RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W TPS1Q00764 495 aaKnown RBP8.91□□□□□ -0.98
SED1YDR077W MFB1Q04922 465 aa8.91□□□□□ -0.98
SED1YDR077W GIC2Q06648 383 aa8.91□□□□□ -0.98
SED1YDR077W YLR030WQ07967 263 aa8.91□□□□□ -0.98
SED1YDR077W RKM5Q12367 367 aa8.91□□□□□ -0.98
SED1YDR077W YPL119C-AQ3E751 87 aa8.91□□□□□ -0.98
SED1YDR077W BUD5P25300 642 aaPredicted RBP8.9□□□□□ -0.98
SED1YDR077W ARE1P25628 610 aa8.9□□□□□ -0.98
SED1YDR077W CMK1P27466 446 aaKnown RBP8.9□□□□□ -0.98
SED1YDR077W YRO2P38079 344 aa8.9□□□□□ -0.98
SED1YDR077W SOP4P39543 234 aaPredicted RBP8.9□□□□□ -0.98
SED1YDR077W ISC1P40015 477 aaKnown RBP8.9□□□□□ -0.98
SED1YDR077W AVT6P40074 448 aa8.9□□□□□ -0.98
SED1YDR077W RIM21P48565 533 aa8.9□□□□□ -0.98
SED1YDR077W ROM1P53046 1155 aa8.9□□□□□ -0.98
SED1YDR077W SNF12P53628 566 aa8.9□□□□□ -0.98
SED1YDR077W REC102Q02721 264 aa8.9□□□□□ -0.98
SED1YDR077W RSF1Q05043 376 aa8.9□□□□□ -0.98
SED1YDR077W RSA3Q05942 220 aaKnown RBP8.9□□□□□ -0.98
SED1YDR077W YPL066WQ12194 479 aa8.9□□□□□ -0.98
SED1YDR077W THR1P17423 357 aaKnown RBP8.89□□□□□ -0.99
SED1YDR077W DPB2P24482 689 aaPredicted RBP8.89□□□□□ -0.99
SED1YDR077W KRE29P40026 464 aa8.89□□□□□ -0.99
SED1YDR077W YTA6P40328 754 aa8.89□□□□□ -0.99
SED1YDR077W TIM54P47045 478 aa8.89□□□□□ -0.99
SED1YDR077W PRP3Q03338 469 aaPredicted RBP8.89□□□□□ -0.99
SED1YDR077W YMD8Q03697 442 aa8.89□□□□□ -0.99
SED1YDR077W HER1Q12276 1246 aa8.89□□□□□ -0.99
SED1YDR077W PST2Q12335 198 aaKnown RBP8.89□□□□□ -0.99
SED1YDR077W TRM10Q12400 293 aa8.89□□□□□ -0.99
SED1YDR077W MET17P06106 444 aa8.88□□□□□ -0.99
SED1YDR077W SIR3P06701 978 aa8.88□□□□□ -0.99
SED1YDR077W RPL1AP0CX43 217 aaKnown RBP8.88□□□□□ -0.99
SED1YDR077W RPL1BP0CX44 217 aaKnown RBP8.88□□□□□ -0.99
SED1YDR077W CBS1P14066 229 aa8.88□□□□□ -0.99
SED1YDR077W TFS1P14306 219 aa8.88□□□□□ -0.99
SED1YDR077W SNF5P18480 905 aa8.88□□□□□ -0.99
SED1YDR077W VPS51P36116 164 aa8.88□□□□□ -0.99
SED1YDR077W TRR2P38816 342 aa8.88□□□□□ -0.99
SED1YDR077W CTF8P38877 133 aa8.88□□□□□ -0.99
SED1YDR077W IPT1P38954 527 aa8.88□□□□□ -0.99
SED1YDR077W RRG9P40156 214 aa8.88□□□□□ -0.99
SED1YDR077W SOK1P40317 901 aa8.88□□□□□ -0.99
SED1YDR077W SWP82P43554 623 aa8.88□□□□□ -0.99
SED1YDR077W NUP57P48837 541 aa8.88□□□□□ -0.99
SED1YDR077W SHE4P51534 789 aa8.88□□□□□ -0.99
SED1YDR077W YGR012WP53206 393 aa8.88□□□□□ -0.99
SED1YDR077W MTQ1P53944 314 aa8.88□□□□□ -0.99
SED1YDR077W YSA1Q01976 231 aa8.88□□□□□ -0.99
SED1YDR077W ARP10Q04549 284 aa8.88□□□□□ -0.99
SED1YDR077W NAT4Q04751 285 aa8.88□□□□□ -0.99
SED1YDR077W RNH202Q05635 350 aa8.88□□□□□ -0.99
SED1YDR077W DIC1Q06143 298 aa8.88□□□□□ -0.99
SED1YDR077W VPS36Q06696 566 aa8.88□□□□□ -0.99
SED1YDR077W RPC40P07703 335 aaKnown RBP8.87□□□□□ -0.99
SED1YDR077W AAC3P18238 307 aa8.87□□□□□ -0.99
SED1YDR077W ZUO1P32527 433 aaKnown RBP8.87□□□□□ -0.99
SED1YDR077W AUR1P36107 401 aaPredicted RBP8.87□□□□□ -0.99
SED1YDR077W ECM4P36156 370 aa8.87□□□□□ -0.99
SED1YDR077W IRC5P43610 853 aa8.87□□□□□ -0.99
SED1YDR077W NQM1P53228 333 aaPredicted RBP8.87□□□□□ -0.99
SED1YDR077W ERG13P54839 491 aaKnown RBP8.87□□□□□ -0.99
SED1YDR077W SRL4Q03085 281 aa8.87□□□□□ -0.99
SED1YDR077W YLR345WQ06137 509 aa8.87□□□□□ -0.99
SED1YDR077W YPR091CQ06833 770 aa8.87□□□□□ -0.99
SED1YDR077W MOD5P07884 428 aa8.86□□□□□ -0.99
SED1YDR077W SAM35P14693 329 aa8.86□□□□□ -0.99
SED1YDR077W CHA1P25379 360 aaKnown RBP8.86□□□□□ -0.99
SED1YDR077W IMG1P25626 169 aa8.86□□□□□ -0.99
SED1YDR077W YOR062CP36025 268 aa8.86□□□□□ -0.99
SED1YDR077W BET3P36149 193 aa8.86□□□□□ -0.99
SED1YDR077W TAT2P38967 592 aa8.86□□□□□ -0.99
SED1YDR077W AST2P39945 430 aaKnown RBP8.86□□□□□ -0.99
SED1YDR077W GCN20P43535 752 aaKnown RBP8.86□□□□□ -0.99
SED1YDR077W SYF2P53277 215 aaPredicted RBP8.86□□□□□ -0.99
SED1YDR077W ABZ2Q03266 374 aa8.86□□□□□ -0.99
SED1YDR077W YGK3Q12222 375 aaPredicted RBP8.86□□□□□ -0.99
SED1YDR077W YOR214CQ12282 236 aa8.86□□□□□ -0.99
SED1YDR077W RPS21BQ3E754 87 aaKnown RBP8.86□□□□□ -0.99
SED1YDR077W YOL163WP0CF20 169 aa8.85□□□□□ -0.99
SED1YDR077W IDP1P21954 428 aaKnown RBP8.85□□□□□ -0.99
SED1YDR077W HIR2P32480 875 aa8.85□□□□□ -0.99
SED1YDR077W PRP19P32523 503 aaKnown RBP8.85□□□□□ -0.99
SED1YDR077W MAE1P36013 669 aaKnown RBP8.85□□□□□ -0.99
SED1YDR077W MRPL15P36523 253 aa8.85□□□□□ -0.99
SED1YDR077W SBE22P38814 852 aa8.85□□□□□ -0.99
SED1YDR077W GIP2P40036 548 aa8.85□□□□□ -0.99
SED1YDR077W RET2P43621 546 aa8.85□□□□□ -0.99
SED1YDR077W IMD4P50094 524 aaKnown RBP8.85□□□□□ -0.99
SED1YDR077W MPC1P53157 130 aaKnown RBP8.85□□□□□ -0.99
SED1YDR077W MEP3P53390 489 aa8.85□□□□□ -0.99
SED1YDR077W FMP42Q04991 504 aa8.85□□□□□ -0.99
SED1YDR077W NEJ1Q06148 342 aa8.85□□□□□ -0.99
SED1YDR077W OPT2Q06593 877 aa8.85□□□□□ -0.99
SED1YDR077W MCM21Q06675 368 aa8.85□□□□□ -0.99
SED1YDR077W SKM1Q12469 655 aa8.85□□□□□ -0.99
SED1YDR077W FMP27Q06179 2628 aa8.85□□□□□ -0.99
SED1YDR077W REP1P03871 373 aa8.84□□□□□ -0.99
SED1YDR077W YCK1P23291 538 aa8.84□□□□□ -0.99
SED1YDR077W PTR2P32901 601 aa8.84□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms