RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeastyeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB2YDL084W ERP4Q12450 207 aa6.79□□□□□ -1.32
SUB2YDL084W VPS5Q92331 675 aa6.79□□□□□ -1.32
SUB2YDL084W SAC3P46674 1301 aa6.79□□□□□ -1.32
SUB2YDL084W RPL5P26321 297 aaKnown RBP6.78□□□□□ -1.32
SUB2YDL084W DEP1P31385 405 aa6.78□□□□□ -1.32
SUB2YDL084W MUM2P38236 366 aa6.78□□□□□ -1.32
SUB2YDL084W PRP43P53131 767 aaKnown RBP6.78□□□□□ -1.32
SUB2YDL084W RIA1P53893 1110 aa6.78□□□□□ -1.32
SUB2YDL084W ALD3P54114 506 aa6.78□□□□□ -1.32
SUB2YDL084W PWP2P25635 923 aaKnown RBP6.77□□□□□ -1.32
SUB2YDL084W TPM2P40414 161 aa6.77□□□□□ -1.32
SUB2YDL084W PRP3Q03338 469 aaPredicted RBP6.77□□□□□ -1.32
SUB2YDL084W ECM16Q04217 1267 aaKnown RBP6.77□□□□□ -1.32
SUB2YDL084W GRE2Q12068 342 aaKnown RBP6.77□□□□□ -1.32
SUB2YDL084W SGT2Q12118 346 aaKnown RBP6.77□□□□□ -1.32
SUB2YDL084W SUP35P05453 685 aaKnown RBP6.76□□□□□ -1.33
SUB2YDL084W OCA5P38738 679 aa6.76□□□□□ -1.33
SUB2YDL084W XDJ1P39102 459 aa6.76□□□□□ -1.33
SUB2YDL084W RSC2Q06488 889 aa6.76□□□□□ -1.33
SUB2YDL084W MSH3P25336 1018 aa6.76□□□□□ -1.33
SUB2YDL084W VRP1P37370 817 aa6.76□□□□□ -1.33
SUB2YDL084W VTC3Q02725 835 aa6.76□□□□□ -1.33
SUB2YDL084W PML39Q03760 334 aa6.76□□□□□ -1.33
SUB2YDL084W STE5P32917 917 aa6.75□□□□□ -1.33
SUB2YDL084W FAF1P40546 346 aaPredicted RBP6.75□□□□□ -1.33
SUB2YDL084W HUL5P53119 910 aa6.75□□□□□ -1.33
SUB2YDL084W YNL247WP53852 767 aaKnown RBP6.75□□□□□ -1.33
SUB2YDL084W JIP5Q06214 492 aaPredicted RBP6.75□□□□□ -1.33
SUB2YDL084W CEX1Q12453 761 aa6.75□□□□□ -1.33
SUB2YDL084W CLN1P20437 546 aa6.74□□□□□ -1.33
SUB2YDL084W RPC82P32349 654 aa6.74□□□□□ -1.33
SUB2YDL084W SIC1P38634 284 aa6.74□□□□□ -1.33
SUB2YDL084W CTF4Q01454 927 aa6.74□□□□□ -1.33
SUB2YDL084W ELP4Q02884 456 aaKnown RBP6.74□□□□□ -1.33
SUB2YDL084W COG8Q04632 607 aa6.74□□□□□ -1.33
SUB2YDL084W COG4Q06096 861 aa6.74□□□□□ -1.33
SUB2YDL084W APC5Q08683 685 aa6.74□□□□□ -1.33
SUB2YDL084W GLE1Q12315 538 aa6.74□□□□□ -1.33
SUB2YDL084W YDR344CQ05510 147 aa6.73□□□□□ -1.33
SUB2YDL084W ENT2Q05785 613 aa6.73□□□□□ -1.33
SUB2YDL084W YOR389WQ08912 624 aa6.73□□□□□ -1.33
SUB2YDL084W PPH3P32345 308 aa6.72□□□□□ -1.33
SUB2YDL084W MET1P36150 593 aa6.72□□□□□ -1.33
SUB2YDL084W VHR2P40041 505 aa6.72□□□□□ -1.33
SUB2YDL084W ALD4P46367 519 aaKnown RBP6.72□□□□□ -1.33
SUB2YDL084W BFA1P47113 574 aa6.72□□□□□ -1.33
SUB2YDL084W CCM1P48237 864 aaPredicted RBP6.72□□□□□ -1.33
SUB2YDL084W KEL2P50090 882 aa6.72□□□□□ -1.33
SUB2YDL084W NFI1Q12216 726 aa6.72□□□□□ -1.33
SUB2YDL084W LSP1Q12230 341 aaKnown RBP6.72□□□□□ -1.33
SUB2YDL084W KIN1P13185 1064 aa6.71□□□□□ -1.34
SUB2YDL084W RRN6P32786 894 aa6.71□□□□□ -1.34
SUB2YDL084W TCB1Q12466 1186 aa6.71□□□□□ -1.34
SUB2YDL084W MAL31P38156 614 aa6.7□□□□□ -1.34
SUB2YDL084W ATH1P48016 1211 aa6.7□□□□□ -1.34
SUB2YDL084W MDM1Q01846 1127 aa6.7□□□□□ -1.34
SUB2YDL084W ERV41Q04651 352 aa6.7□□□□□ -1.34
SUB2YDL084W RIX7Q07844 837 aaKnown RBP6.7□□□□□ -1.34
SUB2YDL084W CHD1P32657 1468 aa6.7□□□□□ -1.34
SUB2YDL084W CDC31P06704 161 aaKnown RBP6.69□□□□□ -1.34
SUB2YDL084W KAR1P11927 433 aa6.69□□□□□ -1.34
SUB2YDL084W GUT1P32190 709 aa6.69□□□□□ -1.34
SUB2YDL084W SWI3P32591 825 aa6.69□□□□□ -1.34
SUB2YDL084W NFU1P32860 256 aa6.69□□□□□ -1.34
SUB2YDL084W TFC3P34111 1160 aa6.69□□□□□ -1.34
SUB2YDL084W PEX5P35056 612 aa6.69□□□□□ -1.34
SUB2YDL084W MIF2P35201 549 aa6.69□□□□□ -1.34
SUB2YDL084W RPC37P36121 282 aa6.69□□□□□ -1.34
SUB2YDL084W GPI8P49018 411 aa6.69□□□□□ -1.34
SUB2YDL084W SRP1Q02821 542 aaKnown RBP6.69□□□□□ -1.34
SUB2YDL084W RRB1Q04225 511 aaKnown RBP6.69□□□□□ -1.34
SUB2YDL084W RUD3Q12234 484 aaKnown RBP6.69□□□□□ -1.34
SUB2YDL084W SNU66Q12420 587 aaPredicted RBP6.69□□□□□ -1.34
SUB2YDL084W MAK11P20484 414 aaKnown RBP6.68□□□□□ -1.34
SUB2YDL084W TSR4P25040 408 aa6.68□□□□□ -1.34
SUB2YDL084W SPB4P25808 606 aaPredicted RBP6.68□□□□□ -1.34
SUB2YDL084W BRF1P29056 596 aa6.68□□□□□ -1.34
SUB2YDL084W MRF1P30775 413 aaPredicted RBP6.68□□□□□ -1.34
SUB2YDL084W SMC3P47037 1230 aa6.68□□□□□ -1.34
SUB2YDL084W BNI4P53858 892 aa6.68□□□□□ -1.34
SUB2YDL084W NKP1Q12493 238 aa6.68□□□□□ -1.34
SUB2YDL084W CYB2P00175 591 aa6.67□□□□□ -1.34
SUB2YDL084W KEX1P09620 729 aa6.67□□□□□ -1.34
SUB2YDL084W SRP54P20424 541 aaKnown RBP6.67□□□□□ -1.34
SUB2YDL084W SEC6P32844 805 aa6.67□□□□□ -1.34
SUB2YDL084W SAS3P34218 831 aa6.67□□□□□ -1.34
SUB2YDL084W PTC3P34221 468 aaKnown RBP6.67□□□□□ -1.34
SUB2YDL084W TPS3P38426 1054 aaKnown RBP6.67□□□□□ -1.34
SUB2YDL084W PES4P39684 611 aa6.67□□□□□ -1.34
SUB2YDL084W IES2P40154 320 aa6.67□□□□□ -1.34
SUB2YDL084W MEP1P40260 492 aa6.67□□□□□ -1.34
SUB2YDL084W ARH1P48360 493 aa6.67□□□□□ -1.34
SUB2YDL084W ELA1P53861 379 aaPredicted RBP6.67□□□□□ -1.34
SUB2YDL084W PCL8Q08966 492 aa6.67□□□□□ -1.34
SUB2YDL084W SSF2Q12153 453 aaPredicted RBP6.67□□□□□ -1.34
SUB2YDL084W SGS1P35187 1447 aa6.66□□□□□ -1.34
SUB2YDL084W THR4P16120 514 aaKnown RBP6.66□□□□□ -1.34
SUB2YDL084W EFB1P32471 206 aaKnown RBP6.66□□□□□ -1.34
SUB2YDL084W RPN12P32496 274 aa6.66□□□□□ -1.34
SUB2YDL084W YHR218WP38899 603 aa6.66□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms