RNA–Protein interactions for RNA: YAL047C

SPC72, Transcript of Component of the cytoplasmic Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC72, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC72YAL047C RPN5Q12250 445 aaKnown RBP2.09□□□□□ -2.08
SPC72YAL047C HRT3Q12347 344 aa2.09□□□□□ -2.08
SPC72YAL047C FRE6Q12473 712 aa2.09□□□□□ -2.08
SPC72YAL047C TOR1P35169 2470 aa2.08□□□□□ -2.08
SPC72YAL047C CLC1P17891 233 aa2.08□□□□□ -2.08
SPC72YAL047C RVS161P25343 265 aaKnown RBP2.08□□□□□ -2.08
SPC72YAL047C SPS22P25380 463 aa2.08□□□□□ -2.08
SPC72YAL047C RAD14P28519 371 aa2.08□□□□□ -2.08
SPC72YAL047C PUP2P32379 260 aa2.08□□□□□ -2.08
SPC72YAL047C SWD3P38123 315 aa2.08□□□□□ -2.08
SPC72YAL047C PFF1P38244 976 aa2.08□□□□□ -2.08
SPC72YAL047C MTC6P38849 526 aa2.08□□□□□ -2.08
SPC72YAL047C REE1P40893 198 aa2.08□□□□□ -2.08
SPC72YAL047C LAM5P43560 674 aa2.08□□□□□ -2.08
SPC72YAL047C YGR149WP48236 432 aa2.08□□□□□ -2.08
SPC72YAL047C RMD9P53140 646 aaKnown RBP2.08□□□□□ -2.08
SPC72YAL047C PCP1P53259 346 aa2.08□□□□□ -2.08
SPC72YAL047C YGR111WP53265 400 aa2.08□□□□□ -2.08
SPC72YAL047C YPL107WQ02873 248 aa2.08□□□□□ -2.08
SPC72YAL047C DON1Q05610 365 aa2.08□□□□□ -2.08
SPC72YAL047C MMR1Q06324 491 aa2.08□□□□□ -2.08
SPC72YAL047C MHR1Q06630 226 aa2.08□□□□□ -2.08
SPC72YAL047C MRPL35Q06678 367 aa2.08□□□□□ -2.08
SPC72YAL047C BSC6Q08280 497 aa2.08□□□□□ -2.08
SPC72YAL047C VPS54Q12071 889 aa2.08□□□□□ -2.08
SPC72YAL047C NFI1Q12216 726 aa2.08□□□□□ -2.08
SPC72YAL047C SIR4P11978 1358 aa2.07□□□□□ -2.08
SPC72YAL047C URA4P20051 364 aa2.07□□□□□ -2.08
SPC72YAL047C DAL2P25335 343 aa2.07□□□□□ -2.08
SPC72YAL047C PIM1P36775 1133 aa2.07□□□□□ -2.08
SPC72YAL047C RIB5P38145 238 aa2.07□□□□□ -2.08
SPC72YAL047C MIX23P38162 196 aa2.07□□□□□ -2.08
SPC72YAL047C SER3P40054 469 aa2.07□□□□□ -2.08
SPC72YAL047C FMS1P50264 508 aa2.07□□□□□ -2.08
SPC72YAL047C YGL138CP53122 345 aa2.07□□□□□ -2.08
SPC72YAL047C ACL4Q03771 387 aa2.07□□□□□ -2.08
SPC72YAL047C RRP45Q05636 305 aaKnown RBP2.07□□□□□ -2.08
SPC72YAL047C HRI1Q05905 244 aaKnown RBP2.07□□□□□ -2.08
SPC72YAL047C DCI1Q08558 271 aa2.07□□□□□ -2.08
SPC72YAL047C PKH2Q12236 1081 aaKnown RBP2.07□□□□□ -2.08
SPC72YAL047C SPS4P09937 338 aa2.07□□□□□ -2.08
SPC72YAL047C CLN1P20437 546 aa2.07□□□□□ -2.08
SPC72YAL047C ISY1P21374 235 aaPredicted RBP2.07□□□□□ -2.08
SPC72YAL047C GYP6P32806 458 aa2.07□□□□□ -2.08
SPC72YAL047C HEL1P36113 551 aa2.07□□□□□ -2.08
SPC72YAL047C PRM5P40476 318 aa2.07□□□□□ -2.08
SPC72YAL047C YIP1P53039 248 aa2.07□□□□□ -2.08
SPC72YAL047C HER2Q03557 464 aa2.07□□□□□ -2.08
SPC72YAL047C PRP42Q03776 544 aaKnown RBP2.07□□□□□ -2.08
SPC72YAL047C SRV2P17555 526 aaKnown RBP2.06□□□□□ -2.08
SPC72YAL047C ATP10P18496 279 aa2.06□□□□□ -2.08
SPC72YAL047C KRR1P25586 316 aaPredicted RBP2.06□□□□□ -2.08
SPC72YAL047C POT1P27796 417 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
SPC72YAL047C APE2P32454 952 aaKnown RBP2.06□□□□□ -2.08
SPC72YAL047C LTV1P34078 463 aa2.06□□□□□ -2.08
SPC72YAL047C ARA1P38115 344 aa2.06□□□□□ -2.08
SPC72YAL047C NTC20P38302 140 aaPredicted RBP2.06□□□□□ -2.08
SPC72YAL047C POP2P39008 433 aa2.06□□□□□ -2.08
SPC72YAL047C TRS85P46944 698 aa2.06□□□□□ -2.08
SPC72YAL047C RHO5P53879 331 aaKnown RBP2.06□□□□□ -2.08
SPC72YAL047C OCA2P53949 197 aa2.06□□□□□ -2.08
SPC72YAL047C SKO1Q02100 647 aa2.06□□□□□ -2.08
SPC72YAL047C HOT1Q03213 719 aa2.06□□□□□ -2.08
SPC72YAL047C UAF30Q08747 228 aa2.06□□□□□ -2.08
SPC72YAL047C VAM3Q12241 283 aa2.06□□□□□ -2.08
SPC72YAL047C RBD2Q12270 262 aa2.06□□□□□ -2.08
SPC72YAL047C HIF1Q12373 385 aa2.06□□□□□ -2.08
SPC72YAL047C TY1B-AO13527 1196 aaKnown RBP2.05□□□□□ -2.08
SPC72YAL047C ADH2P00331 348 aaKnown RBP2.05□□□□□ -2.08
SPC72YAL047C RPL1AP0CX43 217 aaKnown RBP2.05□□□□□ -2.08
SPC72YAL047C RPL1BP0CX44 217 aaKnown RBP2.05□□□□□ -2.08
SPC72YAL047C RPI1P23250 407 aaKnown RBP2.05□□□□□ -2.08
SPC72YAL047C BRF1P29056 596 aa2.05□□□□□ -2.08
SPC72YAL047C HXT1P32465 570 aa2.05□□□□□ -2.08
SPC72YAL047C RPS0AP32905 252 aaKnown RBP2.05□□□□□ -2.08
SPC72YAL047C NIP100P33420 868 aa2.05□□□□□ -2.08
SPC72YAL047C LAS1P36146 502 aaPredicted RBP2.05□□□□□ -2.08
SPC72YAL047C FAD1P38913 306 aa2.05□□□□□ -2.08
SPC72YAL047C YMR147WP40218 223 aaKnown RBP2.05□□□□□ -2.08
SPC72YAL047C MDE1P47095 244 aa2.05□□□□□ -2.08
SPC72YAL047C ECM27P47144 725 aa2.05□□□□□ -2.08
SPC72YAL047C COS5P47187 383 aa2.05□□□□□ -2.08
SPC72YAL047C TIS11P47977 285 aa2.05□□□□□ -2.08
SPC72YAL047C SHY1P53266 389 aa2.05□□□□□ -2.08
SPC72YAL047C YMR130WQ04223 302 aa2.05□□□□□ -2.08
SPC72YAL047C COS7Q07788 383 aa2.05□□□□□ -2.08
SPC72YAL047C DIS3Q08162 1001 aaKnown RBP2.05□□□□□ -2.08
SPC72YAL047C TIM18Q08749 192 aa2.05□□□□□ -2.08
SPC72YAL047C RRD2Q12461 358 aa2.05□□□□□ -2.08
SPC72YAL047C VPS13Q07878 3144 aa2.05□□□□□ -2.08
SPC72YAL047C FIG2P25653 1609 aa2.05□□□□□ -2.08
SPC72YAL047C HIS4P00815 799 aaKnown RBP2.05□□□□□ -2.08
SPC72YAL047C SPO7P18410 259 aa2.05□□□□□ -2.08
SPC72YAL047C TRX1P22217 103 aaKnown RBP2.05□□□□□ -2.08
SPC72YAL047C TIP1P27654 210 aaPredicted RBP2.05□□□□□ -2.08
SPC72YAL047C MSP1P28737 362 aa2.05□□□□□ -2.08
SPC72YAL047C BEM1P29366 551 aa2.05□□□□□ -2.08
SPC72YAL047C HIR2P32480 875 aa2.05□□□□□ -2.08
SPC72YAL047C SPR1P32603 445 aa2.05□□□□□ -2.08
SPC72YAL047C MNS1P32906 549 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms