RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C SPC19Q03954 165 aa2.91□□□□□ -1.94
ATG27YJL178C DNL4Q08387 944 aaPredicted RBP2.91□□□□□ -1.94
ATG27YJL178C CUE5Q08412 411 aaKnown RBP2.91□□□□□ -1.94
ATG27YJL178C RKM1Q08961 583 aaPredicted RBP2.91□□□□□ -1.94
ATG27YJL178C YDR524C-BQ3E6R4 66 aa2.91□□□□□ -1.94
ATG27YJL178C YMR030W-AQ3E760 96 aa2.91□□□□□ -1.94
ATG27YJL178C COX5AP00424 153 aa2.9□□□□□ -1.95
ATG27YJL178C HSP26P15992 214 aaKnown RBP RIP-Chip data2.9□□□□□ -1.95not detected
ATG27YJL178C MET16P18408 261 aaPredicted RBP2.9□□□□□ -1.95
ATG27YJL178C CTR86P25355 563 aa2.9□□□□□ -1.95
ATG27YJL178C RPC19P28000 142 aaKnown RBP2.9□□□□□ -1.95
ATG27YJL178C CYM1P32898 989 aa2.9□□□□□ -1.95
ATG27YJL178C BUD2P33314 1104 aa2.9□□□□□ -1.95
ATG27YJL178C FZO1P38297 855 aa2.9□□□□□ -1.95
ATG27YJL178C PTH1P38876 190 aaKnown RBP2.9□□□□□ -1.95
ATG27YJL178C ASN2P49090 572 aaKnown RBP2.9□□□□□ -1.95
ATG27YJL178C TAF6P53040 516 aa2.9□□□□□ -1.95
ATG27YJL178C USE1P53146 245 aa2.9□□□□□ -1.95
ATG27YJL178C TIM13P53299 105 aa2.9□□□□□ -1.95
ATG27YJL178C YNR048WP53740 393 aa2.9□□□□□ -1.95
ATG27YJL178C YNL247WP53852 767 aaKnown RBP2.9□□□□□ -1.95
ATG27YJL178C NOP13P53883 403 aaKnown RBP RIP-Chip data2.9□□□□□ -1.95not detected
ATG27YJL178C SLT2Q00772 484 aa2.9□□□□□ -1.95
ATG27YJL178C YET2Q04210 160 aa2.9□□□□□ -1.95
ATG27YJL178C SPG3Q04398 127 aaPredicted RBP2.9□□□□□ -1.95
ATG27YJL178C SPC24Q04477 213 aa2.9□□□□□ -1.95
ATG27YJL178C ERB1Q04660 807 aaKnown RBP2.9□□□□□ -1.95
ATG27YJL178C FAR10Q06001 478 aa2.9□□□□□ -1.95
ATG27YJL178C RRG7Q08774 242 aaPredicted RBP2.9□□□□□ -1.95
ATG27YJL178C GPM3Q12326 303 aa2.9□□□□□ -1.95
ATG27YJL178C HSP42Q12329 375 aa2.9□□□□□ -1.95
ATG27YJL178C RMD5Q12508 421 aa2.9□□□□□ -1.95
ATG27YJL178C YLR422WQ06409 1932 aa2.89□□□□□ -1.95
ATG27YJL178C URA4P20051 364 aa2.89□□□□□ -1.95
ATG27YJL178C VPS3P23643 1011 aa2.89□□□□□ -1.95
ATG27YJL178C LSB5P25369 354 aa2.89□□□□□ -1.95
ATG27YJL178C YCL068CP25593 260 aa2.89□□□□□ -1.95
ATG27YJL178C POT1P27796 417 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
ATG27YJL178C URA10P30402 227 aa2.89□□□□□ -1.95
ATG27YJL178C RAD5P32849 1169 aaPredicted RBP2.89□□□□□ -1.95
ATG27YJL178C TKL2P33315 681 aa2.89□□□□□ -1.95
ATG27YJL178C COY1P34237 679 aa2.89□□□□□ -1.95
ATG27YJL178C UIP5P36137 443 aa2.89□□□□□ -1.95
ATG27YJL178C SWD3P38123 315 aa2.89□□□□□ -1.95
ATG27YJL178C URA8P38627 578 aaPredicted RBP2.89□□□□□ -1.95
ATG27YJL178C YHI9P38765 294 aa2.89□□□□□ -1.95
ATG27YJL178C RRP4P38792 359 aaKnown RBP2.89□□□□□ -1.95
ATG27YJL178C MTC6P38849 526 aa2.89□□□□□ -1.95
ATG27YJL178C FHL1P39521 936 aa2.89□□□□□ -1.95
ATG27YJL178C YEL028WP39989 153 aa2.89□□□□□ -1.95
ATG27YJL178C EDC3P39998 551 aaKnown RBP2.89□□□□□ -1.95
ATG27YJL178C ALD5P40047 520 aaKnown RBP2.89□□□□□ -1.95
ATG27YJL178C PRM5P40476 318 aa2.89□□□□□ -1.95
ATG27YJL178C TRF5P48561 642 aaKnown RBP2.89□□□□□ -1.95
ATG27YJL178C TRM112P53738 135 aaPredicted RBP2.89□□□□□ -1.95
ATG27YJL178C HER2Q03557 464 aa2.89□□□□□ -1.95
ATG27YJL178C BET5Q03630 159 aa2.89□□□□□ -1.95
ATG27YJL178C FMN1Q03778 218 aa2.89□□□□□ -1.95
ATG27YJL178C YLR345WQ06137 509 aa2.89□□□□□ -1.95
ATG27YJL178C REX4Q08237 289 aa2.89□□□□□ -1.95
ATG27YJL178C SGT1Q08446 395 aa2.89□□□□□ -1.95
ATG27YJL178C SNX3Q08826 162 aaKnown RBP2.89□□□□□ -1.95
ATG27YJL178C GPM2Q12008 311 aa2.89□□□□□ -1.95
ATG27YJL178C LDB17Q12342 491 aa2.89□□□□□ -1.95
ATG27YJL178C HRT3Q12347 344 aa2.89□□□□□ -1.95
ATG27YJL178C OCA6Q12454 224 aa2.89□□□□□ -1.95
ATG27YJL178C NOT5Q12514 560 aaPredicted RBP2.89□□□□□ -1.95
ATG27YJL178C EFG1Q3E705 233 aaKnown RBP2.89□□□□□ -1.95
ATG27YJL178C RPL24AP04449 155 aaKnown RBP2.88□□□□□ -1.95
ATG27YJL178C BRF1P29056 596 aa2.88□□□□□ -1.95
ATG27YJL178C SSE1P32589 693 aaKnown RBP2.88□□□□□ -1.95
ATG27YJL178C SPR1P32603 445 aa2.88□□□□□ -1.95
ATG27YJL178C TFB1P32776 642 aa2.88□□□□□ -1.95
ATG27YJL178C PIM1P36775 1133 aa2.88□□□□□ -1.95
ATG27YJL178C ATG12P38316 186 aa2.88□□□□□ -1.95
ATG27YJL178C SLX1P38324 304 aa2.88□□□□□ -1.95
ATG27YJL178C DED81P38707 554 aaKnown RBP2.88□□□□□ -1.95
ATG27YJL178C TRM5P38793 499 aa2.88□□□□□ -1.95
ATG27YJL178C AIF1P52923 378 aa2.88□□□□□ -1.95
ATG27YJL178C PEX31P53203 462 aa2.88□□□□□ -1.95
ATG27YJL178C OCA2P53949 197 aa2.88□□□□□ -1.95
ATG27YJL178C GIP3Q03016 1276 aa2.88□□□□□ -1.95
ATG27YJL178C YMR181CQ03231 154 aa2.88□□□□□ -1.95
ATG27YJL178C ACL4Q03771 387 aa2.88□□□□□ -1.95
ATG27YJL178C CSN9Q03981 162 aa2.88□□□□□ -1.95
ATG27YJL178C AIM32Q04689 311 aa2.88□□□□□ -1.95
ATG27YJL178C CDC123Q05791 360 aa2.88□□□□□ -1.95
ATG27YJL178C MHR1Q06630 226 aa2.88□□□□□ -1.95
ATG27YJL178C SWC7Q06707 132 aa2.88□□□□□ -1.95
ATG27YJL178C YPR202WQ08993 238 aa2.88□□□□□ -1.95
ATG27YJL178C YPL247CQ12523 523 aa2.88□□□□□ -1.95
ATG27YJL178C RGS2Q99188 309 aa2.88□□□□□ -1.95
ATG27YJL178C STE2D6VTK4 431 aa2.87□□□□□ -1.95
ATG27YJL178C HAP2P06774 265 aa2.87□□□□□ -1.95
ATG27YJL178C RPS8AP0CX39 200 aaKnown RBP2.87□□□□□ -1.95
ATG27YJL178C RPS8BP0CX40 200 aaKnown RBP2.87□□□□□ -1.95
ATG27YJL178C GPA2P10823 449 aa2.87□□□□□ -1.95
ATG27YJL178C PHA2P32452 334 aa2.87□□□□□ -1.95
ATG27YJL178C SMI1P32566 505 aa2.87□□□□□ -1.95
ATG27YJL178C PTC1P35182 281 aa2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms