RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C YLL067W-AP0CY01 160 aa3.98□□□□□ -1.77
NPL4YBR170C SAR1P20606 190 aaKnown RBP3.98□□□□□ -1.77
NPL4YBR170C PAD1P33751 242 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
NPL4YBR170C SKT5P34226 696 aa3.98□□□□□ -1.77
NPL4YBR170C MST28P39552 234 aa3.98□□□□□ -1.77
NPL4YBR170C YMR134WP40207 237 aa3.98□□□□□ -1.77
NPL4YBR170C AGX1P43567 385 aa3.98□□□□□ -1.77
NPL4YBR170C NUP84P52891 726 aa3.98□□□□□ -1.77
NPL4YBR170C MND1P53102 219 aa3.98□□□□□ -1.77
NPL4YBR170C LDB17Q12342 491 aa3.98□□□□□ -1.77
NPL4YBR170C NCA2Q12374 616 aa3.98□□□□□ -1.77
NPL4YBR170C CSR2Q12734 1121 aa3.98□□□□□ -1.77
NPL4YBR170C YOR338WQ99326 363 aa3.98□□□□□ -1.77
NPL4YBR170C MEK1P24719 497 aaPredicted RBP3.98□□□□□ -1.77
NPL4YBR170C YUR1P26725 428 aa3.98□□□□□ -1.77
NPL4YBR170C ZUO1P32527 433 aaKnown RBP3.98□□□□□ -1.77
NPL4YBR170C VAM7P32912 316 aa3.98□□□□□ -1.77
NPL4YBR170C RPT5P33297 434 aaKnown RBP3.98□□□□□ -1.77
NPL4YBR170C MRPL37P36532 105 aa3.98□□□□□ -1.77
NPL4YBR170C SPT8P38915 602 aa3.98□□□□□ -1.77
NPL4YBR170C SSN8P47821 323 aa3.98□□□□□ -1.77
NPL4YBR170C POP6P53218 158 aa3.98□□□□□ -1.77
NPL4YBR170C YGR117CP53270 476 aa3.98□□□□□ -1.77
NPL4YBR170C APC4Q04601 652 aa3.98□□□□□ -1.77
NPL4YBR170C MUM3Q08750 479 aa3.98□□□□□ -1.77
NPL4YBR170C TPT1Q12272 230 aaKnown RBP3.98□□□□□ -1.77
NPL4YBR170C YOP1Q12402 180 aa3.98□□□□□ -1.77
NPL4YBR170C CAR2P07991 424 aaKnown RBP3.97□□□□□ -1.77
NPL4YBR170C SSA3P09435 649 aaKnown RBP3.97□□□□□ -1.77
NPL4YBR170C MXR2P25566 168 aa3.97□□□□□ -1.77
NPL4YBR170C YCL068CP25593 260 aa3.97□□□□□ -1.77
NPL4YBR170C CIN8P27895 1000 aa3.97□□□□□ -1.77
NPL4YBR170C RAD23P32628 398 aaKnown RBP3.97□□□□□ -1.77
NPL4YBR170C YIR016WP40572 265 aa3.97□□□□□ -1.77
NPL4YBR170C MDV1P47025 714 aa3.97□□□□□ -1.77
NPL4YBR170C RPM2Q02773 1202 aa3.97□□□□□ -1.77
NPL4YBR170C RIM13Q03792 727 aa3.97□□□□□ -1.77
NPL4YBR170C YOL075CQ08234 1294 aa3.97□□□□□ -1.77
NPL4YBR170C SAM2P19358 384 aaKnown RBP3.96□□□□□ -1.78
NPL4YBR170C TPO5P36029 618 aa3.96□□□□□ -1.78
NPL4YBR170C SHO1P40073 367 aa3.96□□□□□ -1.78
NPL4YBR170C XBP1P40489 647 aa3.96□□□□□ -1.78
NPL4YBR170C IKS1P47042 667 aa3.96□□□□□ -1.78
NPL4YBR170C LOH1P47055 219 aa3.96□□□□□ -1.78
NPL4YBR170C AZR1P50080 613 aa3.96□□□□□ -1.78
NPL4YBR170C MPP6P53725 186 aaPredicted RBP3.96□□□□□ -1.78
NPL4YBR170C SPR6Q01684 191 aa3.96□□□□□ -1.78
NPL4YBR170C RGS2Q99188 309 aa3.96□□□□□ -1.78
NPL4YBR170C TDH1P00360 332 aaKnown RBP3.95□□□□□ -1.78
NPL4YBR170C MRPS5P33759 307 aa3.95□□□□□ -1.78
NPL4YBR170C KKQ8P36004 724 aa3.95□□□□□ -1.78
NPL4YBR170C SFH5P47008 294 aa3.95□□□□□ -1.78
NPL4YBR170C EMC2P47133 292 aaKnown RBP3.95□□□□□ -1.78
NPL4YBR170C CSI1Q04368 295 aa3.95□□□□□ -1.78
NPL4YBR170C NAT4Q04751 285 aa3.95□□□□□ -1.78
NPL4YBR170C PAB1P04147 577 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
NPL4YBR170C SSC1P0CS90 654 aaKnown RBP3.95□□□□□ -1.78
NPL4YBR170C UNG1P12887 359 aa3.95□□□□□ -1.78
NPL4YBR170C MRPL8P22353 238 aa3.95□□□□□ -1.78
NPL4YBR170C YEF1P32622 495 aa3.95□□□□□ -1.78
NPL4YBR170C PTR2P32901 601 aa3.95□□□□□ -1.78
NPL4YBR170C MNS1P32906 549 aa3.95□□□□□ -1.78
NPL4YBR170C MCR1P36060 302 aaKnown RBP3.95□□□□□ -1.78
NPL4YBR170C PEX32P38292 413 aa3.95□□□□□ -1.78
NPL4YBR170C FET3P38993 636 aa3.95□□□□□ -1.78
NPL4YBR170C FAA2P39518 744 aa3.95□□□□□ -1.78
NPL4YBR170C BTT1P40314 149 aaPredicted RBP3.95□□□□□ -1.78
NPL4YBR170C SEC9P40357 651 aa3.95□□□□□ -1.78
NPL4YBR170C UTP25P40498 721 aaKnown RBP3.95□□□□□ -1.78
NPL4YBR170C DIM1P41819 318 aaKnown RBP3.95□□□□□ -1.78
NPL4YBR170C PIR3Q03180 325 aa3.95□□□□□ -1.78
NPL4YBR170C YMR181CQ03231 154 aa3.95□□□□□ -1.78
NPL4YBR170C THI7Q05998 598 aa3.95□□□□□ -1.78
NPL4YBR170C DNL4Q08387 944 aaPredicted RBP3.95□□□□□ -1.78
NPL4YBR170C APC5Q08683 685 aa3.95□□□□□ -1.78
NPL4YBR170C APC2Q12440 853 aa3.95□□□□□ -1.78
NPL4YBR170C POM152P39685 1337 aa3.94□□□□□ -1.78
NPL4YBR170C CAP2P13517 287 aa3.94□□□□□ -1.78
NPL4YBR170C FAR1P21268 830 aa3.94□□□□□ -1.78
NPL4YBR170C UTR1P21373 530 aa3.94□□□□□ -1.78
NPL4YBR170C SLY1P22213 666 aa3.94□□□□□ -1.78
NPL4YBR170C EXG1P23776 448 aaKnown RBP3.94□□□□□ -1.78
NPL4YBR170C HXT1P32465 570 aa3.94□□□□□ -1.78
NPL4YBR170C NDC1P32500 655 aa3.94□□□□□ -1.78
NPL4YBR170C RPC25P35718 212 aa3.94□□□□□ -1.78
NPL4YBR170C GPX2P38143 162 aa3.94□□□□□ -1.78
NPL4YBR170C SCC4P40090 624 aa3.94□□□□□ -1.78
NPL4YBR170C YIL152WP40455 235 aa3.94□□□□□ -1.78
NPL4YBR170C ABM1P47146 123 aa3.94□□□□□ -1.78
NPL4YBR170C COS1P53822 381 aa3.94□□□□□ -1.78
NPL4YBR170C DIG1Q03063 452 aaKnown RBP3.94□□□□□ -1.78
NPL4YBR170C CCE1Q03702 353 aa3.94□□□□□ -1.78
NPL4YBR170C BCH1Q05029 724 aa3.94□□□□□ -1.78
NPL4YBR170C BUR2Q05949 395 aa3.94□□□□□ -1.78
NPL4YBR170C YLL007CQ07799 665 aa3.94□□□□□ -1.78
NPL4YBR170C DSE3Q08729 430 aa3.94□□□□□ -1.78
NPL4YBR170C RAX1Q08760 435 aa3.94□□□□□ -1.78
NPL4YBR170C YPL199CQ08954 240 aa3.94□□□□□ -1.78
NPL4YBR170C SGT2Q12118 346 aaKnown RBP3.94□□□□□ -1.78
NPL4YBR170C GDH1P07262 454 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 68.9 ms