RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C DNL4Q08387 944 aaPredicted RBP4.08□□□□□ -1.76
PEX12YMR026C PFK27Q12471 397 aaPredicted RBP4.08□□□□□ -1.76
PEX12YMR026C TAL1P15019 335 aaKnown RBP4.07□□□□□ -1.76
PEX12YMR026C PFS1P38872 237 aa4.07□□□□□ -1.76
PEX12YMR026C YDR089WP38966 869 aa4.07□□□□□ -1.76
PEX12YMR026C SEC27P41811 889 aaKnown RBP4.07□□□□□ -1.76
PEX12YMR026C PSK1P31374 1356 aa4.06□□□□□ -1.76
PEX12YMR026C OM45P16547 393 aa4.06□□□□□ -1.76
PEX12YMR026C MRPL40P36534 297 aa4.06□□□□□ -1.76
PEX12YMR026C GPI18P38211 433 aa4.06□□□□□ -1.76
PEX12YMR026C ALD5P40047 520 aaKnown RBP4.06□□□□□ -1.76
PEX12YMR026C ARP5P53946 755 aa4.06□□□□□ -1.76
PEX12YMR026C REX2P54964 269 aaKnown RBP4.06□□□□□ -1.76
PEX12YMR026C YFH1Q07540 174 aa4.06□□□□□ -1.76
PEX12YMR026C STE3P06783 470 aa4.05□□□□□ -1.76
PEX12YMR026C GAL7P08431 366 aa4.05□□□□□ -1.76
PEX12YMR026C RPS18AP0CX55 146 aaKnown RBP4.05□□□□□ -1.76
PEX12YMR026C RPS18BP0CX56 146 aaPredicted RBP4.05□□□□□ -1.76
PEX12YMR026C PUT4P15380 627 aa4.05□□□□□ -1.76
PEX12YMR026C UBA1P22515 1024 aaKnown RBP4.05□□□□□ -1.76
PEX12YMR026C DEP1P31385 405 aa4.05□□□□□ -1.76
PEX12YMR026C LSM12P38828 187 aaKnown RBP4.05□□□□□ -1.76
PEX12YMR026C IGD1P43598 195 aa4.05□□□□□ -1.76
PEX12YMR026C KEG1P43614 200 aa4.05□□□□□ -1.76
PEX12YMR026C PGU1P47180 361 aa4.05□□□□□ -1.76
PEX12YMR026C PRM1P53835 661 aa4.05□□□□□ -1.76
PEX12YMR026C TIM11P81449 96 aaPredicted RBP4.05□□□□□ -1.76
PEX12YMR026C YHC1Q05900 231 aaKnown RBP4.05□□□□□ -1.76
PEX12YMR026C NBL1Q3E7Y6 73 aa4.05□□□□□ -1.76
PEX12YMR026C SCH9P11792 824 aaKnown RBP4.04□□□□□ -1.76
PEX12YMR026C DBP3P20447 523 aaKnown RBP4.04□□□□□ -1.76
PEX12YMR026C GIT1P25346 518 aa4.04□□□□□ -1.76
PEX12YMR026C FAA1P30624 700 aaKnown RBP4.04□□□□□ -1.76
PEX12YMR026C VPS45P38932 577 aa4.04□□□□□ -1.76
PEX12YMR026C CIN2P46670 268 aa4.04□□□□□ -1.76
PEX12YMR026C TRF5P48561 642 aaKnown RBP4.04□□□□□ -1.76
PEX12YMR026C YPS5P53057 165 aa4.04□□□□□ -1.76
PEX12YMR026C MKC7P53379 596 aa4.04□□□□□ -1.76
PEX12YMR026C GAT3Q07928 141 aa4.04□□□□□ -1.76
PEX12YMR026C MCT1Q12283 360 aa4.04□□□□□ -1.76
PEX12YMR026C YDL012CQ12489 107 aa4.04□□□□□ -1.76
PEX12YMR026C MRPL8P22353 238 aa4.03□□□□□ -1.76
PEX12YMR026C CHA1P25379 360 aaKnown RBP4.03□□□□□ -1.76
PEX12YMR026C RPA34P47006 233 aaPredicted RBP4.03□□□□□ -1.76
PEX12YMR026C VHS1Q03785 461 aa4.03□□□□□ -1.76
PEX12YMR026C STE7P06784 515 aa4.02□□□□□ -1.77
PEX12YMR026C CBP6P07253 162 aaPredicted RBP4.02□□□□□ -1.77
PEX12YMR026C SEO1P39709 593 aa4.02□□□□□ -1.77
PEX12YMR026C YFR018CP43599 363 aa4.02□□□□□ -1.77
PEX12YMR026C GRX3Q03835 250 aa4.02□□□□□ -1.77
PEX12YMR026C MSC3Q05812 728 aa4.02□□□□□ -1.77
PEX12YMR026C SGT2Q12118 346 aaKnown RBP4.02□□□□□ -1.77
PEX12YMR026C FOL3Q12676 427 aaPredicted RBP4.02□□□□□ -1.77
PEX12YMR026C IME2P32581 645 aa4.01□□□□□ -1.77
PEX12YMR026C PTK1P36002 662 aaPredicted RBP4.01□□□□□ -1.77
PEX12YMR026C YBL028CP38202 106 aa4.01□□□□□ -1.77
PEX12YMR026C EFM3P47163 339 aa4.01□□□□□ -1.77
PEX12YMR026C YGR018CP53211 109 aa4.01□□□□□ -1.77
PEX12YMR026C UTP6Q02354 440 aaKnown RBP4.01□□□□□ -1.77
PEX12YMR026C YMR010WQ03687 405 aa4.01□□□□□ -1.77
PEX12YMR026C HMS1Q12398 434 aa4.01□□□□□ -1.77
PEX12YMR026C YOR338WQ99326 363 aa4.01□□□□□ -1.77
PEX12YMR026C ADH1P00330 348 aaKnown RBP4□□□□□ -1.77
PEX12YMR026C CBP2P03874 630 aaPredicted RBP4□□□□□ -1.77
PEX12YMR026C PSO2P30620 661 aa4□□□□□ -1.77
PEX12YMR026C CTK3P46963 296 aaPredicted RBP4□□□□□ -1.77
PEX12YMR026C YGL262WP53054 175 aa4□□□□□ -1.77
PEX12YMR026C MPS2P53159 387 aa4□□□□□ -1.77
PEX12YMR026C RET3P53600 189 aa4□□□□□ -1.77
PEX12YMR026C TPS1Q00764 495 aaKnown RBP4□□□□□ -1.77
PEX12YMR026C ENT5Q03769 411 aaKnown RBP4□□□□□ -1.77
PEX12YMR026C RRB1Q04225 511 aaKnown RBP4□□□□□ -1.77
PEX12YMR026C MRPL23Q12487 163 aaPredicted RBP4□□□□□ -1.77
PEX12YMR026C VPS63O13549 108 aa3.99□□□□□ -1.77
PEX12YMR026C GCD2P12754 651 aaPredicted RBP3.99□□□□□ -1.77
PEX12YMR026C CMK2P22517 447 aa3.99□□□□□ -1.77
PEX12YMR026C RDS1P25611 832 aa3.99□□□□□ -1.77
PEX12YMR026C MRPS9P38120 278 aa3.99□□□□□ -1.77
PEX12YMR026C SSO2P39926 295 aa3.99□□□□□ -1.77
PEX12YMR026C LYS12P40495 371 aaKnown RBP3.99□□□□□ -1.77
PEX12YMR026C VHT1P53241 593 aa3.99□□□□□ -1.77
PEX12YMR026C KTR6P54070 446 aa3.99□□□□□ -1.77
PEX12YMR026C PRP38Q00723 242 aaPredicted RBP3.99□□□□□ -1.77
PEX12YMR026C EGD1Q02642 157 aaKnown RBP3.99□□□□□ -1.77
PEX12YMR026C RRN5Q02983 363 aa3.99□□□□□ -1.77
PEX12YMR026C TLG1Q03322 224 aa3.99□□□□□ -1.77
PEX12YMR026C VPS20Q04272 221 aa3.99□□□□□ -1.77
PEX12YMR026C RNH1Q04740 348 aa3.99□□□□□ -1.77
PEX12YMR026C YLH47Q06493 454 aa3.99□□□□□ -1.77
PEX12YMR026C YLR413WQ06689 675 aa3.99□□□□□ -1.77
PEX12YMR026C SHS1Q07657 551 aa3.99□□□□□ -1.77
PEX12YMR026C PEX27Q08580 376 aa3.99□□□□□ -1.77
PEX12YMR026C SFM1Q12314 213 aa3.99□□□□□ -1.77
PEX12YMR026C SFG1Q12507 346 aa3.99□□□□□ -1.77
PEX12YMR026C YBL111CQ3E7Y5 667 aa3.99□□□□□ -1.77
PEX12YMR026C YIL002W-AQ3E7Z5 69 aa3.99□□□□□ -1.77
PEX12YMR026C HEM4P06174 275 aa3.98□□□□□ -1.77
PEX12YMR026C MSK1P32048 576 aa3.98□□□□□ -1.77
PEX12YMR026C MRPL27P36526 146 aaPredicted RBP3.98□□□□□ -1.77
PEX12YMR026C HEM14P40012 539 aa3.98□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms