RNA–Protein interactions for RNA: YJL010C

NOP9, Transcript of Essential subunit of U3-containing 90S preribosome, yeast

Gene NOP9, Length 2,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOP9	YJL010C	YDL109C	Q12103	647 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	ATP16	Q12165	160 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	YPS3	Q12303	508 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	SFM1	Q12314	213 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	GLE1	Q12315	538 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	CHA1	P25379	360 aa	Known RBP	0.81	□□□□□ -2.28
NOP9	YJL010C	LDS1	P31379	325 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	COS9	P36034	407 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	DTR1	P38125	572 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	SMP1	P38128	452 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	YHR177W	P38867	453 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	JEM1	P40358	645 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	SNL1	P40548	159 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	KEG1	P43614	200 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	CTK3	P46963	296 aa	Predicted RBP	0.81	□□□□□ -2.28
NOP9	YJL010C	SEH1	P53011	349 aa	Known RBP	0.81	□□□□□ -2.28
NOP9	YJL010C	PIN3	Q06449	215 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	IPK1	Q06667	281 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	SRN2	Q99176	213 aa		0.81	□□□□□ -2.28
NOP9	YJL010C	TPI1	P00942	248 aa	Known RBP	0.8	□□□□□ -2.28
NOP9	YJL010C	HEM4	P06174	275 aa		0.8	□□□□□ -2.28
NOP9	YJL010C	RPS14A	P06367	137 aa	Known RBP	0.8	□□□□□ -2.28
NOP9	YJL010C	UNG1	P12887	359 aa		0.8	□□□□□ -2.28
NOP9	YJL010C	MRPL8	P22353	238 aa		0.8	□□□□□ -2.28
NOP9	YJL010C	ZIP1	P31111	875 aa		0.8	□□□□□ -2.28
NOP9	YJL010C	YHR182W	P38870	785 aa		0.8	□□□□□ -2.28
NOP9	YJL010C	RPS14B	P39516	138 aa	Known RBP	0.8	□□□□□ -2.28
NOP9	YJL010C	FHL1	P39521	936 aa		0.8	□□□□□ -2.28
NOP9	YJL010C	RRT13	P40042	185 aa		0.8	□□□□□ -2.28
NOP9	YJL010C	SEC28	P40509	296 aa	Known RBP	0.8	□□□□□ -2.28
NOP9	YJL010C	MPS2	P53159	387 aa		0.8	□□□□□ -2.28
NOP9	YJL010C	CDH1	P53197	566 aa		0.8	□□□□□ -2.28
NOP9	YJL010C	EOS1	P53938	366 aa		0.8	□□□□□ -2.28
NOP9	YJL010C	MRX11	Q03079	207 aa		0.8	□□□□□ -2.28
NOP9	YJL010C	GAS2	Q06135	555 aa		0.8	□□□□□ -2.28
NOP9	YJL010C	SHS1	Q07657	551 aa		0.8	□□□□□ -2.28
NOP9	YJL010C	SLF1	Q12034	447 aa	Known RBP	0.8	□□□□□ -2.28
NOP9	YJL010C	LDB17	Q12342	491 aa		0.8	□□□□□ -2.28
NOP9	YJL010C	FLO11	P08640	1367 aa		0.79	□□□□□ -2.28
NOP9	YJL010C	RPL23A	P0CX41	137 aa	Known RBP	0.79	□□□□□ -2.28
NOP9	YJL010C	RPL23B	P0CX42	137 aa	Known RBP	0.79	□□□□□ -2.28
NOP9	YJL010C	RRP7	P25368	297 aa	Predicted RBP	0.79	□□□□□ -2.28
NOP9	YJL010C	TPS2	P31688	896 aa	Known RBP	0.79	□□□□□ -2.28
NOP9	YJL010C	SSE1	P32589	693 aa	Known RBP	0.79	□□□□□ -2.28
NOP9	YJL010C	MLH1	P38920	769 aa		0.79	□□□□□ -2.28
NOP9	YJL010C	FRT2	P39734	528 aa		0.79	□□□□□ -2.28
NOP9	YJL010C	STB1	P42845	420 aa		0.79	□□□□□ -2.28
NOP9	YJL010C	YJR030C	P47101	745 aa		0.79	□□□□□ -2.28
NOP9	YJL010C	COQ5	P49017	307 aa		0.79	□□□□□ -2.28
NOP9	YJL010C	YGR067C	P53243	804 aa		0.79	□□□□□ -2.28
NOP9	YJL010C	SLT2	Q00772	484 aa		0.79	□□□□□ -2.28
NOP9	YJL010C	RCF1	Q03713	159 aa		0.79	□□□□□ -2.28
NOP9	YJL010C	YLH47	Q06493	454 aa		0.79	□□□□□ -2.28
NOP9	YJL010C	YPR195C	Q06594	109 aa		0.79	□□□□□ -2.28
NOP9	YJL010C	NOP6	Q07623	225 aa	Known RBP	0.79	□□□□□ -2.28
NOP9	YJL010C	PEX27	Q08580	376 aa		0.79	□□□□□ -2.28
NOP9	YJL010C	RFM1	Q12192	310 aa		0.79	□□□□□ -2.28
NOP9	YJL010C	TFB5	Q3E7C1	72 aa	Predicted RBP	0.79	□□□□□ -2.28
NOP9	YJL010C	BI3	Q9ZZW7	517 aa		0.79	□□□□□ -2.28
NOP9	YJL010C	SPT7	P35177	1332 aa		0.79	□□□□□ -2.28
NOP9	YJL010C	MIR1	P23641	311 aa	Known RBP	0.79	□□□□□ -2.28
NOP9	YJL010C	MSP1	P28737	362 aa		0.79	□□□□□ -2.28
NOP9	YJL010C	LYS12	P40495	371 aa	Known RBP	0.79	□□□□□ -2.28
NOP9	YJL010C	HIT1	P46973	164 aa		0.79	□□□□□ -2.28
NOP9	YJL010C	AIM23	P47015	356 aa		0.79	□□□□□ -2.28
NOP9	YJL010C	YJR054W	P47114	497 aa		0.79	□□□□□ -2.28
NOP9	YJL010C	YGR015C	P53208	328 aa		0.79	□□□□□ -2.28
NOP9	YJL010C	RMI1	Q02685	241 aa		0.79	□□□□□ -2.28
NOP9	YJL010C	MRX8	Q05473	314 aa		0.79	□□□□□ -2.28
NOP9	YJL010C	DDC1	Q08949	612 aa		0.79	□□□□□ -2.28
NOP9	YJL010C	HIF1	Q12373	385 aa		0.79	□□□□□ -2.28
NOP9	YJL010C	YOR338W	Q99326	363 aa		0.79	□□□□□ -2.28
NOP9	YJL010C	AUS1	Q08409	1394 aa		0.78	□□□□□ -2.28
NOP9	YJL010C	STE2	D6VTK4	431 aa		0.78	□□□□□ -2.28
NOP9	YJL010C	PMT2	P31382	759 aa		0.78	□□□□□ -2.28
NOP9	YJL010C	SPS19	P32573	292 aa	Known RBP	0.78	□□□□□ -2.28
NOP9	YJL010C	BLI1	P35727	113 aa		0.78	□□□□□ -2.28
NOP9	YJL010C	PRY2	P36110	329 aa		0.78	□□□□□ -2.28
NOP9	YJL010C	SHE1	P38200	338 aa		0.78	□□□□□ -2.28
NOP9	YJL010C	RXT2	P38255	430 aa		0.78	□□□□□ -2.28
NOP9	YJL010C	LRP1	P38801	184 aa	Known RBP	0.78	□□□□□ -2.28
NOP9	YJL010C	YNL320W	P42840	284 aa		0.78	□□□□□ -2.28
NOP9	YJL010C	YFH1	Q07540	174 aa		0.78	□□□□□ -2.28
NOP9	YJL010C	YOL029C	Q08187	201 aa		0.78	□□□□□ -2.28
NOP9	YJL010C	DET1	Q99288	334 aa	Known RBP	0.78	□□□□□ -2.28
NOP9	YJL010C	UBA3	Q99344	299 aa		0.78	□□□□□ -2.28
NOP9	YJL010C	BGL2	P15703	313 aa	Known RBP	0.77	□□□□□ -2.29
NOP9	YJL010C	DBR1	P24309	405 aa	Known RBP	0.77	□□□□□ -2.29
NOP9	YJL010C	PHO84	P25297	587 aa	Known RBP	0.77	□□□□□ -2.29
NOP9	YJL010C	PSO2	P30620	661 aa		0.77	□□□□□ -2.29
NOP9	YJL010C	MSK1	P32048	576 aa		0.77	□□□□□ -2.29
NOP9	YJL010C	EFB1	P32471	206 aa	Known RBP	0.77	□□□□□ -2.29
NOP9	YJL010C	YKR015C	P36111	568 aa		0.77	□□□□□ -2.29
NOP9	YJL010C	SHE3	P38272	425 aa	Known RBP	0.77	□□□□□ -2.29
NOP9	YJL010C	YPT35	P38815	214 aa	Known RBP	0.77	□□□□□ -2.29
NOP9	YJL010C	GGC1	P38988	300 aa		0.77	□□□□□ -2.29
NOP9	YJL010C	YIR035C	P40579	254 aa		0.77	□□□□□ -2.29
NOP9	YJL010C	HST4	P53688	370 aa		0.77	□□□□□ -2.29
NOP9	YJL010C	API2	Q04413	109 aa		0.77	□□□□□ -2.29
NOP9	YJL010C	AIM33	Q04516	312 aa		0.77	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms