RNA–Protein interactions for RNA: YLR048W

RPS0B, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS0B, Length 759 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS0B	YLR048W	BIO4	P53630	237 aa		4.3	□□□□□ -1.72
RPS0B	YLR048W	STP1	Q00947	519 aa		4.3	□□□□□ -1.72
RPS0B	YLR048W	YMR181C	Q03231	154 aa		4.3	□□□□□ -1.72
RPS0B	YLR048W	COX20	Q04935	205 aa		4.3	□□□□□ -1.72
RPS0B	YLR048W	BCH1	Q05029	724 aa		4.3	□□□□□ -1.72
RPS0B	YLR048W	RTT103	Q05543	409 aa		4.3	□□□□□ -1.72
RPS0B	YLR048W	GAT3	Q07928	141 aa		4.3	□□□□□ -1.72
RPS0B	YLR048W	CSR2	Q12734	1121 aa		4.3	□□□□□ -1.72
RPS0B	YLR048W	SSK22	P25390	1331 aa	Predicted RBP	4.29	□□□□□ -1.72
RPS0B	YLR048W	QCR6	P00127	147 aa		4.29	□□□□□ -1.72
RPS0B	YLR048W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.29	□□□□□ -1.72	not detected
RPS0B	YLR048W	SLY1	P22213	666 aa		4.29	□□□□□ -1.72
RPS0B	YLR048W	RBK1	P25332	333 aa		4.29	□□□□□ -1.72
RPS0B	YLR048W	DCC1	P25559	380 aa		4.29	□□□□□ -1.72
RPS0B	YLR048W	MKK1	P32490	508 aa		4.29	□□□□□ -1.72
RPS0B	YLR048W	TMT1	P32643	299 aa		4.29	□□□□□ -1.72
RPS0B	YLR048W	GCG1	P32656	232 aa	Known RBP	4.29	□□□□□ -1.72
RPS0B	YLR048W	BMH2	P34730	273 aa	Known RBP	4.29	□□□□□ -1.72
RPS0B	YLR048W	COS9	P36034	407 aa		4.29	□□□□□ -1.72
RPS0B	YLR048W	MMS21	P38632	267 aa		4.29	□□□□□ -1.72
RPS0B	YLR048W	PRM9	P39551	298 aa		4.29	□□□□□ -1.72
RPS0B	YLR048W	AIM10	P39965	576 aa	Known RBP	4.29	□□□□□ -1.72
RPS0B	YLR048W	RTR1	P40084	226 aa	Predicted RBP	4.29	□□□□□ -1.72
RPS0B	YLR048W	YAR1	P46683	200 aa		4.29	□□□□□ -1.72
RPS0B	YLR048W	IKS1	P47042	667 aa		4.29	□□□□□ -1.72
RPS0B	YLR048W	CGR1	P53188	120 aa		4.29	□□□□□ -1.72
RPS0B	YLR048W	PIR3	Q03180	325 aa		4.29	□□□□□ -1.72
RPS0B	YLR048W	GMC2	Q06201	188 aa		4.29	□□□□□ -1.72
RPS0B	YLR048W	BSC6	Q08280	497 aa		4.29	□□□□□ -1.72
RPS0B	YLR048W	AHC1	Q12433	566 aa		4.29	□□□□□ -1.72
RPS0B	YLR048W	DET1	Q99288	334 aa	Known RBP	4.29	□□□□□ -1.72
RPS0B	YLR048W	COX2	P00410	251 aa		4.28	□□□□□ -1.72
RPS0B	YLR048W	PRB1	P09232	635 aa		4.28	□□□□□ -1.72
RPS0B	YLR048W	YSR3	P23501	404 aa		4.28	□□□□□ -1.72
RPS0B	YLR048W	YCR016W	P25617	290 aa	Known RBP	4.28	□□□□□ -1.72
RPS0B	YLR048W	CWP1	P28319	239 aa		4.28	□□□□□ -1.72
RPS0B	YLR048W	ERG9	P29704	444 aa		4.28	□□□□□ -1.72
RPS0B	YLR048W	PTR2	P32901	601 aa		4.28	□□□□□ -1.72
RPS0B	YLR048W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.28	□□□□□ -1.72	not detected
RPS0B	YLR048W	ALG8	P40351	577 aa		4.28	□□□□□ -1.72
RPS0B	YLR048W	SHQ1	P40486	507 aa	Predicted RBP	4.28	□□□□□ -1.72
RPS0B	YLR048W	MSS2	P40990	351 aa		4.28	□□□□□ -1.72
RPS0B	YLR048W	AIM24	P47127	394 aa		4.28	□□□□□ -1.72
RPS0B	YLR048W	SEH1	P53011	349 aa	Known RBP	4.28	□□□□□ -1.72
RPS0B	YLR048W	OKP1	P53298	406 aa		4.28	□□□□□ -1.72
RPS0B	YLR048W	TRM112	P53738	135 aa	Predicted RBP	4.28	□□□□□ -1.72
RPS0B	YLR048W	RPM2	Q02773	1202 aa		4.28	□□□□□ -1.72
RPS0B	YLR048W	CSM3	Q04659	317 aa		4.28	□□□□□ -1.72
RPS0B	YLR048W	YPR172W	Q06608	200 aa		4.28	□□□□□ -1.72
RPS0B	YLR048W	BER1	Q06688	274 aa	Known RBP	4.28	□□□□□ -1.72
RPS0B	YLR048W	YPQ1	Q12010	308 aa		4.28	□□□□□ -1.72
RPS0B	YLR048W	RVS161	P25343	265 aa	Known RBP	4.27	□□□□□ -1.73
RPS0B	YLR048W	POP5	P28005	173 aa		4.27	□□□□□ -1.73
RPS0B	YLR048W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
RPS0B	YLR048W	SWD2	P36104	329 aa	Predicted RBP	4.27	□□□□□ -1.73
RPS0B	YLR048W	RIB5	P38145	238 aa		4.27	□□□□□ -1.73
RPS0B	YLR048W	ALD5	P40047	520 aa	Known RBP	4.27	□□□□□ -1.73
RPS0B	YLR048W	DIM1	P41819	318 aa	Known RBP	4.27	□□□□□ -1.73
RPS0B	YLR048W	YCH1	P42937	148 aa		4.27	□□□□□ -1.73
RPS0B	YLR048W	AGP3	P43548	558 aa		4.27	□□□□□ -1.73
RPS0B	YLR048W	MDV1	P47025	714 aa		4.27	□□□□□ -1.73
RPS0B	YLR048W	COS1	P53822	381 aa		4.27	□□□□□ -1.73
RPS0B	YLR048W	PGA2	P53903	129 aa		4.27	□□□□□ -1.73
RPS0B	YLR048W	PBP4	Q07362	185 aa	Known RBP	4.27	□□□□□ -1.73
RPS0B	YLR048W	ALE1	Q08548	619 aa		4.27	□□□□□ -1.73
RPS0B	YLR048W	SNX3	Q08826	162 aa	Known RBP	4.27	□□□□□ -1.73
RPS0B	YLR048W	YLR108C	Q12259	485 aa		4.27	□□□□□ -1.73
RPS0B	YLR048W	SET6	Q12529	373 aa		4.27	□□□□□ -1.73
RPS0B	YLR048W	CFT1	Q06632	1357 aa	Known RBP	4.27	□□□□□ -1.73
RPS0B	YLR048W	RAD3	P06839	778 aa		4.26	□□□□□ -1.73
RPS0B	YLR048W	ARG80	P07249	177 aa		4.26	□□□□□ -1.73
RPS0B	YLR048W	MER1	P16523	270 aa		4.26	□□□□□ -1.73
RPS0B	YLR048W	MRPL25	P23369	157 aa		4.26	□□□□□ -1.73
RPS0B	YLR048W	YCP4	P25349	247 aa	Known RBP	4.26	□□□□□ -1.73
RPS0B	YLR048W	PRR1	P28708	518 aa		4.26	□□□□□ -1.73
RPS0B	YLR048W	ITR2	P30606	609 aa		4.26	□□□□□ -1.73
RPS0B	YLR048W	NDC1	P32500	655 aa		4.26	□□□□□ -1.73
RPS0B	YLR048W	TRS65	P32893	560 aa		4.26	□□□□□ -1.73
RPS0B	YLR048W	CYM1	P32898	989 aa		4.26	□□□□□ -1.73
RPS0B	YLR048W	YKL071W	P36086	256 aa		4.26	□□□□□ -1.73
RPS0B	YLR048W	YIR016W	P40572	265 aa		4.26	□□□□□ -1.73
RPS0B	YLR048W	PSA1	P41940	361 aa	Known RBP	4.26	□□□□□ -1.73
RPS0B	YLR048W	TRF5	P48561	642 aa	Known RBP	4.26	□□□□□ -1.73
RPS0B	YLR048W	CAF40	P53829	373 aa		4.26	□□□□□ -1.73
RPS0B	YLR048W	GIM3	P53900	129 aa		4.26	□□□□□ -1.73
RPS0B	YLR048W	NDE2	Q07500	545 aa		4.26	□□□□□ -1.73
RPS0B	YLR048W	ERP3	Q12403	225 aa		4.26	□□□□□ -1.73
RPS0B	YLR048W	ATG31	Q12421	196 aa		4.26	□□□□□ -1.73
RPS0B	YLR048W	MEX67	Q99257	599 aa	Known RBP	4.26	□□□□□ -1.73
RPS0B	YLR048W	ADH2	P00331	348 aa	Known RBP	4.25	□□□□□ -1.73
RPS0B	YLR048W	YFL068W	P0CX99	160 aa		4.25	□□□□□ -1.73
RPS0B	YLR048W	YLL066W-A	P0CY00	160 aa		4.25	□□□□□ -1.73
RPS0B	YLR048W	YLL067W-A	P0CY01	160 aa		4.25	□□□□□ -1.73
RPS0B	YLR048W	MTF1	P14908	341 aa	Known RBP	4.25	□□□□□ -1.73
RPS0B	YLR048W	PUT3	P25502	979 aa	Predicted RBP	4.25	□□□□□ -1.73
RPS0B	YLR048W	KRE6	P32486	720 aa		4.25	□□□□□ -1.73
RPS0B	YLR048W	YPT35	P38815	214 aa	Known RBP	4.25	□□□□□ -1.73
RPS0B	YLR048W	JLP2	P40206	208 aa		4.25	□□□□□ -1.73
RPS0B	YLR048W	OTU1	P43558	301 aa		4.25	□□□□□ -1.73
RPS0B	YLR048W	YJR030C	P47101	745 aa		4.25	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms