RNA–Protein interactions for RNA: YDR034C-D

YDR034C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YDR034C-D, Length 5,313 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR034C-DYDR034C-D DRS1P32892 752 aaKnown RBP6.86□□□□□ -1.31
YDR034C-DYDR034C-D MTC1P47018 478 aaKnown RBP6.33□□□□□ -1.4
YDR034C-DYDR034C-D TFA1P36100 482 aa6.32□□□□□ -1.4
YDR034C-DYDR034C-D BFR2Q06631 534 aaKnown RBP6.15□□□□□ -1.42
YDR034C-DYDR034C-D AVT3P36062 692 aa5.88□□□□□ -1.47
YDR034C-DYDR034C-D DIP2Q12220 943 aaPredicted RBP5.67□□□□□ -1.5
YDR034C-DYDR034C-D RQC2Q12532 1038 aaKnown RBP5.67□□□□□ -1.5
YDR034C-DYDR034C-D TAF7Q05021 590 aa5.55□□□□□ -1.52
YDR034C-DYDR034C-D DMA1P38823 416 aa5.38□□□□□ -1.55
YDR034C-DYDR034C-D LEO1P38439 464 aa5.22□□□□□ -1.57
YDR034C-DYDR034C-D RSE1Q04693 1361 aaKnown RBP5.13□□□□□ -1.59
YDR034C-DYDR034C-D PTP3P40048 928 aa5.03□□□□□ -1.6
YDR034C-DYDR034C-D SAS10Q12136 610 aaPredicted RBP5.03□□□□□ -1.6
YDR034C-DYDR034C-D LEU3P08638 886 aa5.01□□□□□ -1.61
YDR034C-DYDR034C-D RIM101P33400 625 aa4.97□□□□□ -1.61
YDR034C-DYDR034C-D ABP1P15891 592 aaKnown RBP4.97□□□□□ -1.61
YDR034C-DYDR034C-D SPT21P35209 758 aa4.97□□□□□ -1.61
YDR034C-DYDR034C-D SSP1P38871 571 aa4.93□□□□□ -1.62
YDR034C-DYDR034C-D RPL17AP05740 184 aaKnown RBP4.91□□□□□ -1.62
YDR034C-DYDR034C-D RPL17BP46990 184 aaKnown RBP4.91□□□□□ -1.62
YDR034C-DYDR034C-D ISW2Q08773 1120 aa4.89□□□□□ -1.63
YDR034C-DYDR034C-D RPG1P38249 964 aaKnown RBP4.87□□□□□ -1.63
YDR034C-DYDR034C-D OXP1P28273 1286 aa4.87□□□□□ -1.63
YDR034C-DYDR034C-D DMA2P53924 522 aa4.84□□□□□ -1.63
YDR034C-DYDR034C-D YLR271WQ06152 274 aa4.82□□□□□ -1.64
YDR034C-DYDR034C-D PRI1P10363 409 aa4.78□□□□□ -1.64
YDR034C-DYDR034C-D IFH1P39520 1085 aa4.74□□□□□ -1.65
YDR034C-DYDR034C-D RPN1P38764 993 aaKnown RBP4.74□□□□□ -1.65
YDR034C-DYDR034C-D REB1P21538 810 aa4.72□□□□□ -1.65
YDR034C-DYDR034C-D CST9Q06032 482 aa4.71□□□□□ -1.66
YDR034C-DYDR034C-D MGA2P40578 1113 aa4.7□□□□□ -1.66
YDR034C-DYDR034C-D YAH1Q12184 172 aaKnown RBP4.69□□□□□ -1.66
YDR034C-DYDR034C-D RLF2Q12495 606 aa4.69□□□□□ -1.66
YDR034C-DYDR034C-D ARP8Q12386 881 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
YDR034C-DYDR034C-D CKB1P43639 278 aa4.66□□□□□ -1.66
YDR034C-DYDR034C-D YPR148CQ06523 435 aa4.65□□□□□ -1.66
YDR034C-DYDR034C-D YKR023WP36119 530 aaKnown RBP4.65□□□□□ -1.67
YDR034C-DYDR034C-D PSD2P53037 1138 aaKnown RBP4.64□□□□□ -1.67
YDR034C-DYDR034C-D ORC1P54784 914 aaPredicted RBP4.63□□□□□ -1.67
YDR034C-DYDR034C-D RAM2P29703 316 aa4.61□□□□□ -1.67
YDR034C-DYDR034C-D RSM7P47150 247 aa4.59□□□□□ -1.67
YDR034C-DYDR034C-D DSF2P38213 736 aa4.58□□□□□ -1.68
YDR034C-DYDR034C-D YIL055CP40523 627 aaKnown RBP4.56□□□□□ -1.68
YDR034C-DYDR034C-D SET1P38827 1080 aaKnown RBP4.56□□□□□ -1.68
YDR034C-DYDR034C-D NOP8Q08287 484 aaPredicted RBP4.56□□□□□ -1.68
YDR034C-DYDR034C-D RCR1P38212 213 aa4.53□□□□□ -1.69
YDR034C-DYDR034C-D VPS70P47161 811 aa4.53□□□□□ -1.69
YDR034C-DYDR034C-D AAD16Q02895 342 aa4.53□□□□□ -1.69
YDR034C-DYDR034C-D TFC8Q12308 588 aa4.52□□□□□ -1.69
YDR034C-DYDR034C-D KIN1P13185 1064 aa4.52□□□□□ -1.69
YDR034C-DYDR034C-D SPB4P25808 606 aaPredicted RBP4.51□□□□□ -1.69
YDR034C-DYDR034C-D TSR3Q12094 313 aaKnown RBP4.51□□□□□ -1.69
YDR034C-DYDR034C-D IOC4Q04213 475 aa4.5□□□□□ -1.69
YDR034C-DYDR034C-D YNR021WP53723 404 aaKnown RBP4.5□□□□□ -1.69
YDR034C-DYDR034C-D AI2P03876 854 aa4.49□□□□□ -1.69
YDR034C-DYDR034C-D YML020WQ03722 664 aa4.49□□□□□ -1.69
YDR034C-DYDR034C-D NAP1P25293 417 aaKnown RBP4.48□□□□□ -1.69
YDR034C-DYDR034C-D AIM7Q12156 149 aa4.48□□□□□ -1.69
YDR034C-DYDR034C-D GUA1P38625 525 aaKnown RBP4.48□□□□□ -1.69
YDR034C-DYDR034C-D NUP42P49686 430 aaKnown RBP4.48□□□□□ -1.69
YDR034C-DYDR034C-D HOP09932 586 aa4.47□□□□□ -1.69
YDR034C-DYDR034C-D DCD1P06773 312 aa4.46□□□□□ -1.7
YDR034C-DYDR034C-D PBS2P08018 668 aa4.46□□□□□ -1.7
YDR034C-DYDR034C-D GLC3P32775 704 aa4.45□□□□□ -1.7
YDR034C-DYDR034C-D MAM3Q12296 706 aa4.45□□□□□ -1.7
YDR034C-DYDR034C-D DIT2P21595 489 aa4.44□□□□□ -1.7
YDR034C-DYDR034C-D MAK11P20484 414 aaKnown RBP4.42□□□□□ -1.7
YDR034C-DYDR034C-D BCH2P36122 765 aa4.42□□□□□ -1.7
YDR034C-DYDR034C-D SUB2Q07478 446 aaKnown RBP4.41□□□□□ -1.7
YDR034C-DYDR034C-D CDC27P38042 758 aa4.39□□□□□ -1.71
YDR034C-DYDR034C-D HPC2Q01448 625 aa4.39□□□□□ -1.71
YDR034C-DYDR034C-D SLX8P40072 274 aa4.39□□□□□ -1.71
YDR034C-DYDR034C-D MRX12P47084 519 aa4.38□□□□□ -1.71
YDR034C-DYDR034C-D IES2P40154 320 aa4.38□□□□□ -1.71
YDR034C-DYDR034C-D GLN1P32288 370 aaKnown RBP4.38□□□□□ -1.71
YDR034C-DYDR034C-D GEF1P37020 779 aa4.37□□□□□ -1.71
YDR034C-DYDR034C-D SSA1P10591 642 aaKnown RBP4.37□□□□□ -1.71
YDR034C-DYDR034C-D MRM1P25270 412 aa4.37□□□□□ -1.71
YDR034C-DYDR034C-D TFB3Q03290 321 aa4.36□□□□□ -1.71
YDR034C-DYDR034C-D PKC1P24583 1151 aa4.36□□□□□ -1.71
YDR034C-DYDR034C-D COQ8P27697 501 aa4.35□□□□□ -1.71
YDR034C-DYDR034C-D VPS29P38759 282 aa4.35□□□□□ -1.71
YDR034C-DYDR034C-D FAP1P53971 965 aa4.34□□□□□ -1.71
YDR034C-DYDR034C-D AIM44Q99299 758 aa4.34□□□□□ -1.71
YDR034C-DYDR034C-D EDS1P38073 919 aa4.34□□□□□ -1.71
YDR034C-DYDR034C-D EPS1P40557 701 aa4.33□□□□□ -1.72
YDR034C-DYDR034C-D REF2P42073 533 aaPredicted RBP4.33□□□□□ -1.72
YDR034C-DYDR034C-D MAK21Q12176 1025 aaKnown RBP4.33□□□□□ -1.72
YDR034C-DYDR034C-D NOP53Q12080 455 aaKnown RBP4.33□□□□□ -1.72
YDR034C-DYDR034C-D RTG3P38165 486 aa4.33□□□□□ -1.72
YDR034C-DYDR034C-D COX6P00427 148 aa4.32□□□□□ -1.72
YDR034C-DYDR034C-D BDF1P35817 686 aa4.32□□□□□ -1.72
YDR034C-DYDR034C-D PAM1P37304 830 aaKnown RBP4.32□□□□□ -1.72
YDR034C-DYDR034C-D BBC1P47068 1157 aa4.31□□□□□ -1.72
YDR034C-DYDR034C-D SEN54Q02825 467 aaPredicted RBP4.31□□□□□ -1.72
YDR034C-DYDR034C-D YDR090CQ03193 310 aa4.31□□□□□ -1.72
YDR034C-DYDR034C-D ATG32P40458 529 aa4.3□□□□□ -1.72
YDR034C-DYDR034C-D KTR1P27810 393 aaKnown RBP4.29□□□□□ -1.72
YDR034C-DYDR034C-D BIM1P40013 344 aa4.29□□□□□ -1.72
YDR034C-DYDR034C-D HGH1P48362 394 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms