RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C YJL068CP40363 299 aa6.5□□□□□ -1.37
TDP1YBR223C IRC7P43623 340 aa6.5□□□□□ -1.37
TDP1YBR223C RAD17P48581 401 aa6.5□□□□□ -1.37
TDP1YBR223C MRH4P53166 561 aa6.5□□□□□ -1.37
TDP1YBR223C CSL4P53859 292 aaPredicted RBP6.5□□□□□ -1.37
TDP1YBR223C FDC1Q03034 503 aa6.5□□□□□ -1.37
TDP1YBR223C YLR346CQ06139 101 aa6.5□□□□□ -1.37
TDP1YBR223C YOR238WQ08634 303 aa6.5□□□□□ -1.37
TDP1YBR223C VPS68Q12016 184 aa6.5□□□□□ -1.37
TDP1YBR223C YDR061WQ12298 539 aa6.5□□□□□ -1.37
TDP1YBR223C COX3P00420 269 aa6.5□□□□□ -1.37
TDP1YBR223C TAH1P25638 111 aaPredicted RBP6.5□□□□□ -1.37
TDP1YBR223C CLG1P35190 452 aa6.5□□□□□ -1.37
TDP1YBR223C TEF4P36008 412 aaKnown RBP6.5□□□□□ -1.37
TDP1YBR223C RSM22P36056 628 aa6.5□□□□□ -1.37
TDP1YBR223C YRO2P38079 344 aa6.5□□□□□ -1.37
TDP1YBR223C BNA4P38169 460 aa6.5□□□□□ -1.37
TDP1YBR223C YJL218WP40892 196 aaKnown RBP6.5□□□□□ -1.37
TDP1YBR223C SNM1P40993 198 aa6.5□□□□□ -1.37
TDP1YBR223C CHA4P43634 648 aa6.5□□□□□ -1.37
TDP1YBR223C YJR098CP47139 656 aa6.5□□□□□ -1.37
TDP1YBR223C MTO1P53070 669 aa6.5□□□□□ -1.37
TDP1YBR223C ERG26P53199 349 aaKnown RBP6.5□□□□□ -1.37
TDP1YBR223C MKC7P53379 596 aa6.5□□□□□ -1.37
TDP1YBR223C YAT1P80235 687 aa6.5□□□□□ -1.37
TDP1YBR223C ROT1Q03691 256 aa6.5□□□□□ -1.37
TDP1YBR223C ROY1Q04847 553 aa6.5□□□□□ -1.37
TDP1YBR223C VID22Q05934 901 aa6.5□□□□□ -1.37
TDP1YBR223C EAF1Q06337 982 aa6.5□□□□□ -1.37
TDP1YBR223C VPS36Q06696 566 aa6.5□□□□□ -1.37
TDP1YBR223C PLB3Q08108 686 aa6.5□□□□□ -1.37
TDP1YBR223C YPL199CQ08954 240 aa6.5□□□□□ -1.37
TDP1YBR223C YOR114WQ12219 294 aa6.5□□□□□ -1.37
TDP1YBR223C TRM7P38238 310 aaKnown RBP6.49□□□□□ -1.37
TDP1YBR223C MBA1P38300 278 aa6.49□□□□□ -1.37
TDP1YBR223C AIM10P39965 576 aaKnown RBP6.49□□□□□ -1.37
TDP1YBR223C MNT3P40549 630 aa6.49□□□□□ -1.37
TDP1YBR223C YAE1P47118 141 aaPredicted RBP6.49□□□□□ -1.37
TDP1YBR223C EXG2P52911 562 aa6.49□□□□□ -1.37
TDP1YBR223C SYF2P53277 215 aaPredicted RBP6.49□□□□□ -1.37
TDP1YBR223C DBP6P53734 629 aaKnown RBP6.49□□□□□ -1.37
TDP1YBR223C COS1P53822 381 aa6.49□□□□□ -1.37
TDP1YBR223C AQR1P53943 586 aa6.49□□□□□ -1.37
TDP1YBR223C NOG1Q02892 647 aaKnown RBP6.49□□□□□ -1.37
TDP1YBR223C PFA5Q03289 374 aa6.49□□□□□ -1.37
TDP1YBR223C RGC1Q06108 1083 aaKnown RBP6.49□□□□□ -1.37
TDP1YBR223C RRP40Q08285 240 aaKnown RBP6.49□□□□□ -1.37
TDP1YBR223C TFB4Q12004 338 aa6.49□□□□□ -1.37
TDP1YBR223C SKS1Q12505 502 aa6.49□□□□□ -1.37
TDP1YBR223C HRP1Q99383 534 aaKnown RBP6.49□□□□□ -1.37
TDP1YBR223C Q0182Q9ZZW1 134 aa6.49□□□□□ -1.37
TDP1YBR223C STT4P37297 1900 aa6.49□□□□□ -1.37
TDP1YBR223C SPT15P13393 240 aaKnown RBP6.48□□□□□ -1.37
TDP1YBR223C SEC2P17065 759 aa6.48□□□□□ -1.37
TDP1YBR223C SNF6P18888 332 aa6.48□□□□□ -1.37
TDP1YBR223C SAR1P20606 190 aaKnown RBP6.48□□□□□ -1.37
TDP1YBR223C ADE1P27616 306 aa6.48□□□□□ -1.37
TDP1YBR223C YJU2P28320 278 aaPredicted RBP6.48□□□□□ -1.37
TDP1YBR223C NTH1P32356 751 aa6.48□□□□□ -1.37
TDP1YBR223C SEC61P32915 480 aa6.48□□□□□ -1.37
TDP1YBR223C UTP30P36144 274 aaKnown RBP6.48□□□□□ -1.37
TDP1YBR223C PIM1P36775 1133 aa6.48□□□□□ -1.37
TDP1YBR223C ASC1P38011 319 aaKnown RBP6.48□□□□□ -1.37
TDP1YBR223C YBR063CP38083 404 aa6.48□□□□□ -1.37
TDP1YBR223C DED81P38707 554 aaKnown RBP6.48□□□□□ -1.37
TDP1YBR223C RGA1P39083 1007 aa6.48□□□□□ -1.37
TDP1YBR223C FMC1P40491 155 aa6.48□□□□□ -1.37
TDP1YBR223C YKE4P40544 346 aa6.48□□□□□ -1.37
TDP1YBR223C PAC11P40960 533 aa6.48□□□□□ -1.37
TDP1YBR223C FET5P43561 622 aa6.48□□□□□ -1.37
TDP1YBR223C BPL1P48445 690 aaPredicted RBP6.48□□□□□ -1.37
TDP1YBR223C NUP57P48837 541 aa6.48□□□□□ -1.37
TDP1YBR223C NPY1P53164 384 aa6.48□□□□□ -1.37
TDP1YBR223C MEP3P53390 489 aa6.48□□□□□ -1.37
TDP1YBR223C MTQ1P53944 314 aa6.48□□□□□ -1.37
TDP1YBR223C YHM2Q04013 314 aa6.48□□□□□ -1.37
TDP1YBR223C YPQ2Q06328 317 aa6.48□□□□□ -1.37
TDP1YBR223C YLR040CQ07988 224 aa6.48□□□□□ -1.37
TDP1YBR223C RAD59Q12223 238 aa6.48□□□□□ -1.37
TDP1YBR223C LSO1Q3E827 93 aa6.48□□□□□ -1.37
TDP1YBR223C PNO1Q99216 274 aaKnown RBP6.48□□□□□ -1.37
TDP1YBR223C INH1P01097 85 aa6.47□□□□□ -1.37
TDP1YBR223C CAR2P07991 424 aaKnown RBP6.47□□□□□ -1.37
TDP1YBR223C CMP2P14747 604 aa6.47□□□□□ -1.37
TDP1YBR223C FPR1P20081 114 aaKnown RBP6.47□□□□□ -1.37
TDP1YBR223C NEM1P38757 446 aa6.47□□□□□ -1.37
TDP1YBR223C GDS1P41913 522 aa6.47□□□□□ -1.37
TDP1YBR223C ATG18P43601 500 aa6.47□□□□□ -1.37
TDP1YBR223C IRC18P47056 224 aa6.47□□□□□ -1.37
TDP1YBR223C UBC9P50623 157 aaPredicted RBP6.47□□□□□ -1.37
TDP1YBR223C VPS73P53142 486 aaKnown RBP6.47□□□□□ -1.37
TDP1YBR223C ATF2P53296 535 aa6.47□□□□□ -1.37
TDP1YBR223C RRN9P53437 365 aa6.47□□□□□ -1.37
TDP1YBR223C MRPL50P53724 139 aa6.47□□□□□ -1.37
TDP1YBR223C CTK1Q03957 528 aaKnown RBP6.47□□□□□ -1.37
TDP1YBR223C RQC1Q05468 723 aaKnown RBP6.47□□□□□ -1.37
TDP1YBR223C YLR173WQ06247 608 aa6.47□□□□□ -1.37
TDP1YBR223C GPN3Q06543 272 aa6.47□□□□□ -1.37
TDP1YBR223C RRG7Q08774 242 aaPredicted RBP6.47□□□□□ -1.37
TDP1YBR223C YPR1Q12458 312 aa6.47□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms