RNA–Protein interactions for RNA: YGR039W

YGR039W, Transcript of Dubious open reading frame, yeast

Gene YGR039W, Length 312 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YGR039W	YGR039W	YNL234W	P53857	426 aa		2.96	□□□□□ -1.94
YGR039W	YGR039W	YNL134C	P53912	376 aa	Known RBP	2.96	□□□□□ -1.94
YGR039W	YGR039W	YNL050C	P53952	270 aa		2.96	□□□□□ -1.94
YGR039W	YGR039W	IRC15	Q02733	499 aa		2.96	□□□□□ -1.94
YGR039W	YGR039W	BET5	Q03630	159 aa		2.96	□□□□□ -1.94
YGR039W	YGR039W	NAT4	Q04751	285 aa		2.96	□□□□□ -1.94
YGR039W	YGR039W	DNL4	Q08387	944 aa	Predicted RBP	2.96	□□□□□ -1.94
YGR039W	YGR039W	RRP12	Q12754	1228 aa	Known RBP	2.96	□□□□□ -1.94
YGR039W	YGR039W	RGS2	Q99188	309 aa		2.96	□□□□□ -1.94
YGR039W	YGR039W	ARG4	P04076	463 aa	Predicted RBP	2.95	□□□□□ -1.94
YGR039W	YGR039W	TPK3	P05986	398 aa		2.95	□□□□□ -1.94
YGR039W	YGR039W	YAR066W	P0CX18	203 aa		2.95	□□□□□ -1.94
YGR039W	YGR039W	YHR214W	P0CX19	203 aa		2.95	□□□□□ -1.94
YGR039W	YGR039W	FRS2	P15625	503 aa	Known RBP	2.95	□□□□□ -1.94
YGR039W	YGR039W	UTR1	P21373	530 aa		2.95	□□□□□ -1.94
YGR039W	YGR039W	GPI12	P23797	304 aa		2.95	□□□□□ -1.94
YGR039W	YGR039W	DAL2	P25335	343 aa		2.95	□□□□□ -1.94
YGR039W	YGR039W	RPL5	P26321	297 aa	Known RBP	2.95	□□□□□ -1.94
YGR039W	YGR039W	SEC1	P30619	724 aa	Known RBP	2.95	□□□□□ -1.94
YGR039W	YGR039W	ERG1	P32476	496 aa	Known RBP	2.95	□□□□□ -1.94
YGR039W	YGR039W	COX13	P32799	129 aa		2.95	□□□□□ -1.94
YGR039W	YGR039W	MSN4	P33749	630 aa		2.95	□□□□□ -1.94
YGR039W	YGR039W	SKT5	P34226	696 aa		2.95	□□□□□ -1.94
YGR039W	YGR039W	KKQ8	P36004	724 aa		2.95	□□□□□ -1.94
YGR039W	YGR039W	YBR056W	P38081	501 aa		2.95	□□□□□ -1.94
YGR039W	YGR039W	TAE1	P38340	232 aa		2.95	□□□□□ -1.94
YGR039W	YGR039W	ATG7	P38862	630 aa		2.95	□□□□□ -1.94
YGR039W	YGR039W	FAA2	P39518	744 aa		2.95	□□□□□ -1.94
YGR039W	YGR039W	SHO1	P40073	367 aa		2.95	□□□□□ -1.94
YGR039W	YGR039W	UTP25	P40498	721 aa	Known RBP	2.95	□□□□□ -1.94
YGR039W	YGR039W	GCN20	P43535	752 aa	Known RBP	2.95	□□□□□ -1.94
YGR039W	YGR039W	YGR117C	P53270	476 aa		2.95	□□□□□ -1.94
YGR039W	YGR039W	COS1	P53822	381 aa		2.95	□□□□□ -1.94
YGR039W	YGR039W	TDA7	P53882	636 aa	Predicted RBP	2.95	□□□□□ -1.94
YGR039W	YGR039W	ODC1	Q03028	310 aa		2.95	□□□□□ -1.94
YGR039W	YGR039W	UBX2	Q04228	584 aa		2.95	□□□□□ -1.94
YGR039W	YGR039W	VPS74	Q06385	345 aa		2.95	□□□□□ -1.94
YGR039W	YGR039W	YOL075C	Q08234	1294 aa		2.95	□□□□□ -1.94
YGR039W	YGR039W	YOL107W	Q12239	342 aa		2.95	□□□□□ -1.94
YGR039W	YGR039W	ADF1	Q2V2Q1	113 aa		2.95	□□□□□ -1.94
YGR039W	YGR039W	TEF1	P02994	458 aa	Known RBP	2.94	□□□□□ -1.94
YGR039W	YGR039W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	2.94	□□□□□ -1.94	not detected
YGR039W	YGR039W	RAD1	P06777	1100 aa		2.94	□□□□□ -1.94
YGR039W	YGR039W	ATP1	P07251	545 aa	Known RBP	2.94	□□□□□ -1.94
YGR039W	YGR039W	DEG1	P31115	442 aa	Known RBP	2.94	□□□□□ -1.94
YGR039W	YGR039W	SIP2	P34164	415 aa	Known RBP	2.94	□□□□□ -1.94
YGR039W	YGR039W	YKT6	P36015	200 aa	Known RBP	2.94	□□□□□ -1.94
YGR039W	YGR039W	MST28	P39552	234 aa		2.94	□□□□□ -1.94
YGR039W	YGR039W	HAT2	P39984	401 aa		2.94	□□□□□ -1.94
YGR039W	YGR039W	DSE1	P40077	573 aa		2.94	□□□□□ -1.94
YGR039W	YGR039W	SEC9	P40357	651 aa		2.94	□□□□□ -1.94
YGR039W	YGR039W	NAS6	P50086	228 aa		2.94	□□□□□ -1.94
YGR039W	YGR039W	TIM21	P53220	239 aa		2.94	□□□□□ -1.94
YGR039W	YGR039W	BIO4	P53630	237 aa		2.94	□□□□□ -1.94
YGR039W	YGR039W	CRZ1	P53968	678 aa		2.94	□□□□□ -1.94
YGR039W	YGR039W	SRL4	Q03085	281 aa		2.94	□□□□□ -1.94
YGR039W	YGR039W	GAT3	Q07928	141 aa		2.94	□□□□□ -1.94
YGR039W	YGR039W	NCA2	Q12374	616 aa		2.94	□□□□□ -1.94
YGR039W	YGR039W	YOP1	Q12402	180 aa		2.94	□□□□□ -1.94
YGR039W	YGR039W	PRP46	Q12417	451 aa	Predicted RBP	2.94	□□□□□ -1.94
YGR039W	YGR039W	YOR338W	Q99326	363 aa		2.94	□□□□□ -1.94
YGR039W	YGR039W	SAC3	P46674	1301 aa		2.93	□□□□□ -1.94
YGR039W	YGR039W	RPL24A	P04449	155 aa	Known RBP	2.93	□□□□□ -1.94
YGR039W	YGR039W	MSF1	P08425	469 aa		2.93	□□□□□ -1.94
YGR039W	YGR039W	PRB1	P09232	635 aa		2.93	□□□□□ -1.94
YGR039W	YGR039W	SSC1	P0CS90	654 aa	Known RBP	2.93	□□□□□ -1.94
YGR039W	YGR039W	EXG1	P23776	448 aa	Known RBP	2.93	□□□□□ -1.94
YGR039W	YGR039W	YCR022C	P25620	114 aa		2.93	□□□□□ -1.94
YGR039W	YGR039W	ARO4	P32449	370 aa	Known RBP	2.93	□□□□□ -1.94
YGR039W	YGR039W	DPH5	P32469	300 aa	Predicted RBP	2.93	□□□□□ -1.94
YGR039W	YGR039W	GLC7	P32598	312 aa	Known RBP	2.93	□□□□□ -1.94
YGR039W	YGR039W	IMP3	P32899	183 aa	Predicted RBP	2.93	□□□□□ -1.94
YGR039W	YGR039W	RSM22	P36056	628 aa		2.93	□□□□□ -1.94
YGR039W	YGR039W	IST2	P38250	946 aa		2.93	□□□□□ -1.94
YGR039W	YGR039W	YAR1	P46683	200 aa		2.93	□□□□□ -1.94
YGR039W	YGR039W	AVT4	P50944	713 aa		2.93	□□□□□ -1.94
YGR039W	YGR039W	YGR168C	P53293	376 aa		2.93	□□□□□ -1.94
YGR039W	YGR039W	PET117	Q02771	107 aa		2.93	□□□□□ -1.94
YGR039W	YGR039W	RVB1	Q03940	463 aa	Known RBP	2.93	□□□□□ -1.94
YGR039W	YGR039W	RRN11	Q04712	507 aa		2.93	□□□□□ -1.94
YGR039W	YGR039W	COX20	Q04935	205 aa		2.93	□□□□□ -1.94
YGR039W	YGR039W	BUR2	Q05949	395 aa		2.93	□□□□□ -1.94
YGR039W	YGR039W	ALE1	Q08548	619 aa		2.93	□□□□□ -1.94
YGR039W	YGR039W	TIM18	Q08749	192 aa		2.93	□□□□□ -1.94
YGR039W	YGR039W	TIP41	Q12199	356 aa		2.93	□□□□□ -1.94
YGR039W	YGR039W	TPT1	Q12272	230 aa	Known RBP	2.93	□□□□□ -1.94
YGR039W	YGR039W	YRM1	Q12340	786 aa		2.93	□□□□□ -1.94
YGR039W	YGR039W	MED4	Q12343	284 aa		2.93	□□□□□ -1.94
YGR039W	YGR039W	YPR1	Q12458	312 aa		2.93	□□□□□ -1.94
YGR039W	YGR039W	UBA3	Q99344	299 aa		2.93	□□□□□ -1.94
YGR039W	YGR039W	POM152	P39685	1337 aa		2.93	□□□□□ -1.94
YGR039W	YGR039W	COX2	P00410	251 aa		2.92	□□□□□ -1.94
YGR039W	YGR039W	ARG80	P07249	177 aa		2.92	□□□□□ -1.94
YGR039W	YGR039W	CAP2	P13517	287 aa		2.92	□□□□□ -1.94
YGR039W	YGR039W	POL30	P15873	258 aa	Known RBP	2.92	□□□□□ -1.94
YGR039W	YGR039W	MRPL8	P22353	238 aa		2.92	□□□□□ -1.94
YGR039W	YGR039W	DOA4	P32571	926 aa		2.92	□□□□□ -1.94
YGR039W	YGR039W	YEF1	P32622	495 aa		2.92	□□□□□ -1.94
YGR039W	YGR039W	MYO3	P36006	1272 aa		2.92	□□□□□ -1.94
YGR039W	YGR039W	MCR1	P36060	302 aa	Known RBP	2.92	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms