RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM1YDR120C POP6P53218 158 aa3.87□□□□□ -1.79
TRM1YDR120C PIR3Q03180 325 aa3.87□□□□□ -1.79
TRM1YDR120C MCK1P21965 375 aaKnown RBP3.87□□□□□ -1.79
TRM1YDR120C PCA1P38360 1216 aa3.87□□□□□ -1.79
TRM1YDR120C RRP4P38792 359 aaKnown RBP3.87□□□□□ -1.79
TRM1YDR120C LYS1P38998 373 aaRIP-Chip data3.87□□□□□ -1.79not detected
TRM1YDR120C FRE4P53746 719 aa3.87□□□□□ -1.79
TRM1YDR120C GIP3Q03016 1276 aa3.87□□□□□ -1.79
TRM1YDR120C YLR456WQ06199 204 aa3.87□□□□□ -1.79
TRM1YDR120C YPR022CQ12139 1133 aa3.87□□□□□ -1.79
TRM1YDR120C ILV5P06168 395 aaKnown RBP3.86□□□□□ -1.79
TRM1YDR120C RPL1AP0CX43 217 aaKnown RBP3.86□□□□□ -1.79
TRM1YDR120C RPL1BP0CX44 217 aaKnown RBP3.86□□□□□ -1.79
TRM1YDR120C RRP7P25368 297 aaPredicted RBP3.86□□□□□ -1.79
TRM1YDR120C FAD1P38913 306 aa3.86□□□□□ -1.79
TRM1YDR120C YAL037WP39728 267 aa3.86□□□□□ -1.79
TRM1YDR120C SEC28P40509 296 aaKnown RBP3.86□□□□□ -1.79
TRM1YDR120C YJL213WP40896 331 aa3.86□□□□□ -1.79
TRM1YDR120C YFH7P43591 353 aa3.86□□□□□ -1.79
TRM1YDR120C HMS2P47175 358 aa3.86□□□□□ -1.79
TRM1YDR120C MRP51Q02950 344 aa3.86□□□□□ -1.79
TRM1YDR120C RPN9Q04062 393 aaKnown RBP3.86□□□□□ -1.79
TRM1YDR120C TIP41Q12199 356 aa3.86□□□□□ -1.79
TRM1YDR120C ORT1Q12375 292 aa3.86□□□□□ -1.79
TRM1YDR120C RMD5Q12508 421 aa3.86□□□□□ -1.79
TRM1YDR120C TIP1P27654 210 aaPredicted RBP3.85□□□□□ -1.79
TRM1YDR120C PRO3P32263 286 aaKnown RBP3.85□□□□□ -1.79
TRM1YDR120C SWI3P32591 825 aa3.85□□□□□ -1.79
TRM1YDR120C HEL1P36113 551 aa3.85□□□□□ -1.79
TRM1YDR120C RXT2P38255 430 aa3.85□□□□□ -1.79
TRM1YDR120C YNR048WP53740 393 aa3.85□□□□□ -1.79
TRM1YDR120C CAF40P53829 373 aa3.85□□□□□ -1.79
TRM1YDR120C GPI15P53961 229 aa3.85□□□□□ -1.79
TRM1YDR120C REX4Q08237 289 aa3.85□□□□□ -1.79
TRM1YDR120C SGT1Q08446 395 aa3.85□□□□□ -1.79
TRM1YDR120C SKI7Q08491 747 aaPredicted RBP3.85□□□□□ -1.79
TRM1YDR120C GDH1P07262 454 aaKnown RBP3.84□□□□□ -1.79
TRM1YDR120C PMR1P13586 950 aa3.84□□□□□ -1.79
TRM1YDR120C ITR1P30605 584 aa3.84□□□□□ -1.79
TRM1YDR120C PUP2P32379 260 aa3.84□□□□□ -1.79
TRM1YDR120C FMP46P36141 133 aaKnown RBP3.84□□□□□ -1.79
TRM1YDR120C APE4P38821 490 aa3.84□□□□□ -1.79
TRM1YDR120C MST28P39552 234 aa3.84□□□□□ -1.79
TRM1YDR120C SSN8P47821 323 aa3.84□□□□□ -1.79
TRM1YDR120C PEX25Q02969 394 aa3.84□□□□□ -1.79
TRM1YDR120C YDL144CQ07589 356 aa3.84□□□□□ -1.79
TRM1YDR120C TIM18Q08749 192 aa3.84□□□□□ -1.79
TRM1YDR120C MUM3Q08750 479 aa3.84□□□□□ -1.79
TRM1YDR120C YLL056CQ12177 298 aa3.84□□□□□ -1.79
TRM1YDR120C ARG4P04076 463 aaPredicted RBP3.84□□□□□ -1.8
TRM1YDR120C SAM1P10659 382 aaKnown RBP3.84□□□□□ -1.8
TRM1YDR120C SAM2P19358 384 aaKnown RBP3.84□□□□□ -1.8
TRM1YDR120C LSB5P25369 354 aa3.84□□□□□ -1.8
TRM1YDR120C AGA1P32323 725 aa3.84□□□□□ -1.8
TRM1YDR120C YGL260WP53056 76 aa3.84□□□□□ -1.8
TRM1YDR120C YPL199CQ08954 240 aa3.84□□□□□ -1.8
TRM1YDR120C PPT2Q12036 173 aa3.84□□□□□ -1.8
TRM1YDR120C TY3A-GQ12173 290 aa3.84□□□□□ -1.8
TRM1YDR120C PKH2Q12236 1081 aaKnown RBP3.84□□□□□ -1.8
TRM1YDR120C YBR298C-AQ8TGK4 73 aa3.84□□□□□ -1.8
TRM1YDR120C TY3A-IQ99219 290 aa3.84□□□□□ -1.8
TRM1YDR120C RIM1P32445 135 aaKnown RBP3.83□□□□□ -1.8
TRM1YDR120C OLA1P38219 394 aaKnown RBP3.83□□□□□ -1.8
TRM1YDR120C VAB2P40003 282 aa3.83□□□□□ -1.8
TRM1YDR120C GAT2P40209 560 aa3.83□□□□□ -1.8
TRM1YDR120C YPS6P40583 537 aa3.83□□□□□ -1.8
TRM1YDR120C MEP2P41948 499 aa3.83□□□□□ -1.8
TRM1YDR120C WSC2P53832 503 aa3.83□□□□□ -1.8
TRM1YDR120C RSN1Q03516 953 aa3.83□□□□□ -1.8
TRM1YDR120C YDR341CQ05506 607 aaKnown RBP3.83□□□□□ -1.8
TRM1YDR120C SNT309Q06091 175 aaPredicted RBP3.83□□□□□ -1.8
TRM1YDR120C TEF1P02994 458 aaKnown RBP3.82□□□□□ -1.8
TRM1YDR120C NAT1P12945 854 aaKnown RBP3.82□□□□□ -1.8
TRM1YDR120C PTK1P36002 662 aaPredicted RBP3.82□□□□□ -1.8
TRM1YDR120C STN1P38960 494 aa3.82□□□□□ -1.8
TRM1YDR120C IDP2P41939 412 aa3.82□□□□□ -1.8
TRM1YDR120C URH1Q04179 340 aa3.82□□□□□ -1.8
TRM1YDR120C YMR230W-AQ3E7B5 62 aa3.82□□□□□ -1.8
TRM1YDR120C FLO1P32768 1537 aa3.82□□□□□ -1.8
TRM1YDR120C CHS1P08004 1131 aa3.81□□□□□ -1.8
TRM1YDR120C SPO12P17123 173 aa3.81□□□□□ -1.8
TRM1YDR120C DPH2P32461 534 aa3.81□□□□□ -1.8
TRM1YDR120C YBL028CP38202 106 aa3.81□□□□□ -1.8
TRM1YDR120C LAM5P43560 674 aa3.81□□□□□ -1.8
TRM1YDR120C MSO1P53604 210 aaKnown RBP3.81□□□□□ -1.8
TRM1YDR120C RHO5P53879 331 aaKnown RBP3.81□□□□□ -1.8
TRM1YDR120C BET5Q03630 159 aa3.81□□□□□ -1.8
TRM1YDR120C RUP1Q12242 671 aa3.81□□□□□ -1.8
TRM1YDR120C ATG34Q12292 412 aa3.81□□□□□ -1.8
TRM1YDR120C RAD61Q99359 647 aa3.81□□□□□ -1.8
TRM1YDR120C IMA3P0CW40 589 aa3.81□□□□□ -1.8
TRM1YDR120C IMA4P0CW41 589 aa3.81□□□□□ -1.8
TRM1YDR120C CPR1P14832 162 aaKnown RBP3.81□□□□□ -1.8
TRM1YDR120C PRP16P15938 1071 aaPredicted RBP3.81□□□□□ -1.8
TRM1YDR120C ALG1P16661 449 aa3.81□□□□□ -1.8
TRM1YDR120C RAD57P25301 460 aa3.81□□□□□ -1.8
TRM1YDR120C NAT2P37293 288 aa3.81□□□□□ -1.8
TRM1YDR120C MIX23P38162 196 aa3.81□□□□□ -1.8
TRM1YDR120C MKT1P40850 830 aaKnown RBP3.81□□□□□ -1.8
TRM1YDR120C PHB2P50085 310 aa3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms