RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W MNP1P53163 194 aaPredicted RBP2.5□□□□□ -2.01
CSI1YMR025W RRP9Q06506 573 aaKnown RBP2.5□□□□□ -2.01
CSI1YMR025W VAM3Q12241 283 aa2.5□□□□□ -2.01
CSI1YMR025W YDR061WQ12298 539 aa2.5□□□□□ -2.01
CSI1YMR025W TY1B-DR3Q99231 1755 aa2.5□□□□□ -2.01
CSI1YMR025W NUP170P38181 1502 aa2.49□□□□□ -2.01
CSI1YMR025W SCEIP03882 235 aa2.49□□□□□ -2.01
CSI1YMR025W EXG1P23776 448 aaKnown RBP2.49□□□□□ -2.01
CSI1YMR025W RRP4P38792 359 aaKnown RBP2.49□□□□□ -2.01
CSI1YMR025W CHL4P38907 458 aa2.49□□□□□ -2.01
CSI1YMR025W ARF3P40994 183 aaRIP-Chip data2.49□□□□□ -2.01not detected
CSI1YMR025W YGR250CP53316 781 aaKnown RBP2.49□□□□□ -2.01
CSI1YMR025W GRX6Q12438 231 aa2.49□□□□□ -2.01
CSI1YMR025W SNQ2P32568 1501 aaKnown RBP2.48□□□□□ -2.01
CSI1YMR025W PDR12Q02785 1511 aa2.48□□□□□ -2.01
CSI1YMR025W IQG1Q12280 1495 aa2.48□□□□□ -2.01
CSI1YMR025W RPA49Q01080 415 aaPredicted RBP2.48□□□□□ -2.01
CSI1YMR025W ATG34Q12292 412 aa2.48□□□□□ -2.01
CSI1YMR025W BUD3P25558 1636 aa2.48□□□□□ -2.01
CSI1YMR025W TRM3Q07527 1436 aa2.48□□□□□ -2.01
CSI1YMR025W TY1B-JR2P47100 1755 aaKnown RBP2.48□□□□□ -2.01
CSI1YMR025W TY1B-ER2Q03619 1755 aa2.48□□□□□ -2.01
CSI1YMR025W TY1B-MR1Q04214 1755 aa2.48□□□□□ -2.01
CSI1YMR025W TY1B-MR2Q04670 1755 aaKnown RBP2.48□□□□□ -2.01
CSI1YMR025W TY1B-LR1Q12088 1755 aaKnown RBP2.48□□□□□ -2.01
CSI1YMR025W TY1B-NL1Q12112 1755 aa2.48□□□□□ -2.01
CSI1YMR025W TY1B-GR1Q12141 1755 aa2.48□□□□□ -2.01
CSI1YMR025W TY1B-BLQ12490 1755 aa2.48□□□□□ -2.01
CSI1YMR025W PDR10P51533 1564 aa2.48□□□□□ -2.01
CSI1YMR025W IRC20Q06554 1556 aa2.48□□□□□ -2.01
CSI1YMR025W DNF2Q12675 1612 aa2.47□□□□□ -2.01
CSI1YMR025W CAP2P13517 287 aa2.47□□□□□ -2.01
CSI1YMR025W DEP1P31385 405 aa2.47□□□□□ -2.01
CSI1YMR025W COX13P32799 129 aa2.47□□□□□ -2.01
CSI1YMR025W UTP9P38882 575 aaKnown RBP2.47□□□□□ -2.01
CSI1YMR025W VPS72Q03388 795 aa2.47□□□□□ -2.01
CSI1YMR025W LOT6Q07923 191 aa2.47□□□□□ -2.01
CSI1YMR025W RPO21P04050 1733 aaKnown RBP2.46□□□□□ -2.02
CSI1YMR025W TPI1P00942 248 aaKnown RBP2.46□□□□□ -2.02
CSI1YMR025W COS1P53822 381 aa2.46□□□□□ -2.02
CSI1YMR025W ALF1P53904 254 aa2.46□□□□□ -2.02
CSI1YMR025W RPL21AQ02753 160 aaKnown RBP2.46□□□□□ -2.02
CSI1YMR025W COG4Q06096 861 aa2.46□□□□□ -2.02
CSI1YMR025W MED1Q12321 566 aa2.46□□□□□ -2.02
CSI1YMR025W RRI2Q12348 645 aa2.46□□□□□ -2.02
CSI1YMR025W RPL21BQ12672 160 aaKnown RBP2.46□□□□□ -2.02
CSI1YMR025W PIS1P06197 220 aaKnown RBP2.45□□□□□ -2.02
CSI1YMR025W MRP7P12687 371 aa2.45□□□□□ -2.02
CSI1YMR025W YEF1P32622 495 aa2.45□□□□□ -2.02
CSI1YMR025W CYM1P32898 989 aa2.45□□□□□ -2.02
CSI1YMR025W NAB3P38996 802 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
CSI1YMR025W URH1Q04179 340 aa2.45□□□□□ -2.02
CSI1YMR025W RRP45Q05636 305 aaKnown RBP2.45□□□□□ -2.02
CSI1YMR025W GDB1Q06625 1536 aa2.45□□□□□ -2.02
CSI1YMR025W ULS1Q08562 1619 aa2.45□□□□□ -2.02
CSI1YMR025W NTE1Q04958 1679 aa2.44□□□□□ -2.02
CSI1YMR025W IMA3P0CW40 589 aa2.44□□□□□ -2.02
CSI1YMR025W IMA4P0CW41 589 aa2.44□□□□□ -2.02
CSI1YMR025W RPN12P32496 274 aa2.44□□□□□ -2.02
CSI1YMR025W ATP3P38077 311 aaKnown RBP2.44□□□□□ -2.02
CSI1YMR025W RRN10P38204 145 aa2.44□□□□□ -2.02
CSI1YMR025W FRT2P39734 528 aa2.44□□□□□ -2.02
CSI1YMR025W YGR067CP53243 804 aa2.44□□□□□ -2.02
CSI1YMR025W SNT309Q06091 175 aaPredicted RBP2.44□□□□□ -2.02
CSI1YMR025W IMA2Q08295 589 aa2.44□□□□□ -2.02
CSI1YMR025W TIR4Q12218 487 aaPredicted RBP2.44□□□□□ -2.02
CSI1YMR025W NCA2Q12374 616 aa2.44□□□□□ -2.02
CSI1YMR025W CEX1Q12453 761 aa2.44□□□□□ -2.02
CSI1YMR025W SPO14P36126 1683 aa2.44□□□□□ -2.02
CSI1YMR025W CAT8P39113 1433 aa2.43□□□□□ -2.02
CSI1YMR025W YOR093CQ12275 1648 aa2.43□□□□□ -2.02
CSI1YMR025W MET17P06106 444 aa2.43□□□□□ -2.02
CSI1YMR025W ROX1P25042 368 aa2.43□□□□□ -2.02
CSI1YMR025W PTK1P36002 662 aaPredicted RBP2.43□□□□□ -2.02
CSI1YMR025W NDE1P40215 560 aa2.43□□□□□ -2.02
CSI1YMR025W IRC6P43615 237 aa2.43□□□□□ -2.02
CSI1YMR025W CPR7P47103 393 aa2.43□□□□□ -2.02
CSI1YMR025W COS5P47187 383 aa2.43□□□□□ -2.02
CSI1YMR025W COS7Q07788 383 aa2.43□□□□□ -2.02
CSI1YMR025W APC2Q12440 853 aa2.43□□□□□ -2.02
CSI1YMR025W PDR15Q04182 1529 aaKnown RBP2.42□□□□□ -2.02
CSI1YMR025W RPS19AP07280 144 aaKnown RBP2.42□□□□□ -2.02
CSI1YMR025W RPS19BP07281 144 aaPredicted RBP2.42□□□□□ -2.02
CSI1YMR025W HOM3P10869 527 aa2.42□□□□□ -2.02
CSI1YMR025W CKA1P15790 372 aa2.42□□□□□ -2.02
CSI1YMR025W YME2P32843 850 aa2.42□□□□□ -2.02
CSI1YMR025W VHT1P53241 593 aa2.42□□□□□ -2.02
CSI1YMR025W PRM6Q04705 352 aa2.42□□□□□ -2.02
CSI1YMR025W YSP2Q06681 1438 aa2.42□□□□□ -2.02
CSI1YMR025W SAL1D6W196 494 aa2.41□□□□□ -2.02
CSI1YMR025W AGA2P32781 87 aa2.41□□□□□ -2.02
CSI1YMR025W TOS3P43637 560 aa2.41□□□□□ -2.02
CSI1YMR025W YLR345WQ06137 509 aa2.41□□□□□ -2.02
CSI1YMR025W BUG1Q12191 341 aa2.41□□□□□ -2.02
CSI1YMR025W RTN2Q12443 393 aa2.41□□□□□ -2.02
CSI1YMR025W TY3B-GQ99315 1547 aa2.41□□□□□ -2.02
CSI1YMR025W DOP1Q03921 1698 aa2.41□□□□□ -2.02
CSI1YMR025W SRV2P17555 526 aaKnown RBP2.4□□□□□ -2.03
CSI1YMR025W CMK2P22517 447 aa2.4□□□□□ -2.03
CSI1YMR025W NTC20P38302 140 aaPredicted RBP2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 90.2 ms