RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Ipo8Q7TMY7 1010 aa13.89□□□□□ -0.19
Scn8a-203ENSMUST00000108908 Ncoa2Q61026 1462 aa13.88□□□□□ -0.19
Scn8a-203ENSMUST00000108908 Shq1Q7TMX5 569 aa13.88□□□□□ -0.19
Scn8a-203ENSMUST00000108908 Inpp5dQ9ES52 1191 aa13.88□□□□□ -0.19
Scn8a-203ENSMUST00000108908 Soga1E1U8D0 1418 aa13.88□□□□□ -0.19
Scn8a-203ENSMUST00000108908 HdgfP51859 237 aaKnown RBP13.87□□□□□ -0.19
Scn8a-203ENSMUST00000108908 Chmp3Q9CQ10 224 aa13.87□□□□□ -0.19
Scn8a-203ENSMUST00000108908 Shroom4Q1W617 1475 aa13.87□□□□□ -0.19
Scn8a-203ENSMUST00000108908 Pak3Q61036 559 aa13.87□□□□□ -0.19
Scn8a-203ENSMUST00000108908 Smg6P61406 1418 aaKnown RBP13.87□□□□□ -0.19
Scn8a-203ENSMUST00000108908 Brpf1B2RRD7 1212 aa13.87□□□□□ -0.19
Scn8a-203ENSMUST00000108908 Dnttip2Q8R2M2 758 aaKnown RBP13.87□□□□□ -0.19
Scn8a-203ENSMUST00000108908 Iffo2Q8R2V2 512 aa13.86□□□□□ -0.19
Scn8a-203ENSMUST00000108908 CgnP59242 1191 aa13.86□□□□□ -0.19
Scn8a-203ENSMUST00000108908 Stard8Q8K031 1019 aa13.86□□□□□ -0.19
Scn8a-203ENSMUST00000108908 Mink1Q9JM52 1308 aa13.85□□□□□ -0.19
Scn8a-203ENSMUST00000108908 Ipo9Q91YE6 1041 aa13.85□□□□□ -0.19
Scn8a-203ENSMUST00000108908 Cabp4Q8VHC5 271 aa13.85□□□□□ -0.19
Scn8a-203ENSMUST00000108908 Rsph4aQ8BYM7 716 aa13.84□□□□□ -0.19
Scn8a-203ENSMUST00000108908 Pabpn1Q8CCS6 302 aaKnown RBP13.84□□□□□ -0.19
Scn8a-203ENSMUST00000108908 Tdrd9Q14BI7 1383 aa13.83□□□□□ -0.2
Scn8a-203ENSMUST00000108908 Pde3bQ61409 1100 aa13.83□□□□□ -0.2
Scn8a-203ENSMUST00000108908 Dapk1Q80YE7 1442 aa13.83□□□□□ -0.2
Scn8a-203ENSMUST00000108908 Slc4a10Q5DTL9 1118 aa13.82□□□□□ -0.2
Scn8a-203ENSMUST00000108908 Stk31Q99MW1 1018 aa13.82□□□□□ -0.2
Scn8a-203ENSMUST00000108908 Adam1bQ8R534 806 aa13.81□□□□□ -0.2
Scn8a-203ENSMUST00000108908 Kif7B7ZNG0 1348 aa13.8□□□□□ -0.2
Scn8a-203ENSMUST00000108908 Rad54l2Q99NG0 1466 aa13.8□□□□□ -0.2
Scn8a-203ENSMUST00000108908 GsdmaQ9EST1 446 aa13.8□□□□□ -0.2
Scn8a-203ENSMUST00000108908 Ccdc146E9Q9F7 977 aa13.79□□□□□ -0.2
Scn8a-203ENSMUST00000108908 Ccdc60Q8C4J0 545 aa13.78□□□□□ -0.2
Scn8a-203ENSMUST00000108908 Jph4Q80WT0 628 aa13.78□□□□□ -0.2
Scn8a-203ENSMUST00000108908 Arhgap5P97393 1501 aa13.78□□□□□ -0.2
Scn8a-203ENSMUST00000108908 Top2aQ01320 1528 aaKnown RBP13.78□□□□□ -0.2
Scn8a-203ENSMUST00000108908 ErbinQ80TH2 1402 aa13.78□□□□□ -0.2
Scn8a-203ENSMUST00000108908 ChgaP26339 463 aaKnown RBP13.78□□□□□ -0.2
Scn8a-203ENSMUST00000108908 PtmsQ9D0J8 101 aaKnown RBP13.77□□□□□ -0.2
Scn8a-203ENSMUST00000108908 Fam184bQ0KK56 942 aa13.76□□□□□ -0.21
Scn8a-203ENSMUST00000108908 Cc2d1aQ8K1A6 943 aa13.76□□□□□ -0.21
Scn8a-203ENSMUST00000108908 Smarce1O54941 411 aaKnown RBP13.76□□□□□ -0.21
Scn8a-203ENSMUST00000108908 CrebrfQ8CDG5 640 aaKnown RBP13.76□□□□□ -0.21
Scn8a-203ENSMUST00000108908 Rock1P70335 1354 aa13.76□□□□□ -0.21
Scn8a-203ENSMUST00000108908 Nolc1E9Q5C9 702 aaKnown RBP13.74□□□□□ -0.21
Scn8a-203ENSMUST00000108908 Mical1Q8VDP3 1048 aa13.74□□□□□ -0.21
Scn8a-203ENSMUST00000108908 Urb2E9Q7L1 1524 aaKnown RBP13.74□□□□□ -0.21
Scn8a-203ENSMUST00000108908 Esx1O88933 382 aa13.74□□□□□ -0.21
Scn8a-203ENSMUST00000108908 Gm21190A0A0G2JGJ6 266 aa13.74□□□□□ -0.21
Scn8a-203ENSMUST00000108908 AppP12023 770 aa13.74□□□□□ -0.21
Scn8a-203ENSMUST00000108908 Gm973E9Q295 1059 aa13.73□□□□□ -0.21
Scn8a-203ENSMUST00000108908 Ylpm1Q9R0I7 1386 aaKnown RBP13.72□□□□□ -0.21
Scn8a-203ENSMUST00000108908 G3bp1P97855 465 aaKnown RBP13.72□□□□□ -0.21
Scn8a-203ENSMUST00000108908 R3hcc1Q8BSI6 488 aa13.72□□□□□ -0.21
Scn8a-203ENSMUST00000108908 Tpm3-rs7D3Z2H9 248 aa13.71□□□□□ -0.21
Scn8a-203ENSMUST00000108908 Zscan10Q3URR7 782 aa13.71□□□□□ -0.21
Scn8a-203ENSMUST00000108908 Zfp644E9QA22 1323 aa13.71□□□□□ -0.21
Scn8a-203ENSMUST00000108908 Irx3P81067 507 aa13.7□□□□□ -0.22
Scn8a-203ENSMUST00000108908 Ciz1Q8VEH2 845 aa13.7□□□□□ -0.22
Scn8a-203ENSMUST00000108908 Dnai2A2AC93 623 aa13.69□□□□□ -0.22
Scn8a-203ENSMUST00000108908 Duox2A2AQ99 1517 aa13.69□□□□□ -0.22
Scn8a-203ENSMUST00000108908 Eif2s2Q99L45 331 aaKnown RBP13.69□□□□□ -0.22
Scn8a-203ENSMUST00000108908 Gsto1O09131 240 aa13.68□□□□□ -0.22
Scn8a-203ENSMUST00000108908 Fyb1O35601 819 aa13.68□□□□□ -0.22
Scn8a-203ENSMUST00000108908 AU015836B2RUM3 263 aa13.67□□□□□ -0.22
Scn8a-203ENSMUST00000108908 Pip4k2bQ80XI4 416 aa13.66□□□□□ -0.22
Scn8a-203ENSMUST00000108908 Efcab5A0JP43 1406 aa13.66□□□□□ -0.22
Scn8a-203ENSMUST00000108908 Rpgrip1lQ8CG73 1264 aa13.66□□□□□ -0.22
Scn8a-203ENSMUST00000108908 Ppm1fQ8CGA0 452 aa13.66□□□□□ -0.22
Scn8a-203ENSMUST00000108908 Ankrd36D3Z4K0 1415 aa13.66□□□□□ -0.22
Scn8a-203ENSMUST00000108908 Cgnl1Q6AW69 1298 aa13.65□□□□□ -0.22
Scn8a-203ENSMUST00000108908 Ift140E9PY46 1464 aa13.65□□□□□ -0.22
Scn8a-203ENSMUST00000108908 Gm7298A0A0N4SVU1 1476 aa13.65□□□□□ -0.22
Scn8a-203ENSMUST00000108908 Rab11fip3Q8CHD8 1047 aa13.65□□□□□ -0.22
Scn8a-203ENSMUST00000108908 Tpd52l1O54818 204 aa13.65□□□□□ -0.22
Scn8a-203ENSMUST00000108908 Cald1E9QA15 768 aaKnown RBP13.65□□□□□ -0.22
Scn8a-203ENSMUST00000108908 Chmp7Q8R1T1 451 aa13.65□□□□□ -0.22
Scn8a-203ENSMUST00000108908 Usp16Q99LG0 825 aa13.64□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Ccer1Q9CQL2 403 aa13.64□□□□□ -0.23
Scn8a-203ENSMUST00000108908 SlkO54988 1233 aa13.64□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Pde4cQ3UEI1 686 aa13.64□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Vps8Q0P5W1 1427 aa13.64□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Tomm22Q9CPQ3 142 aa13.64□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Triml2E9PW10 424 aa13.63□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Nectin2P32507 530 aa13.63□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Q9D9H8 365 aa13.63□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Bcl11bQ99PV8 884 aa13.63□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Gpatch11Q3UFS4 262 aa13.63□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Ccdc47Q9D024 483 aaKnown RBP13.63□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Tceal9Q9DD24 104 aa13.63□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Nsd2Q8BVE8 1365 aa13.63□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Chrna2Q91X60 512 aa13.62□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Bcl11aQ9QYE3 773 aa13.62□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Arhgap31A6X8Z5 1425 aa13.62□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Ttll5Q8CHB8 1328 aa13.62□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Map3k5O35099 1380 aa13.62□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Atp6v1dP57746 247 aa13.62□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Vps53Q8CCB4 832 aa13.62□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Ccdc141E9Q8Q6 1531 aa13.62□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Ralbp1Q62172 648 aa13.62□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Arhgef5E9Q7D5 1581 aa13.61□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Nutm1Q8BHP2 1126 aa13.61□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 64.1 ms