RNA–Protein interactions for RNA: YNL299W

TRF5, Transcript of Non-canonical poly(A) polymerase, yeast

Gene TRF5, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRF5	YNL299W	RQC1	Q05468	723 aa	Known RBP	4.08	□□□□□ -1.76
TRF5	YNL299W	HEL2	Q05580	639 aa	Known RBP	4.08	□□□□□ -1.76
TRF5	YNL299W	MRI1	Q06489	411 aa	Known RBP	4.08	□□□□□ -1.76
TRF5	YNL299W	YFT2	Q06676	274 aa		4.08	□□□□□ -1.76
TRF5	YNL299W	APC5	Q08683	685 aa		4.08	□□□□□ -1.76
TRF5	YNL299W	YOR352W	Q08816	343 aa		4.08	□□□□□ -1.76
TRF5	YNL299W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
TRF5	YNL299W	RBD2	Q12270	262 aa		4.08	□□□□□ -1.76
TRF5	YNL299W	PST2	Q12335	198 aa	Known RBP	4.08	□□□□□ -1.76
TRF5	YNL299W	JLP1	Q12358	412 aa		4.08	□□□□□ -1.76
TRF5	YNL299W	MHF2	Q3E829	80 aa		4.08	□□□□□ -1.76
TRF5	YNL299W	HEM2	P05373	342 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	PDE2	P06776	526 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	SEC53	P07283	254 aa	Known RBP	4.07	□□□□□ -1.76
TRF5	YNL299W	COS2	P0CX12	379 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	COS3	P0CX13	379 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	SGF29	P25554	259 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	FEN2	P25621	512 aa	Known RBP	4.07	□□□□□ -1.76
TRF5	YNL299W	YJU2	P28320	278 aa	Predicted RBP	4.07	□□□□□ -1.76
TRF5	YNL299W	SPT14	P32363	452 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	CDC5	P32562	705 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	SKT5	P34226	696 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	UME6	P39001	836 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	CCT6	P39079	546 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	ERV46	P39727	415 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	RGI1	P40043	161 aa	Predicted RBP	4.07	□□□□□ -1.76
TRF5	YNL299W	COG3	P40094	801 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	YKE4	P40544	346 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	BOL2	P53082	120 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	EFM5	P53200	248 aa	Known RBP	4.07	□□□□□ -1.76
TRF5	YNL299W	TIM13	P53299	105 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	DBP6	P53734	629 aa	Known RBP	4.07	□□□□□ -1.76
TRF5	YNL299W	IBD2	P53892	351 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	REG1	Q00816	1014 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	NEJ1	Q06148	342 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	ARR3	Q06598	404 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	AIM6	Q07716	390 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	UAF30	Q08747	228 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	LEA1	Q08963	238 aa	Predicted RBP	4.07	□□□□□ -1.76
TRF5	YNL299W	SMF3	Q12078	473 aa	Predicted RBP	4.07	□□□□□ -1.76
TRF5	YNL299W	YLR126C	Q12288	251 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	SUL2	Q12325	893 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	WTM1	Q12363	437 aa	Known RBP	4.07	□□□□□ -1.76
TRF5	YNL299W	RMD5	Q12508	421 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	CAP2	P13517	287 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	KGD2	P19262	463 aa	Predicted RBP	4.07	□□□□□ -1.76
TRF5	YNL299W	RPB4	P20433	221 aa	Predicted RBP	4.07	□□□□□ -1.76
TRF5	YNL299W	DCG1	P32460	244 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	MSS1	P32559	526 aa	Predicted RBP	4.07	□□□□□ -1.76
TRF5	YNL299W	RPS0A	P32905	252 aa	Known RBP	4.07	□□□□□ -1.76
TRF5	YNL299W	YKL063C	P35725	167 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	TEF4	P36008	412 aa	Known RBP	4.07	□□□□□ -1.76
TRF5	YNL299W	CAF4	P36130	643 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	YBR053C	P38235	358 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	SIF2	P38262	535 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	FTH1	P38310	465 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	MTG2	P38860	518 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	ATG7	P38862	630 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	FMO1	P38866	432 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	PRM9	P39551	298 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	HAT2	P39984	401 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	SER3	P40054	469 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	SOK1	P40317	901 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	YIL077C	P40508	320 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	FAF1	P40546	346 aa	Predicted RBP	4.07	□□□□□ -1.76
TRF5	YNL299W	SIP4	P46954	829 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	BPL1	P48445	690 aa	Predicted RBP	4.07	□□□□□ -1.76
TRF5	YNL299W	TIM10	P87108	93 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	NUP49	Q02199	472 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	SMA1	Q02651	245 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	PFA5	Q03289	374 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	GOT1	Q03554	138 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	ENT5	Q03769	411 aa	Known RBP	4.07	□□□□□ -1.76
TRF5	YNL299W	DLT1	Q04216	342 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	COX20	Q04935	205 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	SWC7	Q06707	132 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	PEX27	Q08580	376 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	DDC1	Q08949	612 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	MRH1	Q12117	320 aa	Predicted RBP	4.07	□□□□□ -1.76
TRF5	YNL299W	COX17	Q12287	69 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	RTR2	Q12378	196 aa		4.07	□□□□□ -1.76
TRF5	YNL299W	UBR1	P19812	1950 aa		4.06	□□□□□ -1.76
TRF5	YNL299W	LAT1	P12695	482 aa	Known RBP	4.06	□□□□□ -1.76
TRF5	YNL299W	AMD1	P15274	810 aa	Known RBP	4.06	□□□□□ -1.76
TRF5	YNL299W	AAT2	P23542	418 aa	Known RBP	4.06	□□□□□ -1.76
TRF5	YNL299W	DSS4	P32601	143 aa		4.06	□□□□□ -1.76
TRF5	YNL299W	TOD6	P34219	525 aa		4.06	□□□□□ -1.76
TRF5	YNL299W	ZRT3	P34240	503 aa		4.06	□□□□□ -1.76
TRF5	YNL299W	MRPL36	P36531	177 aa		4.06	□□□□□ -1.76
TRF5	YNL299W	RIB1	P38066	345 aa		4.06	□□□□□ -1.76
TRF5	YNL299W	YBR056W	P38081	501 aa		4.06	□□□□□ -1.76
TRF5	YNL299W	FMP23	P38231	175 aa		4.06	□□□□□ -1.76
TRF5	YNL299W	ARP1	P38696	384 aa		4.06	□□□□□ -1.76
TRF5	YNL299W	MNN9	P39107	395 aa	Known RBP	4.06	□□□□□ -1.76
TRF5	YNL299W	PCL6	P40038	420 aa		4.06	□□□□□ -1.76
TRF5	YNL299W	FMP10	P40098	244 aa		4.06	□□□□□ -1.76
TRF5	YNL299W	MMF1	P40185	145 aa	Known RBP	4.06	□□□□□ -1.76
TRF5	YNL299W	LRO1	P40345	661 aa		4.06	□□□□□ -1.76
TRF5	YNL299W	CDC1	P40986	491 aa		4.06	□□□□□ -1.76
TRF5	YNL299W	ROK1	P45818	564 aa	Predicted RBP	4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms