RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	YPR091C	Q06833	770 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	MFG1	Q07684	458 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	FMP25	Q08023	583 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	UAF30	Q08747	228 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	SET6	Q12529	373 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	RPC40	P07703	335 aa	Known RBP	3.85	□□□□□ -1.79
VMA1	YDL185W	MET2	P08465	486 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	ZWF1	P11412	505 aa	Known RBP	3.85	□□□□□ -1.79
VMA1	YDL185W	MAS2	P11914	482 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	SAM35	P14693	329 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	PRP2	P20095	876 aa	Predicted RBP	3.85	□□□□□ -1.79
VMA1	YDL185W	UTR1	P21373	530 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	MGR1	P25573	417 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	SRB6	P32570	121 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	AFR1	P33304	620 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	APL3	P38065	1025 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	ERV15	P38312	142 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	RCK1	P38622	512 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	SFB3	P38810	929 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	HPA3	P39979	161 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	NTA1	P40354	457 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	ERG10	P41338	398 aa	Known RBP	3.85	□□□□□ -1.79
VMA1	YDL185W	RPN11	P43588	306 aa	Known RBP	3.85	□□□□□ -1.79
VMA1	YDL185W	BIT61	P47041	543 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	YAE1	P47118	141 aa	Predicted RBP	3.85	□□□□□ -1.79
VMA1	YDL185W	ARH1	P48360	493 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	DOC1	P53068	250 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	ERV25	P54837	211 aa	Known RBP	3.85	□□□□□ -1.79
VMA1	YDL185W	MSS11	Q03825	758 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	PLB3	Q08108	686 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	SCP1	Q08873	200 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	RKM5	Q12367	367 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	PCC1	Q3E833	88 aa		3.85	□□□□□ -1.79
VMA1	YDL185W	HRP1	Q99383	534 aa	Known RBP	3.85	□□□□□ -1.79
VMA1	YDL185W	RPS9A	O13516	197 aa	Known RBP	3.84	□□□□□ -1.79
VMA1	YDL185W	SCM4	P32564	187 aa		3.84	□□□□□ -1.79
VMA1	YDL185W	SPT10	P35208	640 aa		3.84	□□□□□ -1.79
VMA1	YDL185W	RPF2	P36160	344 aa	Known RBP	3.84	□□□□□ -1.79
VMA1	YDL185W	SRP68	P38687	599 aa	Known RBP	3.84	□□□□□ -1.79
VMA1	YDL185W	ATG18	P43601	500 aa		3.84	□□□□□ -1.79
VMA1	YDL185W	RPE1	P46969	238 aa		3.84	□□□□□ -1.79
VMA1	YDL185W	HMS2	P47175	358 aa		3.84	□□□□□ -1.79
VMA1	YDL185W	PRP24	P49960	444 aa	Known RBP	3.84	□□□□□ -1.79
VMA1	YDL185W	MNP1	P53163	194 aa	Predicted RBP	3.84	□□□□□ -1.79
VMA1	YDL185W	OCA2	P53949	197 aa		3.84	□□□□□ -1.79
VMA1	YDL185W	RRN5	Q02983	363 aa		3.84	□□□□□ -1.79
VMA1	YDL185W	ODC1	Q03028	310 aa		3.84	□□□□□ -1.79
VMA1	YDL185W	YDR124W	Q04608	324 aa		3.84	□□□□□ -1.79
VMA1	YDL185W	SWC7	Q06707	132 aa		3.84	□□□□□ -1.79
VMA1	YDL185W	YOL131W	Q08270	108 aa		3.84	□□□□□ -1.79
VMA1	YDL185W	NMD4	Q12129	218 aa		3.84	□□□□□ -1.79
VMA1	YDL185W	RMD5	Q12508	421 aa		3.84	□□□□□ -1.79
VMA1	YDL185W	CDC23	P16522	626 aa		3.84	□□□□□ -1.79
VMA1	YDL185W	MNE1	P24720	663 aa		3.84	□□□□□ -1.79
VMA1	YDL185W	ITR1	P30605	584 aa		3.84	□□□□□ -1.79
VMA1	YDL185W	SNU114	P36048	1008 aa	Known RBP	3.84	□□□□□ -1.79
VMA1	YDL185W	NSE4	P43124	402 aa		3.84	□□□□□ -1.79
VMA1	YDL185W	BNA6	P43619	295 aa		3.84	□□□□□ -1.79
VMA1	YDL185W	YJL171C	P46992	396 aa		3.84	□□□□□ -1.79
VMA1	YDL185W	NNF1	P47149	201 aa		3.84	□□□□□ -1.79
VMA1	YDL185W	MTR3	P48240	250 aa	Predicted RBP	3.84	□□□□□ -1.79
VMA1	YDL185W	CAF120	P53836	1060 aa		3.84	□□□□□ -1.79
VMA1	YDL185W	IBD2	P53892	351 aa		3.84	□□□□□ -1.79
VMA1	YDL185W	GPM2	Q12008	311 aa		3.84	□□□□□ -1.79
VMA1	YDL185W	DIN7	Q12086	430 aa		3.84	□□□□□ -1.79
VMA1	YDL185W	PKH2	Q12236	1081 aa	Known RBP	3.84	□□□□□ -1.79
VMA1	YDL185W	Q0142	Q9ZZW4	58 aa		3.84	□□□□□ -1.79
VMA1	YDL185W	DED1	P06634	604 aa	Known RBP	3.83	□□□□□ -1.8
VMA1	YDL185W	CIT2	P08679	460 aa		3.83	□□□□□ -1.8
VMA1	YDL185W	RPS18A	P0CX55	146 aa	Known RBP	3.83	□□□□□ -1.8
VMA1	YDL185W	RPS18B	P0CX56	146 aa	Predicted RBP	3.83	□□□□□ -1.8
VMA1	YDL185W	NHP6B	P11633	99 aa	Known RBP	3.83	□□□□□ -1.8
VMA1	YDL185W	MER1	P16523	270 aa		3.83	□□□□□ -1.8
VMA1	YDL185W	IDP1	P21954	428 aa	Known RBP	3.83	□□□□□ -1.8
VMA1	YDL185W	PER1	P25625	357 aa		3.83	□□□□□ -1.8
VMA1	YDL185W	NDC1	P32500	655 aa		3.83	□□□□□ -1.8
VMA1	YDL185W	EMP24	P32803	203 aa	Known RBP	3.83	□□□□□ -1.8
VMA1	YDL185W	SPO23	P33757	523 aa		3.83	□□□□□ -1.8
VMA1	YDL185W	YKL151C	P36059	337 aa		3.83	□□□□□ -1.8
VMA1	YDL185W	SHM2	P37291	469 aa	Known RBP	3.83	□□□□□ -1.8
VMA1	YDL185W	COS111	P38308	924 aa		3.83	□□□□□ -1.8
VMA1	YDL185W	IKI1	P38874	309 aa		3.83	□□□□□ -1.8
VMA1	YDL185W	NVJ1	P38881	321 aa		3.83	□□□□□ -1.8
VMA1	YDL185W	YMR144W	P40214	342 aa	Known RBP	3.83	□□□□□ -1.8
VMA1	YDL185W	HIS6	P40545	261 aa		3.83	□□□□□ -1.8
VMA1	YDL185W	BAP3	P41815	604 aa		3.83	□□□□□ -1.8
VMA1	YDL185W	GLR1	P41921	483 aa	Known RBP	3.83	□□□□□ -1.8
VMA1	YDL185W	GPI8	P49018	411 aa		3.83	□□□□□ -1.8
VMA1	YDL185W	ERV14	P53173	138 aa		3.83	□□□□□ -1.8
VMA1	YDL185W	RRN9	P53437	365 aa		3.83	□□□□□ -1.8
VMA1	YDL185W	MNT4	P53745	580 aa		3.83	□□□□□ -1.8
VMA1	YDL185W	SLG1	P54867	378 aa		3.83	□□□□□ -1.8
VMA1	YDL185W	YCL001W-A	P87012	153 aa		3.83	□□□□□ -1.8
VMA1	YDL185W	TPP1	Q03796	238 aa		3.83	□□□□□ -1.8
VMA1	YDL185W	SPO77	Q06134	477 aa		3.83	□□□□□ -1.8
VMA1	YDL185W	EAF1	Q06337	982 aa		3.83	□□□□□ -1.8
VMA1	YDL185W	OPT2	Q06593	877 aa		3.83	□□□□□ -1.8
VMA1	YDL185W	CYK3	Q07533	885 aa		3.83	□□□□□ -1.8
VMA1	YDL185W	CMC2	Q3E7A4	109 aa		3.83	□□□□□ -1.8
VMA1	YDL185W	HXK2	P04807	486 aa	Known RBP	3.83	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms