RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C TOS2P50078 622 aa2.07□□□□□ -2.08
RPB11YOL005C PMT5P52867 743 aa2.07□□□□□ -2.08
RPB11YOL005C MST27P53176 234 aa2.07□□□□□ -2.08
RPB11YOL005C YMR010WQ03687 405 aa2.07□□□□□ -2.08
RPB11YOL005C URC2Q04411 772 aa2.07□□□□□ -2.08
RPB11YOL005C YPR091CQ06833 770 aa2.07□□□□□ -2.08
RPB11YOL005C LDS2Q08218 356 aa2.07□□□□□ -2.08
RPB11YOL005C DRS2P39524 1355 aa2.07□□□□□ -2.08
RPB11YOL005C SPP41P38904 1435 aa2.07□□□□□ -2.08
RPB11YOL005C GEA2P39993 1459 aaKnown RBP2.07□□□□□ -2.08
RPB11YOL005C NUP159P40477 1460 aa2.07□□□□□ -2.08
RPB11YOL005C RPA190P10964 1664 aaKnown RBP2.06□□□□□ -2.08
RPB11YOL005C MCR1P36060 302 aaKnown RBP2.06□□□□□ -2.08
RPB11YOL005C GAB1P41733 394 aa2.06□□□□□ -2.08
RPB11YOL005C ASN2P49090 572 aaKnown RBP2.06□□□□□ -2.08
RPB11YOL005C RTT102P53330 157 aa2.06□□□□□ -2.08
RPB11YOL005C YET2Q04210 160 aa2.06□□□□□ -2.08
RPB11YOL005C AAD15Q08361 143 aa2.06□□□□□ -2.08
RPB11YOL005C PLP2Q12017 286 aa2.06□□□□□ -2.08
RPB11YOL005C NAG1Q8TGN9 163 aa2.06□□□□□ -2.08
RPB11YOL005C BNI1P41832 1953 aa2.05□□□□□ -2.08
RPB11YOL005C PAB1P04147 577 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08 RIP-Chip
RPB11YOL005C RPL6BP05739 176 aaKnown RBP2.05□□□□□ -2.08
RPB11YOL005C RPB5P20434 215 aa2.05□□□□□ -2.08
RPB11YOL005C SPR1P32603 445 aa2.05□□□□□ -2.08
RPB11YOL005C RXT2P38255 430 aa2.05□□□□□ -2.08
RPB11YOL005C PFS1P38872 237 aa2.05□□□□□ -2.08
RPB11YOL005C BAT1P38891 393 aaKnown RBP2.05□□□□□ -2.08
RPB11YOL005C MLH1P38920 769 aa2.05□□□□□ -2.08
RPB11YOL005C ATG18P43601 500 aa2.05□□□□□ -2.08
RPB11YOL005C BNS1P50084 137 aa2.05□□□□□ -2.08
RPB11YOL005C CLD1P53264 445 aa2.05□□□□□ -2.08
RPB11YOL005C COS1P53822 381 aa2.05□□□□□ -2.08
RPB11YOL005C RPL6AQ02326 176 aaKnown RBP2.05□□□□□ -2.08
RPB11YOL005C NDL1Q06568 189 aa2.05□□□□□ -2.08
RPB11YOL005C MFG1Q07684 458 aa2.05□□□□□ -2.08
RPB11YOL005C FCY22Q12119 530 aa2.05□□□□□ -2.08
RPB11YOL005C PCL9Q12477 304 aa2.05□□□□□ -2.08
RPB11YOL005C VPS15P22219 1454 aa2.05□□□□□ -2.08
RPB11YOL005C TY2B-BQ12491 1770 aa2.05□□□□□ -2.08
RPB11YOL005C TY1B-DR3Q99231 1755 aa2.05□□□□□ -2.08
RPB11YOL005C TY1B-HO13535 1793 aa2.04□□□□□ -2.08
RPB11YOL005C TY1B-DR5P0C2I2 1755 aa2.04□□□□□ -2.08
RPB11YOL005C TY1B-DR6P0C2I3 1755 aa2.04□□□□□ -2.08
RPB11YOL005C TY1B-LR2P0C2I5 1755 aa2.04□□□□□ -2.08
RPB11YOL005C TY1B-LR3P0C2I6 1755 aaKnown RBP2.04□□□□□ -2.08
RPB11YOL005C TY1B-PR1P0C2I9 1755 aaKnown RBP2.04□□□□□ -2.08
RPB11YOL005C TY1B-PR2P0C2J0 1756 aa2.04□□□□□ -2.08
RPB11YOL005C TY1B-PR3P0C2J1 1755 aaKnown RBP2.04□□□□□ -2.08
RPB11YOL005C POL1P13382 1468 aa2.04□□□□□ -2.08
RPB11YOL005C CDC50P25656 391 aa2.04□□□□□ -2.08
RPB11YOL005C TIR2P33890 251 aa2.04□□□□□ -2.08
RPB11YOL005C WSC4P38739 605 aa2.04□□□□□ -2.08
RPB11YOL005C YHR177WP38867 453 aa2.04□□□□□ -2.08
RPB11YOL005C TSC11P40061 1430 aa2.04□□□□□ -2.08
RPB11YOL005C TY1B-JR1P47098 1755 aa2.04□□□□□ -2.08
RPB11YOL005C YOR1P53049 1477 aa2.04□□□□□ -2.08
RPB11YOL005C PRP3Q03338 469 aaPredicted RBP2.04□□□□□ -2.08
RPB11YOL005C TY1B-ML2Q03434 1755 aaKnown RBP2.04□□□□□ -2.08
RPB11YOL005C TY1B-ER1Q03612 1755 aa2.04□□□□□ -2.08
RPB11YOL005C RCF1Q03713 159 aa2.04□□□□□ -2.08
RPB11YOL005C TY1B-ML1Q04711 1755 aaKnown RBP2.04□□□□□ -2.08
RPB11YOL005C IPK1Q06667 281 aa2.04□□□□□ -2.08
RPB11YOL005C CMS1Q07897 291 aaKnown RBP2.04□□□□□ -2.08
RPB11YOL005C TY1B-GR2Q12269 1755 aa2.04□□□□□ -2.08
RPB11YOL005C TY1B-OLQ12273 1755 aa2.04□□□□□ -2.08
RPB11YOL005C TY1B-PLQ12414 1755 aaKnown RBP2.04□□□□□ -2.08
RPB11YOL005C YRF1-1P0CX20 1796 aa2.03□□□□□ -2.08
RPB11YOL005C YRF1-5P0CX21 1796 aa2.03□□□□□ -2.08
RPB11YOL005C YRF1-8P0CX22 1796 aa2.03□□□□□ -2.08
RPB11YOL005C SMC4Q12267 1418 aa2.03□□□□□ -2.08
RPB11YOL005C STH1P32597 1359 aa2.03□□□□□ -2.08
RPB11YOL005C DPH2P32461 534 aa2.03□□□□□ -2.08
RPB11YOL005C YBL028CP38202 106 aa2.03□□□□□ -2.08
RPB11YOL005C TIM17P39515 158 aa2.03□□□□□ -2.08
RPB11YOL005C SNL1P40548 159 aa2.03□□□□□ -2.08
RPB11YOL005C SEC27P41811 889 aaKnown RBP2.03□□□□□ -2.08
RPB11YOL005C MLC1P53141 149 aa2.03□□□□□ -2.08
RPB11YOL005C RRN9P53437 365 aa2.03□□□□□ -2.08
RPB11YOL005C REX2P54964 269 aaKnown RBP2.03□□□□□ -2.08
RPB11YOL005C PEX27Q08580 376 aa2.03□□□□□ -2.08
RPB11YOL005C HMS1Q12398 434 aa2.03□□□□□ -2.08
RPB11YOL005C FRE6Q12473 712 aa2.03□□□□□ -2.08
RPB11YOL005C SRN2Q99176 213 aa2.03□□□□□ -2.08
RPB11YOL005C VTH1P40438 1549 aa2.02□□□□□ -2.09
RPB11YOL005C VTH2P40890 1549 aa2.02□□□□□ -2.09
RPB11YOL005C FAB1P34756 2278 aa2.02□□□□□ -2.09
RPB11YOL005C NUP157P40064 1391 aaKnown RBP2.02□□□□□ -2.09
RPB11YOL005C SOD1P00445 154 aaKnown RBP2.02□□□□□ -2.09
RPB11YOL005C RNA1P11745 407 aaKnown RBP2.02□□□□□ -2.09
RPB11YOL005C HSP26P15992 214 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
RPB11YOL005C PTI1P39927 425 aaPredicted RBP2.02□□□□□ -2.09
RPB11YOL005C TRF5P48561 642 aaKnown RBP2.02□□□□□ -2.09
RPB11YOL005C MKC7P53379 596 aa2.02□□□□□ -2.09
RPB11YOL005C YDL199CQ12407 687 aa2.02□□□□□ -2.09
RPB11YOL005C TFB5Q3E7C1 72 aaPredicted RBP2.02□□□□□ -2.09
RPB11YOL005C MEX67Q99257 599 aaKnown RBP2.02□□□□□ -2.09
RPB11YOL005C PSK1P31374 1356 aa2.01□□□□□ -2.09
RPB11YOL005C COX4P04037 155 aa2.01□□□□□ -2.09
RPB11YOL005C SCH9P11792 824 aaKnown RBP2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms