RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W SCC4P40090 624 aa0.48□□□□□ -2.33
PRP39YML046W YIL059CP40520 121 aa0.48□□□□□ -2.33
PRP39YML046W MEP3P53390 489 aa0.48□□□□□ -2.33
PRP39YML046W SYF1Q04048 859 aaPredicted RBP0.48□□□□□ -2.33
PRP39YML046W PRM6Q04705 352 aa0.48□□□□□ -2.33
PRP39YML046W RAX1Q08760 435 aa0.48□□□□□ -2.33
PRP39YML046W YOR338WQ99326 363 aa0.48□□□□□ -2.33
PRP39YML046W TY1B-DR3Q99231 1755 aa0.48□□□□□ -2.33
PRP39YML046W HOM3P10869 527 aa0.48□□□□□ -2.33
PRP39YML046W CMK2P22517 447 aa0.48□□□□□ -2.33
PRP39YML046W SIN4P32259 974 aa0.48□□□□□ -2.33
PRP39YML046W ATG12P38316 186 aa0.48□□□□□ -2.33
PRP39YML046W FHL1P39521 936 aa0.48□□□□□ -2.33
PRP39YML046W RMD8P43620 662 aa0.48□□□□□ -2.33
PRP39YML046W YJR011CP47086 261 aaPredicted RBP0.48□□□□□ -2.33
PRP39YML046W VHT1P53241 593 aa0.48□□□□□ -2.33
PRP39YML046W TWF1P53250 332 aa0.48□□□□□ -2.33
PRP39YML046W YGR117CP53270 476 aa0.48□□□□□ -2.33
PRP39YML046W PGA3Q12746 312 aaKnown RBP0.48□□□□□ -2.33
PRP39YML046W TRA1P38811 3744 aa0.47□□□□□ -2.33
PRP39YML046W ILV5P06168 395 aaKnown RBP0.47□□□□□ -2.33
PRP39YML046W YPS1P32329 569 aa0.47□□□□□ -2.33
PRP39YML046W PHA2P32452 334 aa0.47□□□□□ -2.33
PRP39YML046W ATP3P38077 311 aaKnown RBP0.47□□□□□ -2.33
PRP39YML046W NRM1P53718 249 aa0.47□□□□□ -2.33
PRP39YML046W ZRG17P53735 605 aa0.47□□□□□ -2.33
PRP39YML046W TDA1Q03533 586 aa0.47□□□□□ -2.33
PRP39YML046W MFG1Q07684 458 aa0.47□□□□□ -2.33
PRP39YML046W TY3A-GQ12173 290 aa0.47□□□□□ -2.33
PRP39YML046W GRX6Q12438 231 aa0.47□□□□□ -2.33
PRP39YML046W TY3A-IQ99219 290 aa0.47□□□□□ -2.33
PRP39YML046W HPR1P17629 752 aaKnown RBP0.46□□□□□ -2.34
PRP39YML046W EPT1P22140 391 aa0.46□□□□□ -2.34
PRP39YML046W CTR86P25355 563 aa0.46□□□□□ -2.34
PRP39YML046W DPH5P32469 300 aaPredicted RBP0.46□□□□□ -2.34
PRP39YML046W HEL1P36113 551 aa0.46□□□□□ -2.34
PRP39YML046W TRR2P38816 342 aa0.46□□□□□ -2.34
PRP39YML046W YJR030CP47101 745 aa0.46□□□□□ -2.34
PRP39YML046W YGR250CP53316 781 aaKnown RBP0.46□□□□□ -2.34
PRP39YML046W GPI15P53961 229 aa0.46□□□□□ -2.34
PRP39YML046W TRM44Q02648 567 aaKnown RBP0.46□□□□□ -2.34
PRP39YML046W DDC1Q08949 612 aa0.46□□□□□ -2.34
PRP39YML046W SRL2Q12020 392 aa0.46□□□□□ -2.34
PRP39YML046W LDB17Q12342 491 aa0.46□□□□□ -2.34
PRP39YML046W STH1P32597 1359 aa0.46□□□□□ -2.34
PRP39YML046W RPL4AP10664 362 aaKnown RBP0.46□□□□□ -2.34
PRP39YML046W SRB2P34162 210 aa0.46□□□□□ -2.34
PRP39YML046W NOP4P37838 685 aaKnown RBP0.46□□□□□ -2.34
PRP39YML046W YHK8P38776 514 aa0.46□□□□□ -2.34
PRP39YML046W RPL4BP49626 362 aaKnown RBP0.46□□□□□ -2.34
PRP39YML046W KTR5P53966 522 aaPredicted RBP0.46□□□□□ -2.34
PRP39YML046W ENT5Q03769 411 aaKnown RBP0.46□□□□□ -2.34
PRP39YML046W YMR155WQ03795 547 aa0.46□□□□□ -2.34
PRP39YML046W INP2Q03824 705 aa0.46□□□□□ -2.34
PRP39YML046W YDR115WQ04598 105 aa0.46□□□□□ -2.34
PRP39YML046W HSP42Q12329 375 aa0.46□□□□□ -2.34
PRP39YML046W MEX67Q99257 599 aaKnown RBP0.46□□□□□ -2.34
PRP39YML046W CMC1P36064 111 aa0.45□□□□□ -2.34
PRP39YML046W HXT14P42833 540 aa0.45□□□□□ -2.34
PRP39YML046W RRP46P53256 223 aaPredicted RBP0.45□□□□□ -2.34
PRP39YML046W YML131WQ03102 365 aa0.45□□□□□ -2.34
PRP39YML046W VMS1Q04311 632 aaKnown RBP0.45□□□□□ -2.34
PRP39YML046W TAP42Q04372 366 aa0.45□□□□□ -2.34
PRP39YML046W HMS1Q12398 434 aa0.45□□□□□ -2.34
PRP39YML046W ECM29P38737 1868 aa0.45□□□□□ -2.34
PRP39YML046W LYS2P07702 1392 aa0.45□□□□□ -2.34
PRP39YML046W LAA1P39526 2014 aa0.45□□□□□ -2.34
PRP39YML046W RIP1P08067 215 aa0.44□□□□□ -2.34
PRP39YML046W RAD5P32849 1169 aaPredicted RBP0.44□□□□□ -2.34
PRP39YML046W SKG6P32900 734 aaPredicted RBP0.44□□□□□ -2.34
PRP39YML046W CBF5P33322 483 aaKnown RBP RIP-Chip data0.44□□□□□ -2.34not detected
PRP39YML046W ECM8P38246 354 aa0.44□□□□□ -2.34
PRP39YML046W LSM4P40070 187 aaKnown RBP0.44□□□□□ -2.34
PRP39YML046W TRF5P48561 642 aaKnown RBP0.44□□□□□ -2.34
PRP39YML046W MRX6P48564 524 aa0.44□□□□□ -2.34
PRP39YML046W RGM1Q00453 211 aa0.44□□□□□ -2.34
PRP39YML046W ERO1Q03103 563 aa0.44□□□□□ -2.34
PRP39YML046W ATG16Q03818 150 aa0.44□□□□□ -2.34
PRP39YML046W CDD1Q06549 142 aa0.44□□□□□ -2.34
PRP39YML046W SRO7Q12038 1033 aa0.44□□□□□ -2.34
PRP39YML046W ATG29Q12092 213 aa0.44□□□□□ -2.34
PRP39YML046W FUS3P16892 353 aaKnown RBP0.44□□□□□ -2.34
PRP39YML046W SNF6P18888 332 aa0.44□□□□□ -2.34
PRP39YML046W GIT1P25346 518 aa0.44□□□□□ -2.34
PRP39YML046W ATG15P25641 520 aa0.44□□□□□ -2.34
PRP39YML046W PDC2P32896 925 aa0.44□□□□□ -2.34
PRP39YML046W PMT1P33775 817 aa0.44□□□□□ -2.34
PRP39YML046W YAL037WP39728 267 aa0.44□□□□□ -2.34
PRP39YML046W RPS0BP46654 252 aaKnown RBP0.44□□□□□ -2.34
PRP39YML046W NBP1P52919 319 aaPredicted RBP0.44□□□□□ -2.34
PRP39YML046W YMR010WQ03687 405 aa0.44□□□□□ -2.34
PRP39YML046W TAF12Q03761 539 aa0.44□□□□□ -2.34
PRP39YML046W OPY2Q06810 360 aa0.44□□□□□ -2.34
PRP39YML046W FCY22Q12119 530 aa0.44□□□□□ -2.34
PRP39YML046W KRE5P22023 1365 aa0.44□□□□□ -2.34
PRP39YML046W HFA1P32874 2273 aa0.43□□□□□ -2.34
PRP39YML046W YJL197C-AP0C5P0 93 aa0.43□□□□□ -2.34
PRP39YML046W DAL5P15365 543 aa0.43□□□□□ -2.34
PRP39YML046W SRV2P17555 526 aaKnown RBP0.43□□□□□ -2.34
PRP39YML046W CKA2P19454 339 aa0.43□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms