RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA1YDL185W DRS1P32892 752 aaKnown RBP7.08□□□□□ -1.28
VMA1YDL185W MTC1P47018 478 aaKnown RBP6.39□□□□□ -1.39
VMA1YDL185W BFR2Q06631 534 aaKnown RBP6.37□□□□□ -1.39
VMA1YDL185W SPA2P23201 1466 aaKnown RBP6.22□□□□□ -1.41
VMA1YDL185W SGS1P35187 1447 aa6.14□□□□□ -1.43
VMA1YDL185W TFA1P36100 482 aa6.14□□□□□ -1.43
VMA1YDL185W SSN2P38931 1420 aa6.11□□□□□ -1.43
VMA1YDL185W SKI3P17883 1432 aaKnown RBP5.96□□□□□ -1.45
VMA1YDL185W NOP2P40991 618 aaKnown RBP5.92□□□□□ -1.46
VMA1YDL185W NSR1P27476 414 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
VMA1YDL185W RQC2Q12532 1038 aaKnown RBP5.86□□□□□ -1.47
VMA1YDL185W INO80P53115 1489 aa5.85□□□□□ -1.47
VMA1YDL185W DIP2Q12220 943 aaPredicted RBP5.79□□□□□ -1.48
VMA1YDL185W CHD1P32657 1468 aa5.71□□□□□ -1.5
VMA1YDL185W AVT3P36062 692 aa5.7□□□□□ -1.5
VMA1YDL185W MMS22Q06164 1454 aa5.69□□□□□ -1.5
VMA1YDL185W UFD4P33202 1483 aa5.62□□□□□ -1.51
VMA1YDL185W XRN1P22147 1528 aaKnown RBP5.61□□□□□ -1.51
VMA1YDL185W TCB3Q03640 1545 aaKnown RBP5.6□□□□□ -1.51
VMA1YDL185W RSE1Q04693 1361 aaKnown RBP5.59□□□□□ -1.51
VMA1YDL185W TY1B-DR4Q07793 1604 aa5.56□□□□□ -1.52
VMA1YDL185W MON2P48563 1636 aaPredicted RBP5.54□□□□□ -1.52
VMA1YDL185W EBP2P36049 427 aaKnown RBP5.54□□□□□ -1.52
VMA1YDL185W TRM732Q03496 1420 aa5.53□□□□□ -1.52
VMA1YDL185W HSL1P34244 1518 aa5.53□□□□□ -1.52
VMA1YDL185W CAB3P36076 571 aa5.52□□□□□ -1.53
VMA1YDL185W ENP1P38333 483 aaKnown RBP5.52□□□□□ -1.53
VMA1YDL185W SPP41P38904 1435 aa5.48□□□□□ -1.53
VMA1YDL185W YPR148CQ06523 435 aa5.48□□□□□ -1.53
VMA1YDL185W IKI3Q06706 1349 aaKnown RBP5.47□□□□□ -1.53
VMA1YDL185W SPT6P23615 1451 aaKnown RBP5.47□□□□□ -1.53
VMA1YDL185W STH1P32597 1359 aa5.47□□□□□ -1.53
VMA1YDL185W HIR3P47171 1648 aa5.47□□□□□ -1.53
VMA1YDL185W THO2P53552 1597 aaKnown RBP5.45□□□□□ -1.54
VMA1YDL185W STU1P38198 1513 aa5.45□□□□□ -1.54
VMA1YDL185W NUP170P38181 1502 aa5.44□□□□□ -1.54
VMA1YDL185W REV3P14284 1504 aa5.44□□□□□ -1.54
VMA1YDL185W MYO2P19524 1574 aaKnown RBP5.43□□□□□ -1.54
VMA1YDL185W SSK2P53599 1579 aa5.43□□□□□ -1.54
VMA1YDL185W SIN3P22579 1536 aa5.43□□□□□ -1.54
VMA1YDL185W DMA1P38823 416 aa5.42□□□□□ -1.54
VMA1YDL185W SPT7P35177 1332 aa5.42□□□□□ -1.54
VMA1YDL185W SSM4P40318 1319 aa5.41□□□□□ -1.54
VMA1YDL185W ECM5Q03214 1411 aa5.4□□□□□ -1.54
VMA1YDL185W BPT1P14772 1559 aa5.4□□□□□ -1.55
VMA1YDL185W POL5P39985 1022 aaKnown RBP5.4□□□□□ -1.55
VMA1YDL185W PRS1P32895 427 aaKnown RBP5.39□□□□□ -1.55
VMA1YDL185W SAS10Q12136 610 aaPredicted RBP5.39□□□□□ -1.55
VMA1YDL185W POL1P13382 1468 aa5.39□□□□□ -1.55
VMA1YDL185W SCC2Q04002 1493 aa5.39□□□□□ -1.55
VMA1YDL185W ESP1Q03018 1630 aa5.37□□□□□ -1.55
VMA1YDL185W YTA7P40340 1379 aa5.37□□□□□ -1.55
VMA1YDL185W PDR10P51533 1564 aa5.35□□□□□ -1.55
VMA1YDL185W TAF2P23255 1407 aa5.34□□□□□ -1.55
VMA1YDL185W MLP2P40457 1679 aa5.34□□□□□ -1.55
VMA1YDL185W SEC3P33332 1336 aaKnown RBP5.34□□□□□ -1.55
VMA1YDL185W PEP1P32319 1579 aa5.33□□□□□ -1.56
VMA1YDL185W TAF7Q05021 590 aa5.33□□□□□ -1.56
VMA1YDL185W PTP3P40048 928 aa5.31□□□□□ -1.56
VMA1YDL185W IME2P32581 645 aa5.29□□□□□ -1.56
VMA1YDL185W SIS2P36024 562 aa5.29□□□□□ -1.56
VMA1YDL185W RTT106P40161 455 aa5.29□□□□□ -1.56
VMA1YDL185W CFT1Q06632 1357 aaKnown RBP5.28□□□□□ -1.56
VMA1YDL185W BUD4P47136 1447 aa5.27□□□□□ -1.57
VMA1YDL185W MYO4P32492 1471 aa5.27□□□□□ -1.57
VMA1YDL185W DNA2P38859 1522 aa5.27□□□□□ -1.57
VMA1YDL185W SRB8P25648 1427 aa5.27□□□□□ -1.57
VMA1YDL185W YLR419WQ06698 1435 aaKnown RBP5.26□□□□□ -1.57
VMA1YDL185W YOR1P53049 1477 aa5.26□□□□□ -1.57
VMA1YDL185W YCF1P39109 1515 aaKnown RBP5.26□□□□□ -1.57
VMA1YDL185W SNQ2P32568 1501 aaKnown RBP5.25□□□□□ -1.57
VMA1YDL185W CLC1P17891 233 aa5.24□□□□□ -1.57
VMA1YDL185W OPY1P38271 328 aa5.24□□□□□ -1.57
VMA1YDL185W RKR1Q04781 1562 aa5.24□□□□□ -1.57
VMA1YDL185W PAN1P32521 1480 aa5.24□□□□□ -1.57
VMA1YDL185W YPK9Q12697 1472 aa5.24□□□□□ -1.57
VMA1YDL185W TCB2P48231 1178 aa5.23□□□□□ -1.57
VMA1YDL185W KOG1P38873 1557 aa5.22□□□□□ -1.57
VMA1YDL185W SMC4Q12267 1418 aa5.22□□□□□ -1.57
VMA1YDL185W TSC11P40061 1430 aa5.22□□□□□ -1.57
VMA1YDL185W URN1Q06525 465 aaKnown RBP5.21□□□□□ -1.58
VMA1YDL185W LEU3P08638 886 aa5.21□□□□□ -1.58
VMA1YDL185W PSD2P53037 1138 aaKnown RBP5.2□□□□□ -1.58
VMA1YDL185W PDR15Q04182 1529 aaKnown RBP5.2□□□□□ -1.58
VMA1YDL185W GEA1P47102 1408 aaPredicted RBP5.19□□□□□ -1.58
VMA1YDL185W YFR016CP43597 1233 aaKnown RBP5.19□□□□□ -1.58
VMA1YDL185W SWR1Q05471 1514 aa5.19□□□□□ -1.58
VMA1YDL185W TY3B-GQ99315 1547 aa5.19□□□□□ -1.58
VMA1YDL185W ATG2P53855 1592 aa5.18□□□□□ -1.58
VMA1YDL185W ULS1Q08562 1619 aa5.17□□□□□ -1.58
VMA1YDL185W TOP2P06786 1428 aaKnown RBP5.17□□□□□ -1.58
VMA1YDL185W RPL17AP05740 184 aaKnown RBP5.17□□□□□ -1.58
VMA1YDL185W RPL17BP46990 184 aaKnown RBP5.17□□□□□ -1.58
VMA1YDL185W ESC1Q03661 1658 aaKnown RBP5.16□□□□□ -1.58
VMA1YDL185W TY1B-DR3Q99231 1755 aa5.16□□□□□ -1.58
VMA1YDL185W RPC31P17890 251 aa5.16□□□□□ -1.58
VMA1YDL185W IRC20Q06554 1556 aa5.15□□□□□ -1.58
VMA1YDL185W IFH1P39520 1085 aa5.15□□□□□ -1.59
VMA1YDL185W FUN12P39730 1002 aaKnown RBP5.14□□□□□ -1.59
VMA1YDL185W NUP159P40477 1460 aa5.14□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 44 ms