951	817 aa		8.28	□□□□□ -1.08
RPC53	YDL150W	YIR007W	P40566	764 aa		8.27	□□□□□ -1.09
RPC53	YDL150W	VTC4	P47075	721 aa		8.27	□□□□□ -1.09
RPC53	YDL150W	RPP2B	P02400	110 aa	Known RBP	8.26	□□□□□ -1.09
RPC53	YDL150W	SPT2	P06843	333 aa	Predicted RBP	8.26	□□□□□ -1.09
RPC53	YDL150W	ISF1	P32488	338 aa		8.26	□□□□□ -1.09
RPC53	YDL150W	UTP13	Q05946	817 aa	Known RBP	8.26	□□□□□ -1.09
RPC53	YDL150W	OSH7	P38755	437 aa		8.24	□□□□□ -1.09
RPC53	YDL150W	ISR1	Q06098	443 aa	Known RBP	8.23	□□□□□ -1.09
RPC53	YDL150W	ENO2	P00925	437 aa	Known RBP	8.22	□□□□□ -1.09
RPC53	YDL150W	ATG3	P40344	310 aa		8.22	□□□□□ -1.09
RPC53	YDL150W	YNL108C	P53929	270 aa		8.22	□□□□□ -1.09
RPC53	YDL150W	TCB3	Q03640	1545 aa	Known RBP	8.21	□□□□□ -1.1
RPC53	YDL150W	HAL5	P38970	855 aa	Known RBP	8.21	□□□□□ -1.1
RPC53	YDL150W	RIM21	P48565	533 aa		8.21	□□□□□ -1.1
RPC53	YDL150W	TY1A-MR1	Q04215	440 aa		8.21	□□□□□ -1.1
RPC53	YDL150W	CDC19	P00549	500 aa	Known RBP	8.2	□□□□□ -1.1
RPC53	YDL150W	DAL1	P32375	460 aa		8.2	□□□□□ -1.1
RPC53	YDL150W	ROG3	P43602	733 aa		8.2	□□□□□ -1.1
RPC53	YDL150W	TAF7	Q05021	590 aa		8.2	□□□□□ -1.1
RPC53	YDL150W	WTM2	Q12206	467 aa		8.2	□□□□□ -1.1
RPC53	YDL150W	DLD3	P39976	496 aa	Known RBP	8.19	□□□□□ -1.1
RPC53	YDL150W	HGH1	P48362	394 aa	Known RBP	8.19	□□□□□ -1.1
RPC53	YDL150W	CCP1	P00431	361 aa		8.18	□□□□□ -1.1
RPC53	YDL150W	UTR2	P32623	467 aa		8.18	□□□□□ -1.1
RPC53	YDL150W	YJL007C	P47080	104 aa		8.18	□□□□□ -1.1
RPC53	YDL150W	TY1B-DR4	Q07793	1604 aa		8.17	□□□□□ -1.1
RPC53	YDL150W	SOH1	P38633	127 aa		8.16	□□□□□ -1.1
RPC53	YDL150W	MSN5	P52918	1224 aa		8.16	□□□□□ -1.1
RPC53	YDL150W	YGR035C	P53222	116 aa		8.16	□□□□□ -1.1
RPC53	YDL150W	RDS2	P19541	446 aa	Known RBP	8.15	□□□□□ -1.1
RPC53	YDL150W	NAM8	Q00539	523 aa	Known RBP	8.15	□□□□□ -1.1
RPC53	YDL150W	HPF1	Q05164	967 aa		8.15	□□□□□ -1.1
RPC53	YDL150W	MRX10	Q05648	414 aa		8.15	□□□□□ -1.1
RPC53	YDL150W	SSN3	P39073	555 aa		8.14	□□□□□ -1.11
RPC53	YDL150W	BIM1	P40013	344 aa		8.14	□□□□□ -1.11
RPC53	YDL150W	SLX8	P40072	274 aa		8.13	□□□□□ -1.11
RPC53	YDL150W	DAT1	P13483	248 aa	Known RBP	8.12	□□□□□ -1.11
RPC53	YDL150W	TRK2	P28584	889 aa		8.12	□□□□□ -1.11

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms