RNA–Protein interactions for RNA: YMR159C

ATG16, Transcript of Conserved protein involved in autophagy, yeastyeast

Gene ATG16, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG16YMR159C SFH5P47008 294 aa3.71□□□□□ -1.82
ATG16YMR159C BCH1Q05029 724 aa3.71□□□□□ -1.82
ATG16YMR159C FDH1Q08911 376 aa3.71□□□□□ -1.82
ATG16YMR159C ADH2P00331 348 aaKnown RBP3.7□□□□□ -1.82
ATG16YMR159C NFT1P0CE68 1218 aa3.7□□□□□ -1.82
ATG16YMR159C ERV1P27882 189 aa3.7□□□□□ -1.82
ATG16YMR159C SPR1P32603 445 aa3.7□□□□□ -1.82
ATG16YMR159C RRT2P38332 387 aa3.7□□□□□ -1.82
ATG16YMR159C YPS6P40583 537 aa3.7□□□□□ -1.82
ATG16YMR159C RHO5P53879 331 aaKnown RBP3.7□□□□□ -1.82
ATG16YMR159C OAZ1Q02803 292 aa3.7□□□□□ -1.82
ATG16YMR159C RMT2Q03305 412 aa3.7□□□□□ -1.82
ATG16YMR159C RPN9Q04062 393 aaKnown RBP3.7□□□□□ -1.82
ATG16YMR159C YLR345WQ06137 509 aa3.7□□□□□ -1.82
ATG16YMR159C TPT1Q12272 230 aaKnown RBP3.7□□□□□ -1.82
ATG16YMR159C SNU66Q12420 587 aaPredicted RBP3.7□□□□□ -1.82
ATG16YMR159C MTR10Q99189 972 aa3.7□□□□□ -1.82
ATG16YMR159C TY1B-AO13527 1196 aaKnown RBP3.69□□□□□ -1.82
ATG16YMR159C CYC3P06182 269 aa3.69□□□□□ -1.82
ATG16YMR159C RPS8AP0CX39 200 aaKnown RBP3.69□□□□□ -1.82
ATG16YMR159C RPS8BP0CX40 200 aaKnown RBP3.69□□□□□ -1.82
ATG16YMR159C RAD57P25301 460 aa3.69□□□□□ -1.82
ATG16YMR159C POP5P28005 173 aa3.69□□□□□ -1.82
ATG16YMR159C DBF4P32325 704 aa3.69□□□□□ -1.82
ATG16YMR159C JLP2P40206 208 aa3.69□□□□□ -1.82
ATG16YMR159C TCB2P48231 1178 aa3.69□□□□□ -1.82
ATG16YMR159C YGL039WP53183 348 aaKnown RBP3.69□□□□□ -1.82
ATG16YMR159C PEX25Q02969 394 aa3.69□□□□□ -1.82
ATG16YMR159C ADD37Q03233 198 aa3.69□□□□□ -1.82
ATG16YMR159C MHR1Q06630 226 aa3.69□□□□□ -1.82
ATG16YMR159C COX3P00420 269 aa3.68□□□□□ -1.82
ATG16YMR159C RVS161P25343 265 aaKnown RBP3.68□□□□□ -1.82
ATG16YMR159C RRP1P35178 278 aaPredicted RBP3.68□□□□□ -1.82
ATG16YMR159C PHB2P50085 310 aa3.68□□□□□ -1.82
ATG16YMR159C OCA2P53949 197 aa3.68□□□□□ -1.82
ATG16YMR159C YMR027WQ04371 470 aa3.68□□□□□ -1.82
ATG16YMR159C RRP9Q06506 573 aaKnown RBP3.68□□□□□ -1.82
ATG16YMR159C RUP1Q12242 671 aa3.68□□□□□ -1.82
ATG16YMR159C HOM3P10869 527 aa3.67□□□□□ -1.82
ATG16YMR159C VHS2P40463 436 aa3.67□□□□□ -1.82
ATG16YMR159C YLR152CP54072 576 aa3.67□□□□□ -1.82
ATG16YMR159C PRP42Q03776 544 aaKnown RBP3.67□□□□□ -1.82
ATG16YMR159C SNT309Q06091 175 aaPredicted RBP3.67□□□□□ -1.82
ATG16YMR159C RAX1Q08760 435 aa3.67□□□□□ -1.82
ATG16YMR159C VPS54Q12071 889 aa3.67□□□□□ -1.82
ATG16YMR159C RBD2Q12270 262 aa3.67□□□□□ -1.82
ATG16YMR159C WTM1Q12363 437 aaKnown RBP3.67□□□□□ -1.82
ATG16YMR159C ISA2Q12425 185 aa3.67□□□□□ -1.82
ATG16YMR159C MDH1P17505 334 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
ATG16YMR159C HXT1P32465 570 aa3.66□□□□□ -1.82
ATG16YMR159C ASC1P38011 319 aaKnown RBP3.66□□□□□ -1.82
ATG16YMR159C GAT2P40209 560 aa3.66□□□□□ -1.82
ATG16YMR159C ZIM17P42844 174 aa3.66□□□□□ -1.82
ATG16YMR159C IRC25Q07951 179 aa3.66□□□□□ -1.82
ATG16YMR159C TMC1Q08422 150 aaPredicted RBP3.66□□□□□ -1.82
ATG16YMR159C AEP3Q12089 606 aa3.66□□□□□ -1.82
ATG16YMR159C IMA3P0CW40 589 aa3.65□□□□□ -1.83
ATG16YMR159C IMA4P0CW41 589 aa3.65□□□□□ -1.83
ATG16YMR159C ARO3P14843 370 aaKnown RBP3.65□□□□□ -1.83
ATG16YMR159C NOP1P15646 327 aaKnown RBP3.65□□□□□ -1.83
ATG16YMR159C CHK1P38147 527 aa3.65□□□□□ -1.83
ATG16YMR159C OLA1P38219 394 aaKnown RBP3.65□□□□□ -1.83
ATG16YMR159C SER3P40054 469 aa3.65□□□□□ -1.83
ATG16YMR159C MDE1P47095 244 aa3.65□□□□□ -1.83
ATG16YMR159C SHY1P53266 389 aa3.65□□□□□ -1.83
ATG16YMR159C MMT1Q03218 510 aa3.65□□□□□ -1.83
ATG16YMR159C NDE2Q07500 545 aa3.65□□□□□ -1.83
ATG16YMR159C IMA2Q08295 589 aa3.65□□□□□ -1.83
ATG16YMR159C YRM1Q12340 786 aa3.65□□□□□ -1.83
ATG16YMR159C YCL068CP25593 260 aa3.64□□□□□ -1.83
ATG16YMR159C MPE1P35728 441 aaKnown RBP3.64□□□□□ -1.83
ATG16YMR159C YBR056WP38081 501 aa3.64□□□□□ -1.83
ATG16YMR159C YGR111WP53265 400 aa3.64□□□□□ -1.83
ATG16YMR159C MTQ1P53944 314 aa3.64□□□□□ -1.83
ATG16YMR159C STD1Q02794 444 aa3.64□□□□□ -1.83
ATG16YMR159C PHA2P32452 334 aa3.63□□□□□ -1.83
ATG16YMR159C LTV1P34078 463 aa3.63□□□□□ -1.83
ATG16YMR159C ATP3P38077 311 aaKnown RBP3.63□□□□□ -1.83
ATG16YMR159C ZTA1P38230 334 aaKnown RBP3.63□□□□□ -1.83
ATG16YMR159C STN1P38960 494 aa3.63□□□□□ -1.83
ATG16YMR159C YML6P51998 286 aa3.63□□□□□ -1.83
ATG16YMR159C AIM32Q04689 311 aa3.63□□□□□ -1.83
ATG16YMR159C UAF30Q08747 228 aa3.63□□□□□ -1.83
ATG16YMR159C CEX1Q12453 761 aa3.63□□□□□ -1.83
ATG16YMR159C HSP104P31539 908 aaKnown RBP3.62□□□□□ -1.83
ATG16YMR159C CYS4P32582 507 aaKnown RBP3.62□□□□□ -1.83
ATG16YMR159C SRP72P38688 640 aaKnown RBP3.62□□□□□ -1.83
ATG16YMR159C YIL029CP40538 142 aa3.62□□□□□ -1.83
ATG16YMR159C BUD27P43573 796 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
ATG16YMR159C BRO1P48582 844 aa3.62□□□□□ -1.83
ATG16YMR159C CCE1Q03702 353 aa3.62□□□□□ -1.83
ATG16YMR159C YDR341CQ05506 607 aaKnown RBP3.62□□□□□ -1.83
ATG16YMR159C YLR456WQ06199 204 aa3.62□□□□□ -1.83
ATG16YMR159C PLP2Q12017 286 aa3.62□□□□□ -1.83
ATG16YMR159C SMC6Q12749 1114 aa3.62□□□□□ -1.83
ATG16YMR159C PRS1P32895 427 aaKnown RBP3.61□□□□□ -1.83
ATG16YMR159C SBE22P38814 852 aa3.61□□□□□ -1.83
ATG16YMR159C COX14P39103 70 aa3.61□□□□□ -1.83
ATG16YMR159C SIM1P40472 476 aa3.61□□□□□ -1.83
ATG16YMR159C NUP116Q02630 1113 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms