RNA–Protein interactions for RNA: YDR034C-D

YDR034C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR034C-D, Length 5,313 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR034C-D	YDR034C-D	SMF2	P38778	549 aa		2.69	□□□□□ -1.98
YDR034C-D	YDR034C-D	YER184C	P39961	794 aa		2.69	□□□□□ -1.98
YDR034C-D	YDR034C-D	CSM2	P40465	213 aa		2.69	□□□□□ -1.98
YDR034C-D	YDR034C-D	ESBP6	P53918	673 aa		2.69	□□□□□ -1.98
YDR034C-D	YDR034C-D	RVB1	Q03940	463 aa	Known RBP	2.69	□□□□□ -1.98
YDR034C-D	YDR034C-D	RRP17	Q04031	235 aa	Predicted RBP	2.69	□□□□□ -1.98
YDR034C-D	YDR034C-D	IVY1	Q04934	453 aa		2.69	□□□□□ -1.98
YDR034C-D	YDR034C-D	APC9	Q12107	265 aa		2.69	□□□□□ -1.98
YDR034C-D	YDR034C-D	TCD1	P38756	429 aa		2.69	□□□□□ -1.98
YDR034C-D	YDR034C-D	CGR1	P53188	120 aa		2.69	□□□□□ -1.98
YDR034C-D	YDR034C-D	SSK1	Q07084	712 aa		2.69	□□□□□ -1.98
YDR034C-D	YDR034C-D	SKI3	P17883	1432 aa	Known RBP	2.69	□□□□□ -1.98
YDR034C-D	YDR034C-D	CSM1	P25651	190 aa		2.69	□□□□□ -1.98
YDR034C-D	YDR034C-D	LIP5	P32875	414 aa		2.69	□□□□□ -1.98
YDR034C-D	YDR034C-D	DOA1	P36037	715 aa		2.69	□□□□□ -1.98
YDR034C-D	YDR034C-D	UTP18	P40362	594 aa	Predicted RBP	2.69	□□□□□ -1.98
YDR034C-D	YDR034C-D	HOC1	P47124	396 aa		2.69	□□□□□ -1.98
YDR034C-D	YDR034C-D	RMR1	P53060	241 aa		2.69	□□□□□ -1.98
YDR034C-D	YDR034C-D	RPL35A	P0CX84	120 aa	Known RBP	2.69	□□□□□ -1.98
YDR034C-D	YDR034C-D	RPL35B	P0CX85	120 aa	Known RBP	2.69	□□□□□ -1.98
YDR034C-D	YDR034C-D	MRX3	P38172	270 aa		2.69	□□□□□ -1.98
YDR034C-D	YDR034C-D	VPS52	P39904	641 aa		2.69	□□□□□ -1.98
YDR034C-D	YDR034C-D	PAC2	P39937	518 aa		2.69	□□□□□ -1.98
YDR034C-D	YDR034C-D	SLM3	Q12093	417 aa		2.69	□□□□□ -1.98
YDR034C-D	YDR034C-D	PAB1	P04147	577 aa	Known RBP RIP-Chip data	2.68	□□□□□ -1.98	not detected
YDR034C-D	YDR034C-D	DCC1	P25559	380 aa		2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	SKT5	P34226	696 aa		2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	PHD1	P36093	366 aa		2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	ISC1	P40015	477 aa	Known RBP	2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	SAD1	P43589	448 aa		2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	CTK3	P46963	296 aa	Predicted RBP	2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	AAT1	Q01802	451 aa		2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	FUS2	Q05670	677 aa		2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	MCR1	P36060	302 aa	Known RBP	2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	PXR1	P53335	271 aa	Predicted RBP	2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	NRD1	P53617	575 aa	Known RBP RIP-Chip data	2.68	□□□□□ -1.98	not detected
YDR034C-D	YDR034C-D	DCR2	Q05924	578 aa		2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	LOA1	Q06508	300 aa		2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	SSK22	P25390	1331 aa	Predicted RBP	2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	HEM1	P09950	548 aa	Predicted RBP	2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	RNQ1	P25367	405 aa		2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	REC114	P32841	428 aa		2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	MRPL6	P32904	214 aa		2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	ECM15	P35195	104 aa		2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	YCR041W	P37265	110 aa		2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	LYS1	P38998	373 aa	RIP-Chip data	2.68	□□□□□ -1.98	not detected
YDR034C-D	YDR034C-D	GGA1	Q06336	557 aa		2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	ASR1	Q06834	288 aa		2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	YPR1	Q12458	312 aa		2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	TCP1	P12612	559 aa	Known RBP	2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	ARF2	P19146	181 aa	Known RBP	2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	ERG9	P29704	444 aa		2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	GDS1	P41913	522 aa		2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	EFM5	P53200	248 aa	Known RBP	2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	BTS1	Q12051	335 aa		2.68	□□□□□ -1.98
YDR034C-D	YDR034C-D	RNA14	P25298	677 aa	Known RBP	2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	YEF1	P32622	495 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	MMF1	P40185	145 aa	Known RBP	2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	YJL043W	P47053	257 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	AZR1	P50080	613 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	YPL080C	Q02826	108 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	TLG2	Q08144	397 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	SRO7	Q12038	1033 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	YLR108C	Q12259	485 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	YOP1	Q12402	180 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	SLM5	P25345	492 aa	Known RBP	2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	JHD2	P47156	728 aa	Predicted RBP	2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	CWC23	P52868	283 aa	Predicted RBP	2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	YNL247W	P53852	767 aa	Known RBP	2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	SAM50	P53969	484 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	VPS60	Q03390	229 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	YAP7	Q08182	245 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	RGT2	Q12300	763 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	RPN6	Q12377	434 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	YKL183C-A	Q3E765	70 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	VMA5	P31412	392 aa	Known RBP	2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	PHA2	P32452	334 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	SSO1	P32867	290 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	SKG6	P32900	734 aa	Predicted RBP	2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	SEH1	P53011	349 aa	Known RBP	2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	YNL040W	P53960	456 aa	Predicted RBP	2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	ODC1	Q03028	310 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	SGT1	Q08446	395 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	YOR389W	Q08912	624 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	SEY1	Q99287	776 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	CHA1	P25379	360 aa	Known RBP	2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	SMB1	P40018	196 aa	Known RBP	2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	ERG28	P40030	148 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	COX16	P47081	118 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	SSN8	P47821	323 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	SUN4	P53616	420 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	PNG1	Q02890	363 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	SEC13	Q04491	297 aa	Known RBP	2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	GIM5	Q04493	163 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	NNT1	Q05874	261 aa		2.67	□□□□□ -1.98
YDR034C-D	YDR034C-D	THP2	O13539	261 aa	Known RBP	2.66	□□□□□ -1.98
YDR034C-D	YDR034C-D	VPS51	P36116	164 aa		2.66	□□□□□ -1.98
YDR034C-D	YDR034C-D	HAT2	P39984	401 aa		2.66	□□□□□ -1.98
YDR034C-D	YDR034C-D	KEG1	P43614	200 aa		2.66	□□□□□ -1.98
YDR034C-D	YDR034C-D	CTL1	Q03220	320 aa	Known RBP	2.66	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 65.4 ms