RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeastyeast

Gene PKR1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PKR1YMR123W AHC1Q12433 566 aa2.16□□□□□ -2.06
PKR1YMR123W ISN1Q99312 450 aa2.16□□□□□ -2.06
PKR1YMR123W YOR093CQ12275 1648 aa2.16□□□□□ -2.06
PKR1YMR123W STU1P38198 1513 aa2.16□□□□□ -2.06
PKR1YMR123W TY1B-HO13535 1793 aa2.15□□□□□ -2.06
PKR1YMR123W TY1B-DR5P0C2I2 1755 aa2.15□□□□□ -2.06
PKR1YMR123W TY1B-DR6P0C2I3 1755 aa2.15□□□□□ -2.06
PKR1YMR123W TY1B-LR2P0C2I5 1755 aa2.15□□□□□ -2.06
PKR1YMR123W TY1B-LR3P0C2I6 1755 aaKnown RBP2.15□□□□□ -2.06
PKR1YMR123W TY1B-PR1P0C2I9 1755 aaKnown RBP2.15□□□□□ -2.06
PKR1YMR123W TY1B-PR2P0C2J0 1756 aa2.15□□□□□ -2.06
PKR1YMR123W TY1B-PR3P0C2J1 1755 aaKnown RBP2.15□□□□□ -2.06
PKR1YMR123W TY1B-JR1P47098 1755 aa2.15□□□□□ -2.06
PKR1YMR123W TY1B-ML2Q03434 1755 aaKnown RBP2.15□□□□□ -2.06
PKR1YMR123W TY1B-ER1Q03612 1755 aa2.15□□□□□ -2.06
PKR1YMR123W TY1B-ML1Q04711 1755 aaKnown RBP2.15□□□□□ -2.06
PKR1YMR123W TY1B-GR2Q12269 1755 aa2.15□□□□□ -2.06
PKR1YMR123W TY1B-OLQ12273 1755 aa2.15□□□□□ -2.06
PKR1YMR123W TY1B-PLQ12414 1755 aaKnown RBP2.15□□□□□ -2.06
PKR1YMR123W TY2B-BQ12491 1770 aa2.15□□□□□ -2.06
PKR1YMR123W MSI1P13712 422 aa2.15□□□□□ -2.07
PKR1YMR123W REC107P21651 314 aa2.15□□□□□ -2.07
PKR1YMR123W AAT2P23542 418 aaKnown RBP2.15□□□□□ -2.07
PKR1YMR123W YCL068CP25593 260 aa2.15□□□□□ -2.07
PKR1YMR123W YCR051WP25631 222 aa2.15□□□□□ -2.07
PKR1YMR123W PRR1P28708 518 aa2.15□□□□□ -2.07
PKR1YMR123W PHA2P32452 334 aa2.15□□□□□ -2.07
PKR1YMR123W SPT10P35208 640 aa2.15□□□□□ -2.07
PKR1YMR123W MMS4P38257 691 aa2.15□□□□□ -2.07
PKR1YMR123W RTC2P38279 296 aa2.15□□□□□ -2.07
PKR1YMR123W COX14P39103 70 aa2.15□□□□□ -2.07
PKR1YMR123W ADA2Q02336 434 aa2.15□□□□□ -2.07
PKR1YMR123W RIF2Q06208 395 aa2.15□□□□□ -2.07
PKR1YMR123W RRP9Q06506 573 aaKnown RBP2.15□□□□□ -2.07
PKR1YMR123W DIS3Q08162 1001 aaKnown RBP2.15□□□□□ -2.07
PKR1YMR123W YGK3Q12222 375 aaPredicted RBP2.15□□□□□ -2.07
PKR1YMR123W SCM3Q12334 223 aa2.15□□□□□ -2.07
PKR1YMR123W YRF1-1P0CX20 1796 aa2.15□□□□□ -2.07
PKR1YMR123W YRF1-5P0CX21 1796 aa2.15□□□□□ -2.07
PKR1YMR123W YRF1-8P0CX22 1796 aa2.15□□□□□ -2.07
PKR1YMR123W TY1B-DR3Q99231 1755 aa2.15□□□□□ -2.07
PKR1YMR123W MYO4P32492 1471 aa2.14□□□□□ -2.07
PKR1YMR123W YRF1-4O13559 1382 aa2.14□□□□□ -2.07
PKR1YMR123W HOM3P10869 527 aa2.14□□□□□ -2.07
PKR1YMR123W URA4P20051 364 aa2.14□□□□□ -2.07
PKR1YMR123W NOC2P39744 710 aaKnown RBP2.14□□□□□ -2.07
PKR1YMR123W LSM5P40089 93 aaKnown RBP2.14□□□□□ -2.07
PKR1YMR123W YFR057WP43625 151 aa2.14□□□□□ -2.07
PKR1YMR123W YGR250CP53316 781 aaKnown RBP2.14□□□□□ -2.07
PKR1YMR123W APJ1P53940 528 aa2.14□□□□□ -2.07
PKR1YMR123W MDM1Q01846 1127 aa2.14□□□□□ -2.07
PKR1YMR123W VPS72Q03388 795 aa2.14□□□□□ -2.07
PKR1YMR123W DCS1Q06151 350 aa2.14□□□□□ -2.07
PKR1YMR123W MDM36Q06820 579 aa2.14□□□□□ -2.07
PKR1YMR123W CMS1Q07897 291 aaKnown RBP2.14□□□□□ -2.07
PKR1YMR123W SMF3Q12078 473 aaPredicted RBP2.14□□□□□ -2.07
PKR1YMR123W YBL111CQ3E7Y5 667 aa2.14□□□□□ -2.07
PKR1YMR123W ADE4P04046 510 aaKnown RBP2.13□□□□□ -2.07
PKR1YMR123W IMA3P0CW40 589 aa2.13□□□□□ -2.07
PKR1YMR123W IMA4P0CW41 589 aa2.13□□□□□ -2.07
PKR1YMR123W BRF1P29056 596 aa2.13□□□□□ -2.07
PKR1YMR123W YBR056WP38081 501 aa2.13□□□□□ -2.07
PKR1YMR123W SLX1P38324 304 aa2.13□□□□□ -2.07
PKR1YMR123W NAB3P38996 802 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
PKR1YMR123W YPS6P40583 537 aa2.13□□□□□ -2.07
PKR1YMR123W GPD2P41911 440 aaKnown RBP2.13□□□□□ -2.07
PKR1YMR123W BIR1P47134 954 aa2.13□□□□□ -2.07
PKR1YMR123W SRB7P47822 140 aa2.13□□□□□ -2.07
PKR1YMR123W MRM2P53123 320 aa2.13□□□□□ -2.07
PKR1YMR123W MST27P53176 234 aa2.13□□□□□ -2.07
PKR1YMR123W CCE1Q03702 353 aa2.13□□□□□ -2.07
PKR1YMR123W YMR130WQ04223 302 aa2.13□□□□□ -2.07
PKR1YMR123W RTN1Q04947 295 aaKnown RBP2.13□□□□□ -2.07
PKR1YMR123W SNT309Q06091 175 aaPredicted RBP2.13□□□□□ -2.07
PKR1YMR123W IMA2Q08295 589 aa2.13□□□□□ -2.07
PKR1YMR123W MED2Q12124 431 aa2.13□□□□□ -2.07
PKR1YMR123W SNT2P53127 1403 aa2.13□□□□□ -2.07
PKR1YMR123W TRM3Q07527 1436 aa2.13□□□□□ -2.07
PKR1YMR123W RPO21P04050 1733 aaKnown RBP2.13□□□□□ -2.07
PKR1YMR123W ULS1Q08562 1619 aa2.13□□□□□ -2.07
PKR1YMR123W SPO14P36126 1683 aa2.12□□□□□ -2.07
PKR1YMR123W SNQ2P32568 1501 aaKnown RBP2.12□□□□□ -2.07
PKR1YMR123W TY1B-AO13527 1196 aaKnown RBP2.12□□□□□ -2.07
PKR1YMR123W COX3P00420 269 aa2.12□□□□□ -2.07
PKR1YMR123W ATP3P38077 311 aaKnown RBP2.12□□□□□ -2.07
PKR1YMR123W BAT1P38891 393 aaKnown RBP2.12□□□□□ -2.07
PKR1YMR123W OXA1P39952 402 aa2.12□□□□□ -2.07
PKR1YMR123W SIM1P40472 476 aa2.12□□□□□ -2.07
PKR1YMR123W TOM22P49334 152 aa2.12□□□□□ -2.07
PKR1YMR123W BNS1P50084 137 aa2.12□□□□□ -2.07
PKR1YMR123W RPT4P53549 437 aaKnown RBP2.12□□□□□ -2.07
PKR1YMR123W RNY1Q02933 434 aaKnown RBP2.12□□□□□ -2.07
PKR1YMR123W ACL4Q03771 387 aa2.12□□□□□ -2.07
PKR1YMR123W VHS1Q03785 461 aa2.12□□□□□ -2.07
PKR1YMR123W YMR155WQ03795 547 aa2.12□□□□□ -2.07
PKR1YMR123W RPN9Q04062 393 aaKnown RBP2.12□□□□□ -2.07
PKR1YMR123W ROY1Q04847 553 aa2.12□□□□□ -2.07
PKR1YMR123W DOP1Q03921 1698 aa2.12□□□□□ -2.07
PKR1YMR123W TY1B-JR2P47100 1755 aaKnown RBP2.11□□□□□ -2.07
PKR1YMR123W TY1B-ER2Q03619 1755 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms