RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP7	YIL156W	HEM1	P09950	548 aa	Predicted RBP	4.58	□□□□□ -1.68
UBP7	YIL156W	AQY1	P0CD91	305 aa		4.58	□□□□□ -1.68
UBP7	YIL156W	MATALPHA2	P0CY08	210 aa		4.58	□□□□□ -1.68
UBP7	YIL156W	HMLALPHA2	P0CY09	210 aa		4.58	□□□□□ -1.68
UBP7	YIL156W	SAD1	P43589	448 aa		4.58	□□□□□ -1.68
UBP7	YIL156W	YJL043W	P47053	257 aa		4.58	□□□□□ -1.68
UBP7	YIL156W	LGE1	Q02796	332 aa	Known RBP	4.58	□□□□□ -1.68
UBP7	YIL156W	DIC1	Q06143	298 aa		4.58	□□□□□ -1.68
UBP7	YIL156W	PBP4	Q07362	185 aa	Known RBP	4.58	□□□□□ -1.68
UBP7	YIL156W	LOT6	Q07923	191 aa		4.58	□□□□□ -1.68
UBP7	YIL156W	YOL073C	Q08232	322 aa		4.58	□□□□□ -1.68
UBP7	YIL156W	SKI7	Q08491	747 aa	Predicted RBP	4.58	□□□□□ -1.68
UBP7	YIL156W	LIP5	P32875	414 aa		4.58	□□□□□ -1.68
UBP7	YIL156W	PRP18	P33411	251 aa	Predicted RBP	4.58	□□□□□ -1.68
UBP7	YIL156W	ARN1	P38731	627 aa		4.58	□□□□□ -1.68
UBP7	YIL156W	YAP3	P38749	330 aa		4.58	□□□□□ -1.68
UBP7	YIL156W	MKC7	P53379	596 aa		4.58	□□□□□ -1.68
UBP7	YIL156W	YMR226C	Q05016	267 aa	Known RBP	4.58	□□□□□ -1.68
UBP7	YIL156W	YIL177C	P40434	1758 aa		4.58	□□□□□ -1.68
UBP7	YIL156W	YJL225C	P40889	1758 aa		4.58	□□□□□ -1.68
UBP7	YIL156W	THP2	O13539	261 aa	Known RBP	4.57	□□□□□ -1.68
UBP7	YIL156W	FAR1	P21268	830 aa		4.57	□□□□□ -1.68
UBP7	YIL156W	SAT4	P25333	603 aa	Known RBP	4.57	□□□□□ -1.68
UBP7	YIL156W	SKT5	P34226	696 aa		4.57	□□□□□ -1.68
UBP7	YIL156W	FAA2	P39518	744 aa		4.57	□□□□□ -1.68
UBP7	YIL156W	YIP1	P53039	248 aa		4.57	□□□□□ -1.68
UBP7	YIL156W	OKP1	P53298	406 aa		4.57	□□□□□ -1.68
UBP7	YIL156W	PXR1	P53335	271 aa	Predicted RBP	4.57	□□□□□ -1.68
UBP7	YIL156W	ALG11	P53954	548 aa	Known RBP	4.57	□□□□□ -1.68
UBP7	YIL156W	NUP116	Q02630	1113 aa		4.57	□□□□□ -1.68
UBP7	YIL156W	SLD5	Q03406	294 aa		4.57	□□□□□ -1.68
UBP7	YIL156W	GIS1	Q03833	894 aa		4.57	□□□□□ -1.68
UBP7	YIL156W	ARP10	Q04549	284 aa		4.57	□□□□□ -1.68
UBP7	YIL156W	TMN2	Q04562	672 aa		4.57	□□□□□ -1.68
UBP7	YIL156W	SPO77	Q06134	477 aa		4.57	□□□□□ -1.68
UBP7	YIL156W	TIP41	Q12199	356 aa		4.57	□□□□□ -1.68
UBP7	YIL156W	ERP3	Q12403	225 aa		4.57	□□□□□ -1.68
UBP7	YIL156W	SPO12	P17123	173 aa		4.57	□□□□□ -1.68
UBP7	YIL156W	ARF2	P19146	181 aa	Known RBP	4.57	□□□□□ -1.68
UBP7	YIL156W	CBT1	P36038	271 aa	Predicted RBP	4.57	□□□□□ -1.68
UBP7	YIL156W	RTC3	P38804	111 aa	Predicted RBP	4.57	□□□□□ -1.68
UBP7	YIL156W	LYS1	P38998	373 aa	RIP-Chip data	4.57	□□□□□ -1.68	not detected
UBP7	YIL156W	YRA1	Q12159	226 aa	Known RBP	4.57	□□□□□ -1.68
UBP7	YIL156W	ACP1	P32463	125 aa		4.57	□□□□□ -1.68
UBP7	YIL156W	RIM2	P38127	377 aa		4.57	□□□□□ -1.68
UBP7	YIL156W	ECL1	P48235	211 aa		4.57	□□□□□ -1.68
UBP7	YIL156W	RRN9	P53437	365 aa		4.57	□□□□□ -1.68
UBP7	YIL156W	SWF1	Q04629	336 aa		4.57	□□□□□ -1.68
UBP7	YIL156W	DCR2	Q05924	578 aa		4.57	□□□□□ -1.68
UBP7	YIL156W	SRO7	Q12038	1033 aa		4.57	□□□□□ -1.68
UBP7	YIL156W	DAP1	Q12091	152 aa		4.57	□□□□□ -1.68
UBP7	YIL156W	MRP1	P10662	321 aa	Known RBP	4.56	□□□□□ -1.68
UBP7	YIL156W	ERG9	P29704	444 aa		4.56	□□□□□ -1.68
UBP7	YIL156W	IST2	P38250	946 aa		4.56	□□□□□ -1.68
UBP7	YIL156W	CCT4	P39078	528 aa	Known RBP	4.56	□□□□□ -1.68
UBP7	YIL156W	SED5	Q01590	340 aa		4.56	□□□□□ -1.68
UBP7	YIL156W	YPL080C	Q02826	108 aa		4.56	□□□□□ -1.68
UBP7	YIL156W	HER2	Q03557	464 aa		4.56	□□□□□ -1.68
UBP7	YIL156W	SRL2	Q12020	392 aa		4.56	□□□□□ -1.68
UBP7	YIL156W	VMA6	P32366	345 aa	Known RBP	4.56	□□□□□ -1.68
UBP7	YIL156W	SWD2	P36104	329 aa	Predicted RBP	4.56	□□□□□ -1.68
UBP7	YIL156W	YCR041W	P37265	110 aa		4.56	□□□□□ -1.68
UBP7	YIL156W	MIC12	P38341	106 aa		4.56	□□□□□ -1.68
UBP7	YIL156W	FHL1	P39521	936 aa		4.56	□□□□□ -1.68
UBP7	YIL156W	DSN1	P40568	576 aa		4.56	□□□□□ -1.68
UBP7	YIL156W	NUP100	Q02629	959 aa		4.56	□□□□□ -1.68
UBP7	YIL156W	OST6	Q03723	332 aa		4.56	□□□□□ -1.68
UBP7	YIL156W	CAC2	Q04199	468 aa		4.56	□□□□□ -1.68
UBP7	YIL156W	SET6	Q12529	373 aa		4.56	□□□□□ -1.68
UBP7	YIL156W	CBF1	P17106	351 aa		4.55	□□□□□ -1.68
UBP7	YIL156W	STE18	P18852	110 aa		4.55	□□□□□ -1.68
UBP7	YIL156W	YCR007C	P25354	239 aa		4.55	□□□□□ -1.68
UBP7	YIL156W	LST7	P53237	242 aa		4.55	□□□□□ -1.68
UBP7	YIL156W	FRE4	P53746	719 aa		4.55	□□□□□ -1.68
UBP7	YIL156W	KRE28	Q04431	385 aa		4.55	□□□□□ -1.68
UBP7	YIL156W	HPR1	P17629	752 aa	Known RBP	4.55	□□□□□ -1.68
UBP7	YIL156W	MRPL8	P22353	238 aa		4.55	□□□□□ -1.68
UBP7	YIL156W	PEX3	P28795	441 aa		4.55	□□□□□ -1.68
UBP7	YIL156W	EGD2	P38879	174 aa	Known RBP	4.55	□□□□□ -1.68
UBP7	YIL156W	SIM1	P40472	476 aa		4.55	□□□□□ -1.68
UBP7	YIL156W	YMR206W	Q03695	313 aa		4.55	□□□□□ -1.68
UBP7	YIL156W	APC9	Q12107	265 aa		4.55	□□□□□ -1.68
UBP7	YIL156W	YOP1	Q12402	180 aa		4.55	□□□□□ -1.68
UBP7	YIL156W	NCB2	Q92317	146 aa		4.55	□□□□□ -1.68
UBP7	YIL156W	LSB5	P25369	354 aa		4.55	□□□□□ -1.68
UBP7	YIL156W	ACB1	P31787	87 aa		4.55	□□□□□ -1.68
UBP7	YIL156W	GDH2	P33327	1092 aa	Known RBP	4.55	□□□□□ -1.68
UBP7	YIL156W	DTR1	P38125	572 aa		4.55	□□□□□ -1.68
UBP7	YIL156W	ATP6	P00854	259 aa		4.54	□□□□□ -1.68
UBP7	YIL156W	RPL27A	P0C2H6	136 aa	Known RBP	4.54	□□□□□ -1.68
UBP7	YIL156W	RPL27B	P0C2H7	136 aa	Known RBP	4.54	□□□□□ -1.68
UBP7	YIL156W	REV1	P12689	985 aa		4.54	□□□□□ -1.68
UBP7	YIL156W	PTP1	P25044	335 aa		4.54	□□□□□ -1.68
UBP7	YIL156W	ADE1	P27616	306 aa		4.54	□□□□□ -1.68
UBP7	YIL156W	SMF2	P38778	549 aa		4.54	□□□□□ -1.68
UBP7	YIL156W	AZR1	P50080	613 aa		4.54	□□□□□ -1.68
UBP7	YIL156W	GLO2	Q05584	274 aa		4.54	□□□□□ -1.68
UBP7	YIL156W	YOR387C	Q08910	206 aa		4.54	□□□□□ -1.68
UBP7	YIL156W	RDL1	Q12305	139 aa	Known RBP	4.54	□□□□□ -1.68
UBP7	YIL156W	RPO26	P20435	155 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms