RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W PDI1P17967 522 aaKnown RBP8.42□□□□□ -1.06
NUP84YDL116W SRS2P12954 1174 aa8.41□□□□□ -1.06
NUP84YDL116W DLD1P32891 587 aa8.41□□□□□ -1.06
NUP84YDL116W BRN1P38170 754 aa8.41□□□□□ -1.06
NUP84YDL116W RFC1P38630 861 aaKnown RBP8.41□□□□□ -1.06
NUP84YDL116W HXT13P39924 564 aa8.41□□□□□ -1.06
NUP84YDL116W DSD1P53095 428 aa8.41□□□□□ -1.06
NUP84YDL116W HXT17P53631 564 aa8.41□□□□□ -1.06
NUP84YDL116W DPS1P04802 557 aaKnown RBP8.41□□□□□ -1.06
NUP84YDL116W SCT1P32784 759 aa8.41□□□□□ -1.06
NUP84YDL116W CSI1Q04368 295 aa8.41□□□□□ -1.06
NUP84YDL116W USO1P25386 1790 aa8.4□□□□□ -1.06
NUP84YDL116W NPA3P47122 385 aa8.4□□□□□ -1.06
NUP84YDL116W RSC1P53236 928 aa8.39□□□□□ -1.07
NUP84YDL116W MAK21Q12176 1025 aaKnown RBP8.39□□□□□ -1.07
NUP84YDL116W BNI1P41832 1953 aa8.39□□□□□ -1.07
NUP84YDL116W PSK1P31374 1356 aa8.39□□□□□ -1.07
NUP84YDL116W RSM7P47150 247 aa8.39□□□□□ -1.07
NUP84YDL116W LEU2P04173 364 aaPredicted RBP8.38□□□□□ -1.07
NUP84YDL116W YNG2P38806 282 aaKnown RBP8.38□□□□□ -1.07
NUP84YDL116W MDG1P53885 366 aa8.38□□□□□ -1.07
NUP84YDL116W NMD2P38798 1089 aaKnown RBP8.38□□□□□ -1.07
NUP84YDL116W RMD1Q03441 430 aa8.38□□□□□ -1.07
NUP84YDL116W VPS20Q04272 221 aa8.37□□□□□ -1.07
NUP84YDL116W SRT1Q03175 343 aa8.37□□□□□ -1.07
NUP84YDL116W TAP42Q04372 366 aa8.37□□□□□ -1.07
NUP84YDL116W RAD50P12753 1312 aa8.35□□□□□ -1.07
NUP84YDL116W NUP145P49687 1317 aa8.35□□□□□ -1.07
NUP84YDL116W SWC3P31376 625 aa8.35□□□□□ -1.07
NUP84YDL116W AKL1P38080 1108 aaKnown RBP8.35□□□□□ -1.07
NUP84YDL116W VPS70P47161 811 aa8.35□□□□□ -1.07
NUP84YDL116W RTF1P53064 558 aa8.35□□□□□ -1.07
NUP84YDL116W EDE1P34216 1381 aa8.35□□□□□ -1.07
NUP84YDL116W CPS1P27614 576 aa8.35□□□□□ -1.07
NUP84YDL116W NOT3P06102 836 aaKnown RBP8.34□□□□□ -1.07
NUP84YDL116W SIR4P11978 1358 aa8.34□□□□□ -1.07
NUP84YDL116W APC1P53886 1748 aa8.34□□□□□ -1.07
NUP84YDL116W MCM2P29469 868 aa8.34□□□□□ -1.08
NUP84YDL116W RAD24P32641 659 aa8.34□□□□□ -1.08
NUP84YDL116W SET1P38827 1080 aaKnown RBP8.34□□□□□ -1.08
NUP84YDL116W URN1Q06525 465 aaKnown RBP8.34□□□□□ -1.08
NUP84YDL116W DID4P36108 232 aa8.33□□□□□ -1.08
NUP84YDL116W LSP1Q12230 341 aaKnown RBP8.33□□□□□ -1.08
NUP84YDL116W AIM44Q99299 758 aa8.33□□□□□ -1.08
NUP84YDL116W ENT3P47160 408 aa8.32□□□□□ -1.08
NUP84YDL116W GYP7P48365 746 aa8.32□□□□□ -1.08
NUP84YDL116W SSL2Q00578 843 aa8.32□□□□□ -1.08
NUP84YDL116W GCR2Q01722 534 aa8.32□□□□□ -1.08
NUP84YDL116W BDP1P46678 594 aa8.31□□□□□ -1.08
NUP84YDL116W COQ4O13525 335 aa8.3□□□□□ -1.08
NUP84YDL116W KIN1P13185 1064 aa8.3□□□□□ -1.08
NUP84YDL116W RVS167P39743 482 aaKnown RBP8.3□□□□□ -1.08
NUP84YDL116W ZDS1P50111 915 aaKnown RBP8.3□□□□□ -1.08
NUP84YDL116W YRF1-4O13559 1382 aa8.29□□□□□ -1.08
NUP84YDL116W RKM3P38222 552 aa8.29□□□□□ -1.08
NUP84YDL116W KRI1P42846 591 aaKnown RBP8.29□□□□□ -1.08
NUP84YDL116W MTR4P47047 1073 aaKnown RBP8.29□□□□□ -1.08
NUP84YDL116W BMS1Q08965 1183 aaKnown RBP8.29□□□□□ -1.08
NUP84YDL116W APC11Q12157 165 aa8.29□□□□□ -1.08
NUP84YDL116W RRP5Q05022 1729 aaKnown RBP8.29□□□□□ -1.08
NUP84YDL116W YIL177CP40434 1758 aa8.29□□□□□ -1.08
NUP84YDL116W YJL225CP40889 1758 aa8.29□□□□□ -1.08
NUP84YDL116W RPO41P13433 1351 aaKnown RBP8.29□□□□□ -1.08
NUP84YDL116W HSP104P31539 908 aaKnown RBP8.29□□□□□ -1.08
NUP84YDL116W GRX4P32642 244 aa8.29□□□□□ -1.08
NUP84YDL116W CIR1P42940 261 aa8.29□□□□□ -1.08
NUP84YDL116W LCD1Q04377 747 aa8.29□□□□□ -1.08
NUP84YDL116W RAM2P29703 316 aa8.28□□□□□ -1.08
NUP84YDL116W MFT1P33441 392 aaKnown RBP8.28□□□□□ -1.08
NUP84YDL116W ZDS2P54786 942 aa8.28□□□□□ -1.08
NUP84YDL116W YKR023WP36119 530 aaKnown RBP8.28□□□□□ -1.08
NUP84YDL116W ROM2P51862 1356 aaKnown RBP8.27□□□□□ -1.09
NUP84YDL116W VAS1P07806 1104 aaKnown RBP8.27□□□□□ -1.09
NUP84YDL116W NTH2P35172 780 aa8.27□□□□□ -1.09
NUP84YDL116W YNR029CP53729 429 aaKnown RBP8.27□□□□□ -1.09
NUP84YDL116W SLA1P32790 1244 aa8.27□□□□□ -1.09
NUP84YDL116W HAP5Q02516 242 aa8.27□□□□□ -1.09
NUP84YDL116W COG8Q04632 607 aa8.27□□□□□ -1.09
NUP84YDL116W TRL1P09880 827 aaKnown RBP8.26□□□□□ -1.09
NUP84YDL116W DSF2P38213 736 aa8.26□□□□□ -1.09
NUP84YDL116W CTI6Q08923 506 aa8.26□□□□□ -1.09
NUP84YDL116W MNR2P35724 969 aa8.25□□□□□ -1.09
NUP84YDL116W HRQ1Q05549 1077 aa8.25□□□□□ -1.09
NUP84YDL116W TFC8Q12308 588 aa8.25□□□□□ -1.09
NUP84YDL116W DUR1,2P32528 1835 aaKnown RBP8.25□□□□□ -1.09
NUP84YDL116W YNL050CP53952 270 aa8.25□□□□□ -1.09
NUP84YDL116W TSR3Q12094 313 aaKnown RBP8.25□□□□□ -1.09
NUP84YDL116W BIK1P11709 440 aa8.24□□□□□ -1.09
NUP84YDL116W RPN12P32496 274 aa8.24□□□□□ -1.09
NUP84YDL116W YML020WQ03722 664 aa8.24□□□□□ -1.09
NUP84YDL116W VMS1Q04311 632 aaKnown RBP8.24□□□□□ -1.09
NUP84YDL116W NOP8Q08287 484 aaPredicted RBP8.23□□□□□ -1.09
NUP84YDL116W NOP58Q12499 511 aaKnown RBP8.23□□□□□ -1.09
NUP84YDL116W MIC60P36112 540 aa8.22□□□□□ -1.09
NUP84YDL116W CWH41P53008 833 aa8.22□□□□□ -1.09
NUP84YDL116W YNR021WP53723 404 aaKnown RBP8.22□□□□□ -1.09
NUP84YDL116W TY4B-HP0C2J7 1802 aa8.22□□□□□ -1.09
NUP84YDL116W TY4B-JP47024 1803 aa8.22□□□□□ -1.09
NUP84YDL116W TRS33Q99394 268 aa8.22□□□□□ -1.09
NUP84YDL116W HGH1P48362 394 aaKnown RBP8.21□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms