RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W TOR1P35169 2470 aa3.75□□□□□ -1.81
PTM1YKL039W RPS8AP0CX39 200 aaKnown RBP3.75□□□□□ -1.81
PTM1YKL039W RPS8BP0CX40 200 aaKnown RBP3.75□□□□□ -1.81
PTM1YKL039W NOP1P15646 327 aaKnown RBP3.75□□□□□ -1.81
PTM1YKL039W YAL037WP39728 267 aa3.75□□□□□ -1.81
PTM1YKL039W PAN6P40459 309 aa3.75□□□□□ -1.81
PTM1YKL039W SSU1P41930 458 aa3.75□□□□□ -1.81
PTM1YKL039W SDT1P53078 280 aa3.75□□□□□ -1.81
PTM1YKL039W GIP3Q03016 1276 aa3.75□□□□□ -1.81
PTM1YKL039W VPS60Q03390 229 aa3.75□□□□□ -1.81
PTM1YKL039W BET5Q03630 159 aa3.75□□□□□ -1.81
PTM1YKL039W YDR131CQ03899 556 aa3.75□□□□□ -1.81
PTM1YKL039W RBD2Q12270 262 aa3.75□□□□□ -1.81
PTM1YKL039W RNR2P09938 399 aaKnown RBP3.74□□□□□ -1.81
PTM1YKL039W SPO12P17123 173 aa3.74□□□□□ -1.81
PTM1YKL039W SRV2P17555 526 aaKnown RBP3.74□□□□□ -1.81
PTM1YKL039W ADK2P26364 225 aa3.74□□□□□ -1.81
PTM1YKL039W NOC2P39744 710 aaKnown RBP3.74□□□□□ -1.81
PTM1YKL039W PHO86P46956 311 aa3.74□□□□□ -1.81
PTM1YKL039W ADD37Q03233 198 aa3.74□□□□□ -1.81
PTM1YKL039W PAL1Q05518 499 aaKnown RBP3.74□□□□□ -1.81
PTM1YKL039W INM2Q05533 292 aa3.74□□□□□ -1.81
PTM1YKL039W NKP2Q06162 153 aa3.74□□□□□ -1.81
PTM1YKL039W MHR1Q06630 226 aa3.74□□□□□ -1.81
PTM1YKL039W FDH1Q08911 376 aa3.74□□□□□ -1.81
PTM1YKL039W AFI1Q99222 893 aa3.74□□□□□ -1.81
PTM1YKL039W ECM29P38737 1868 aa3.74□□□□□ -1.81
PTM1YKL039W CYC3P06182 269 aa3.73□□□□□ -1.81
PTM1YKL039W NFT1P0CE68 1218 aa3.73□□□□□ -1.81
PTM1YKL039W URA4P20051 364 aa3.73□□□□□ -1.81
PTM1YKL039W RAD57P25301 460 aa3.73□□□□□ -1.81
PTM1YKL039W DAL2P25335 343 aa3.73□□□□□ -1.81
PTM1YKL039W DEP1P31385 405 aa3.73□□□□□ -1.81
PTM1YKL039W SPR1P32603 445 aa3.73□□□□□ -1.81
PTM1YKL039W MUD1P32605 298 aaKnown RBP3.73□□□□□ -1.81
PTM1YKL039W HYR1P40581 163 aaKnown RBP3.73□□□□□ -1.81
PTM1YKL039W AZR1P50080 613 aa3.73□□□□□ -1.81
PTM1YKL039W PHB2P50085 310 aa3.73□□□□□ -1.81
PTM1YKL039W DIS3Q08162 1001 aaKnown RBP3.73□□□□□ -1.81
PTM1YKL039W TMC1Q08422 150 aaPredicted RBP3.73□□□□□ -1.81
PTM1YKL039W YDR524C-BQ3E6R4 66 aa3.73□□□□□ -1.81
PTM1YKL039W UBR2Q07963 1872 aa3.73□□□□□ -1.81
PTM1YKL039W CLB1P24868 471 aa3.72□□□□□ -1.81
PTM1YKL039W RPC53P25441 422 aa3.72□□□□□ -1.81
PTM1YKL039W URA7P28274 579 aaKnown RBP3.72□□□□□ -1.81
PTM1YKL039W SPC19Q03954 165 aa3.72□□□□□ -1.81
PTM1YKL039W TY1B-AO13527 1196 aaKnown RBP3.72□□□□□ -1.81
PTM1YKL039W CLN1P20437 546 aa3.72□□□□□ -1.81
PTM1YKL039W KAR9P32526 644 aa3.72□□□□□ -1.81
PTM1YKL039W TOR2P32600 2474 aaKnown RBP3.72□□□□□ -1.81
PTM1YKL039W MRPL10P36520 322 aa3.72□□□□□ -1.81
PTM1YKL039W RRN10P38204 145 aa3.72□□□□□ -1.81
PTM1YKL039W MMS4P38257 691 aa3.72□□□□□ -1.81
PTM1YKL039W RRP4P38792 359 aaKnown RBP3.72□□□□□ -1.81
PTM1YKL039W PCF11P39081 626 aaPredicted RBP3.72□□□□□ -1.81
PTM1YKL039W CWC25P53854 179 aaKnown RBP3.72□□□□□ -1.81
PTM1YKL039W ACL4Q03771 387 aa3.72□□□□□ -1.81
PTM1YKL039W VPS20Q04272 221 aa3.72□□□□□ -1.81
PTM1YKL039W ERB1Q04660 807 aaKnown RBP3.72□□□□□ -1.81
PTM1YKL039W DCS1Q06151 350 aa3.72□□□□□ -1.81
PTM1YKL039W SRL2Q12020 392 aa3.72□□□□□ -1.81
PTM1YKL039W TEL1P38110 2787 aa3.71□□□□□ -1.82
PTM1YKL039W PDX1P16451 410 aa3.71□□□□□ -1.82
PTM1YKL039W POT1P27796 417 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82not detected
PTM1YKL039W NIP1P32497 812 aaKnown RBP3.71□□□□□ -1.82
PTM1YKL039W MNS1P32906 549 aa3.71□□□□□ -1.82
PTM1YKL039W MPE1P35728 441 aaKnown RBP3.71□□□□□ -1.82
PTM1YKL039W OCA2P53949 197 aa3.71□□□□□ -1.82
PTM1YKL039W MMR1Q06324 491 aa3.71□□□□□ -1.82
PTM1YKL039W RPS19AP07280 144 aaKnown RBP3.7□□□□□ -1.82
PTM1YKL039W RPS19BP07281 144 aaPredicted RBP3.7□□□□□ -1.82
PTM1YKL039W POX1P13711 748 aa3.7□□□□□ -1.82
PTM1YKL039W SNA3P14359 133 aa3.7□□□□□ -1.82
PTM1YKL039W SPO7P18410 259 aa3.7□□□□□ -1.82
PTM1YKL039W RVS161P25343 265 aaKnown RBP3.7□□□□□ -1.82
PTM1YKL039W BRF1P29056 596 aa3.7□□□□□ -1.82
PTM1YKL039W DSN1P40568 576 aa3.7□□□□□ -1.82
PTM1YKL039W OAZ1Q02803 292 aa3.7□□□□□ -1.82
PTM1YKL039W YMR130WQ04223 302 aa3.7□□□□□ -1.82
PTM1YKL039W COX3P00420 269 aa3.69□□□□□ -1.82
PTM1YKL039W TPM1P17536 199 aaKnown RBP3.69□□□□□ -1.82
PTM1YKL039W ERV1P27882 189 aa3.69□□□□□ -1.82
PTM1YKL039W POP5P28005 173 aa3.69□□□□□ -1.82
PTM1YKL039W SLM4P38247 162 aa3.69□□□□□ -1.82
PTM1YKL039W RRT2P38332 387 aa3.69□□□□□ -1.82
PTM1YKL039W PES4P39684 611 aa3.69□□□□□ -1.82
PTM1YKL039W JLP2P40206 208 aa3.69□□□□□ -1.82
PTM1YKL039W CAK1P43568 368 aaPredicted RBP3.69□□□□□ -1.82
PTM1YKL039W TIS11P47977 285 aa3.69□□□□□ -1.82
PTM1YKL039W RHO5P53879 331 aaKnown RBP3.69□□□□□ -1.82
PTM1YKL039W YLR152CP54072 576 aa3.69□□□□□ -1.82
PTM1YKL039W BCH1Q05029 724 aa3.69□□□□□ -1.82
PTM1YKL039W ADE4P04046 510 aaKnown RBP3.68□□□□□ -1.82
PTM1YKL039W IMA3P0CW40 589 aa3.68□□□□□ -1.82
PTM1YKL039W IMA4P0CW41 589 aa3.68□□□□□ -1.82
PTM1YKL039W TFB1P32776 642 aa3.68□□□□□ -1.82
PTM1YKL039W SFH5P47008 294 aa3.68□□□□□ -1.82
PTM1YKL039W TOM22P49334 152 aa3.68□□□□□ -1.82
PTM1YKL039W CSI1Q04368 295 aa3.68□□□□□ -1.82
PTM1YKL039W SNT309Q06091 175 aaPredicted RBP3.68□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms