RNA–Protein interactions for RNA: YHR171W

ATG7, Transcript of Autophagy-related protein and dual specificity member of the E1 family, yeastyeast

Gene ATG7, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG7YHR171W APM1Q00776 475 aaPredicted RBP5.49□□□□□ -1.53
ATG7YHR171W FMP30Q02883 468 aa5.49□□□□□ -1.53
ATG7YHR171W TRS23Q03784 219 aa5.49□□□□□ -1.53
ATG7YHR171W NUP53Q03790 475 aa5.49□□□□□ -1.53
ATG7YHR171W CMS1Q07897 291 aaKnown RBP5.49□□□□□ -1.53
ATG7YHR171W YOR365CQ08844 703 aa5.49□□□□□ -1.53
ATG7YHR171W FSH3Q99369 266 aa5.49□□□□□ -1.53
ATG7YHR171W CDC33P07260 213 aaKnown RBP5.48□□□□□ -1.53
ATG7YHR171W RPL12AP0CX53 165 aaKnown RBP5.48□□□□□ -1.53
ATG7YHR171W RPL12BP0CX54 165 aa5.48□□□□□ -1.53
ATG7YHR171W TCP1P12612 559 aaKnown RBP5.48□□□□□ -1.53
ATG7YHR171W PEX3P28795 441 aa5.48□□□□□ -1.53
ATG7YHR171W CYS4P32582 507 aaKnown RBP5.48□□□□□ -1.53
ATG7YHR171W MSN2P33748 704 aa5.48□□□□□ -1.53
ATG7YHR171W DOA1P36037 715 aa5.48□□□□□ -1.53
ATG7YHR171W PRS4P38063 326 aaPredicted RBP5.48□□□□□ -1.53
ATG7YHR171W RTC3P38804 111 aaPredicted RBP5.48□□□□□ -1.53
ATG7YHR171W PFS1P38872 237 aa5.48□□□□□ -1.53
ATG7YHR171W PYK2P52489 506 aaKnown RBP5.48□□□□□ -1.53
ATG7YHR171W RIM8P53179 542 aa5.48□□□□□ -1.53
ATG7YHR171W YGR067CP53243 804 aa5.48□□□□□ -1.53
ATG7YHR171W EAF7P53911 425 aaKnown RBP5.48□□□□□ -1.53
ATG7YHR171W SAM50P53969 484 aa5.48□□□□□ -1.53
ATG7YHR171W BUR2Q05949 395 aa5.48□□□□□ -1.53
ATG7YHR171W ARO10Q06408 635 aa5.48□□□□□ -1.53
ATG7YHR171W SDO1Q07953 250 aaKnown RBP5.48□□□□□ -1.53
ATG7YHR171W OPI3P05375 206 aa5.47□□□□□ -1.53
ATG7YHR171W RNR3P21672 869 aaKnown RBP5.47□□□□□ -1.53
ATG7YHR171W GCG1P32656 232 aaKnown RBP5.47□□□□□ -1.53
ATG7YHR171W SPT10P35208 640 aa5.47□□□□□ -1.53
ATG7YHR171W BNA4P38169 460 aa5.47□□□□□ -1.53
ATG7YHR171W MMS21P38632 267 aa5.47□□□□□ -1.53
ATG7YHR171W YMR134WP40207 237 aa5.47□□□□□ -1.53
ATG7YHR171W ERG10P41338 398 aaKnown RBP5.47□□□□□ -1.53
ATG7YHR171W UBP8P50102 471 aa5.47□□□□□ -1.53
ATG7YHR171W TRM112P53738 135 aaPredicted RBP5.47□□□□□ -1.53
ATG7YHR171W DIA1P54005 336 aa5.47□□□□□ -1.53
ATG7YHR171W NUP116Q02630 1113 aa5.47□□□□□ -1.53
ATG7YHR171W DSE3Q08729 430 aa5.47□□□□□ -1.53
ATG7YHR171W YDL177CQ12257 170 aa5.47□□□□□ -1.53
ATG7YHR171W YPR1Q12458 312 aa5.47□□□□□ -1.53
ATG7YHR171W RAD52P06778 471 aaKnown RBP5.47□□□□□ -1.53
ATG7YHR171W CKI1P20485 582 aa5.47□□□□□ -1.53
ATG7YHR171W RIB1P38066 345 aa5.47□□□□□ -1.53
ATG7YHR171W TAF6P53040 516 aa5.47□□□□□ -1.53
ATG7YHR171W LIF1P53150 421 aa5.47□□□□□ -1.53
ATG7YHR171W YPR003CP53394 754 aa5.47□□□□□ -1.53
ATG7YHR171W YTP1P53584 459 aa5.47□□□□□ -1.53
ATG7YHR171W GMC2Q06201 188 aa5.47□□□□□ -1.53
ATG7YHR171W RPL35AP0CX84 120 aaKnown RBP5.46□□□□□ -1.54
ATG7YHR171W RPL35BP0CX85 120 aaKnown RBP5.46□□□□□ -1.54
ATG7YHR171W MATALPHA2P0CY08 210 aa5.46□□□□□ -1.54
ATG7YHR171W HMLALPHA2P0CY09 210 aa5.46□□□□□ -1.54
ATG7YHR171W REC114P32841 428 aa5.46□□□□□ -1.54
ATG7YHR171W APL3P38065 1025 aa5.46□□□□□ -1.54
ATG7YHR171W YJL163CP46996 555 aa5.46□□□□□ -1.54
ATG7YHR171W PRY1P47032 299 aa5.46□□□□□ -1.54
ATG7YHR171W STB4P50104 949 aa5.46□□□□□ -1.54
ATG7YHR171W YPL068CQ02749 293 aa5.46□□□□□ -1.54
ATG7YHR171W YMR209CQ03648 457 aa5.46□□□□□ -1.54
ATG7YHR171W DLT1Q04216 342 aa5.46□□□□□ -1.54
ATG7YHR171W HSP31Q04432 237 aa5.46□□□□□ -1.54
ATG7YHR171W BRX1Q08235 291 aaKnown RBP5.46□□□□□ -1.54
ATG7YHR171W VIK1Q12045 647 aa5.46□□□□□ -1.54
ATG7YHR171W MSH5Q12175 901 aa5.46□□□□□ -1.54
ATG7YHR171W FRE7Q12333 620 aa5.46□□□□□ -1.54
ATG7YHR171W ATP1P07251 545 aaKnown RBP5.45□□□□□ -1.54
ATG7YHR171W IMA3P0CW40 589 aa5.45□□□□□ -1.54
ATG7YHR171W IMA4P0CW41 589 aa5.45□□□□□ -1.54
ATG7YHR171W PMA2P19657 947 aa5.45□□□□□ -1.54
ATG7YHR171W ZUO1P32527 433 aaKnown RBP5.45□□□□□ -1.54
ATG7YHR171W PRP18P33411 251 aaPredicted RBP5.45□□□□□ -1.54
ATG7YHR171W BIO4P53630 237 aa5.45□□□□□ -1.54
ATG7YHR171W MMT1Q03218 510 aa5.45□□□□□ -1.54
ATG7YHR171W RIM13Q03792 727 aa5.45□□□□□ -1.54
ATG7YHR171W UBX2Q04228 584 aa5.45□□□□□ -1.54
ATG7YHR171W SPO77Q06134 477 aa5.45□□□□□ -1.54
ATG7YHR171W IMA2Q08295 589 aa5.45□□□□□ -1.54
ATG7YHR171W TYR1P20049 452 aa5.45□□□□□ -1.54
ATG7YHR171W TKL1P23254 680 aaKnown RBP5.45□□□□□ -1.54
ATG7YHR171W YSR3P23501 404 aa5.45□□□□□ -1.54
ATG7YHR171W ATP7P30902 174 aa5.45□□□□□ -1.54
ATG7YHR171W SKT5P34226 696 aa5.45□□□□□ -1.54
ATG7YHR171W HIS2P38635 335 aa5.45□□□□□ -1.54
ATG7YHR171W FMP52P40008 231 aa5.45□□□□□ -1.54
ATG7YHR171W YER079WP40052 210 aaKnown RBP5.45□□□□□ -1.54
ATG7YHR171W BTT1P40314 149 aaPredicted RBP5.45□□□□□ -1.54
ATG7YHR171W SPT20P50875 604 aa5.45□□□□□ -1.54
ATG7YHR171W YGR168CP53293 376 aa5.45□□□□□ -1.54
ATG7YHR171W GIP3Q03016 1276 aa5.45□□□□□ -1.54
ATG7YHR171W RRP17Q04031 235 aaPredicted RBP5.45□□□□□ -1.54
ATG7YHR171W SMP3Q04174 516 aa5.45□□□□□ -1.54
ATG7YHR171W YDR222WQ04925 415 aa5.45□□□□□ -1.54
ATG7YHR171W CDC123Q05791 360 aa5.45□□□□□ -1.54
ATG7YHR171W YLR224WQ05947 369 aa5.45□□□□□ -1.54
ATG7YHR171W SUT2Q12286 268 aa5.45□□□□□ -1.54
ATG7YHR171W TRP4P07285 380 aaPredicted RBP5.44□□□□□ -1.54
ATG7YHR171W MET3P08536 511 aa5.44□□□□□ -1.54
ATG7YHR171W CLN3P13365 580 aa5.44□□□□□ -1.54
ATG7YHR171W RPL24BP24000 155 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms