RNA–Protein interactions for RNA: YMR065W

KAR5, Transcript of Protein required for nuclear membrane fusion during karyogamy, yeast

Gene KAR5, Length 1,515 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KAR5	YMR065W	PAN6	P40459	309 aa		3.84	□□□□□ -1.8
KAR5	YMR065W	TCB2	P48231	1178 aa		3.84	□□□□□ -1.8
KAR5	YMR065W	MTM1	P53320	366 aa		3.84	□□□□□ -1.8
KAR5	YMR065W	AIM32	Q04689	311 aa		3.84	□□□□□ -1.8
KAR5	YMR065W	YLR345W	Q06137	509 aa		3.84	□□□□□ -1.8
KAR5	YMR065W	TRP1	P00912	224 aa		3.83	□□□□□ -1.8
KAR5	YMR065W	ADE4	P04046	510 aa	Known RBP	3.83	□□□□□ -1.8
KAR5	YMR065W	LDB16	P25587	256 aa		3.83	□□□□□ -1.8
KAR5	YMR065W	YBR056W	P38081	501 aa		3.83	□□□□□ -1.8
KAR5	YMR065W	SRP72	P38688	640 aa	Known RBP	3.83	□□□□□ -1.8
KAR5	YMR065W	SHE10	P53075	577 aa		3.83	□□□□□ -1.8
KAR5	YMR065W	RHO5	P53879	331 aa	Known RBP	3.83	□□□□□ -1.8
KAR5	YMR065W	PEX25	Q02969	394 aa		3.83	□□□□□ -1.8
KAR5	YMR065W	ATG34	Q12292	412 aa		3.83	□□□□□ -1.8
KAR5	YMR065W	CLN3	P13365	580 aa		3.82	□□□□□ -1.8
KAR5	YMR065W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.82	□□□□□ -1.8	not detected
KAR5	YMR065W	RAD57	P25301	460 aa		3.82	□□□□□ -1.8
KAR5	YMR065W	PXA2	P34230	853 aa		3.82	□□□□□ -1.8
KAR5	YMR065W	ASC1	P38011	319 aa	Known RBP	3.82	□□□□□ -1.8
KAR5	YMR065W	SDT1	P53078	280 aa		3.82	□□□□□ -1.8
KAR5	YMR065W	BCH1	Q05029	724 aa		3.82	□□□□□ -1.8
KAR5	YMR065W	SRL2	Q12020	392 aa		3.82	□□□□□ -1.8
KAR5	YMR065W	RPS8A	P0CX39	200 aa	Known RBP	3.81	□□□□□ -1.8
KAR5	YMR065W	RPS8B	P0CX40	200 aa	Known RBP	3.81	□□□□□ -1.8
KAR5	YMR065W	VHS2	P40463	436 aa		3.81	□□□□□ -1.8
KAR5	YMR065W	SFH5	P47008	294 aa		3.81	□□□□□ -1.8
KAR5	YMR065W	YGR111W	P53265	400 aa		3.81	□□□□□ -1.8
KAR5	YMR065W	URH1	Q04179	340 aa		3.81	□□□□□ -1.8
KAR5	YMR065W	TPT1	Q12272	230 aa	Known RBP	3.81	□□□□□ -1.8
KAR5	YMR065W	YRM1	Q12340	786 aa		3.81	□□□□□ -1.8
KAR5	YMR065W	HRT3	Q12347	344 aa		3.81	□□□□□ -1.8
KAR5	YMR065W	ADH2	P00331	348 aa	Known RBP	3.8	□□□□□ -1.8
KAR5	YMR065W	NFT1	P0CE68	1218 aa		3.8	□□□□□ -1.8
KAR5	YMR065W	CDC60	P26637	1090 aa	Known RBP	3.8	□□□□□ -1.8
KAR5	YMR065W	SWD3	P38123	315 aa		3.8	□□□□□ -1.8
KAR5	YMR065W	ZTA1	P38230	334 aa	Known RBP	3.8	□□□□□ -1.8
KAR5	YMR065W	MSG5	P38590	489 aa		3.8	□□□□□ -1.8
KAR5	YMR065W	SER3	P40054	469 aa		3.8	□□□□□ -1.8
KAR5	YMR065W	JLP2	P40206	208 aa		3.8	□□□□□ -1.8
KAR5	YMR065W	PRE5	P40302	234 aa	Known RBP	3.8	□□□□□ -1.8
KAR5	YMR065W	TOM22	P49334	152 aa		3.8	□□□□□ -1.8
KAR5	YMR065W	RPN9	Q04062	393 aa	Known RBP	3.8	□□□□□ -1.8
KAR5	YMR065W	NDE2	Q07500	545 aa		3.8	□□□□□ -1.8
KAR5	YMR065W	CYC3	P06182	269 aa		3.8	□□□□□ -1.8
KAR5	YMR065W	ARO3	P14843	370 aa	Known RBP	3.8	□□□□□ -1.8
KAR5	YMR065W	RVS161	P25343	265 aa	Known RBP	3.8	□□□□□ -1.8
KAR5	YMR065W	NIP1	P32497	812 aa	Known RBP	3.8	□□□□□ -1.8
KAR5	YMR065W	VMA8	P32610	256 aa	Known RBP	3.8	□□□□□ -1.8
KAR5	YMR065W	GAT2	P40209	560 aa		3.8	□□□□□ -1.8
KAR5	YMR065W	MMT1	Q03218	510 aa		3.8	□□□□□ -1.8
KAR5	YMR065W	PRP42	Q03776	544 aa	Known RBP	3.8	□□□□□ -1.8
KAR5	YMR065W	RRP9	Q06506	573 aa	Known RBP	3.8	□□□□□ -1.8
KAR5	YMR065W	DCI1	Q08558	271 aa		3.8	□□□□□ -1.8
KAR5	YMR065W	COX3	P00420	269 aa		3.79	□□□□□ -1.8
KAR5	YMR065W	POP5	P28005	173 aa		3.79	□□□□□ -1.8
KAR5	YMR065W	RIM1	P32445	135 aa	Known RBP	3.79	□□□□□ -1.8
KAR5	YMR065W	CYS4	P32582	507 aa	Known RBP	3.79	□□□□□ -1.8
KAR5	YMR065W	MRPL4	P36517	319 aa		3.79	□□□□□ -1.8
KAR5	YMR065W	ATP3	P38077	311 aa	Known RBP	3.79	□□□□□ -1.8
KAR5	YMR065W	OLA1	P38219	394 aa	Known RBP	3.79	□□□□□ -1.8
KAR5	YMR065W	YPS6	P40583	537 aa		3.79	□□□□□ -1.8
KAR5	YMR065W	YML6	P51998	286 aa		3.79	□□□□□ -1.8
KAR5	YMR065W	PIB2	P53191	635 aa		3.79	□□□□□ -1.8
KAR5	YMR065W	IMA3	P0CW40	589 aa		3.78	□□□□□ -1.8
KAR5	YMR065W	IMA4	P0CW41	589 aa		3.78	□□□□□ -1.8
KAR5	YMR065W	NOP1	P15646	327 aa	Known RBP	3.78	□□□□□ -1.8
KAR5	YMR065W	ISY1	P21374	235 aa	Predicted RBP	3.78	□□□□□ -1.8
KAR5	YMR065W	YCL068C	P25593	260 aa		3.78	□□□□□ -1.8
KAR5	YMR065W	HEL1	P36113	551 aa		3.78	□□□□□ -1.8
KAR5	YMR065W	CHK1	P38147	527 aa		3.78	□□□□□ -1.8
KAR5	YMR065W	YER079W	P40052	210 aa	Known RBP	3.78	□□□□□ -1.8
KAR5	YMR065W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	3.78	□□□□□ -1.8	not detected
KAR5	YMR065W	CIK1	Q01649	594 aa		3.78	□□□□□ -1.8
KAR5	YMR065W	NUP116	Q02630	1113 aa		3.78	□□□□□ -1.8
KAR5	YMR065W	STD1	Q02794	444 aa		3.78	□□□□□ -1.8
KAR5	YMR065W	CCE1	Q03702	353 aa		3.78	□□□□□ -1.8
KAR5	YMR065W	SNT309	Q06091	175 aa	Predicted RBP	3.78	□□□□□ -1.8
KAR5	YMR065W	IRC25	Q07951	179 aa		3.78	□□□□□ -1.8
KAR5	YMR065W	IMA2	Q08295	589 aa		3.78	□□□□□ -1.8
KAR5	YMR065W	TMC1	Q08422	150 aa	Predicted RBP	3.78	□□□□□ -1.8
KAR5	YMR065W	RUP1	Q12242	671 aa		3.78	□□□□□ -1.8
KAR5	YMR065W	KAR9	P32526	644 aa		3.77	□□□□□ -1.81
KAR5	YMR065W	RRP1	P35178	278 aa	Predicted RBP	3.77	□□□□□ -1.81
KAR5	YMR065W	YIL029C	P40538	142 aa		3.77	□□□□□ -1.81
KAR5	YMR065W	MDE1	P47095	244 aa		3.77	□□□□□ -1.81
KAR5	YMR065W	BRO1	P48582	844 aa		3.77	□□□□□ -1.81
KAR5	YMR065W	MTQ1	P53944	314 aa		3.77	□□□□□ -1.81
KAR5	YMR065W	RAX1	Q08760	435 aa		3.77	□□□□□ -1.81
KAR5	YMR065W	GPM3	Q12326	303 aa		3.77	□□□□□ -1.81
KAR5	YMR065W	SNU66	Q12420	587 aa	Predicted RBP	3.77	□□□□□ -1.81
KAR5	YMR065W	TY1B-DR4	Q07793	1604 aa		3.77	□□□□□ -1.81
KAR5	YMR065W	NAM2	P11325	894 aa		3.76	□□□□□ -1.81
KAR5	YMR065W	LTV1	P34078	463 aa		3.76	□□□□□ -1.81
KAR5	YMR065W	ADD37	Q03233	198 aa		3.76	□□□□□ -1.81
KAR5	YMR065W	UAF30	Q08747	228 aa		3.76	□□□□□ -1.81
KAR5	YMR065W	WTM1	Q12363	437 aa	Known RBP	3.76	□□□□□ -1.81
KAR5	YMR065W	CDC21	P06785	304 aa		3.75	□□□□□ -1.81
KAR5	YMR065W	DST1	P07273	309 aa		3.75	□□□□□ -1.81
KAR5	YMR065W	HSP104	P31539	908 aa	Known RBP	3.75	□□□□□ -1.81
KAR5	YMR065W	FAD1	P38913	306 aa		3.75	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 44.3 ms