RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C CPR2P23285 205 aa3.8□□□□□ -1.8
USB1YLR132C RHB1P25378 209 aa3.8□□□□□ -1.8
USB1YLR132C CDC60P26637 1090 aaKnown RBP3.8□□□□□ -1.8
USB1YLR132C KRE2P27809 442 aa3.8□□□□□ -1.8
USB1YLR132C URA7P28274 579 aaKnown RBP3.8□□□□□ -1.8
USB1YLR132C HIR2P32480 875 aa3.8□□□□□ -1.8
USB1YLR132C PMU1P36069 295 aa3.8□□□□□ -1.8
USB1YLR132C YJR011CP47086 261 aaPredicted RBP3.8□□□□□ -1.8
USB1YLR132C PCP1P53259 346 aa3.8□□□□□ -1.8
USB1YLR132C CAF40P53829 373 aa3.8□□□□□ -1.8
USB1YLR132C ODC1Q03028 310 aa3.8□□□□□ -1.8
USB1YLR132C AIM32Q04689 311 aa3.8□□□□□ -1.8
USB1YLR132C BEM1P29366 551 aa3.79□□□□□ -1.8
USB1YLR132C DHH1P39517 506 aaKnown RBP3.79□□□□□ -1.8
USB1YLR132C HAT2P39984 401 aa3.79□□□□□ -1.8
USB1YLR132C YJL213WP40896 331 aa3.79□□□□□ -1.8
USB1YLR132C YIP1P53039 248 aa3.79□□□□□ -1.8
USB1YLR132C PIR3Q03180 325 aa3.79□□□□□ -1.8
USB1YLR132C AYT1Q12226 474 aa3.79□□□□□ -1.8
USB1YLR132C FLO11P08640 1367 aa3.78□□□□□ -1.8
USB1YLR132C HIP1P06775 603 aa3.78□□□□□ -1.8
USB1YLR132C ERV1P27882 189 aa3.78□□□□□ -1.8
USB1YLR132C SIN4P32259 974 aa3.78□□□□□ -1.8
USB1YLR132C ECM25P32525 599 aa3.78□□□□□ -1.8
USB1YLR132C CCT2P39076 527 aaKnown RBP3.78□□□□□ -1.8
USB1YLR132C RPR2P40571 144 aa3.78□□□□□ -1.8
USB1YLR132C POP6P53218 158 aa3.78□□□□□ -1.8
USB1YLR132C DIS3Q08162 1001 aaKnown RBP3.78□□□□□ -1.8
USB1YLR132C CTF3Q12748 733 aa3.78□□□□□ -1.8
USB1YLR132C GDH1P07262 454 aaKnown RBP3.77□□□□□ -1.81
USB1YLR132C SPO7P18410 259 aa3.77□□□□□ -1.81
USB1YLR132C PUT3P25502 979 aaPredicted RBP3.77□□□□□ -1.81
USB1YLR132C GLC7P32598 312 aaKnown RBP3.77□□□□□ -1.81
USB1YLR132C YCR041WP37265 110 aa3.77□□□□□ -1.81
USB1YLR132C SLM4P38247 162 aa3.77□□□□□ -1.81
USB1YLR132C RRT2P38332 387 aa3.77□□□□□ -1.81
USB1YLR132C SAS2P40963 338 aa3.77□□□□□ -1.81
USB1YLR132C YFL067WP43537 175 aa3.77□□□□□ -1.81
USB1YLR132C YJL132WP47014 750 aa3.77□□□□□ -1.81
USB1YLR132C RSC1P53236 928 aa3.77□□□□□ -1.81
USB1YLR132C ACL4Q03771 387 aa3.77□□□□□ -1.81
USB1YLR132C DCS1Q06151 350 aa3.77□□□□□ -1.81
USB1YLR132C SGT1Q08446 395 aa3.77□□□□□ -1.81
USB1YLR132C YPL199CQ08954 240 aa3.77□□□□□ -1.81
USB1YLR132C AEP3Q12089 606 aa3.77□□□□□ -1.81
USB1YLR132C ISN1Q99312 450 aa3.77□□□□□ -1.81
USB1YLR132C ARG4P04076 463 aaPredicted RBP3.76□□□□□ -1.81
USB1YLR132C HOM3P10869 527 aa3.76□□□□□ -1.81
USB1YLR132C CPR1P14832 162 aaKnown RBP3.76□□□□□ -1.81
USB1YLR132C CLN1P20437 546 aa3.76□□□□□ -1.81
USB1YLR132C MCK1P21965 375 aaKnown RBP3.76□□□□□ -1.81
USB1YLR132C YCR022CP25620 114 aa3.76□□□□□ -1.81
USB1YLR132C LYS1P38998 373 aaRIP-Chip data3.76□□□□□ -1.81not detected
USB1YLR132C TRS85P46944 698 aa3.76□□□□□ -1.81
USB1YLR132C YDL186WP48568 277 aa3.76□□□□□ -1.81
USB1YLR132C AVT4P50944 713 aa3.76□□□□□ -1.81
USB1YLR132C YGR111WP53265 400 aa3.76□□□□□ -1.81
USB1YLR132C RPT4P53549 437 aaKnown RBP3.76□□□□□ -1.81
USB1YLR132C MRP51Q02950 344 aa3.76□□□□□ -1.81
USB1YLR132C GIP3Q03016 1276 aa3.76□□□□□ -1.81
USB1YLR132C UBX2Q04228 584 aa3.76□□□□□ -1.81
USB1YLR132C GYL1Q04322 720 aa3.76□□□□□ -1.81
USB1YLR132C YLR345WQ06137 509 aa3.76□□□□□ -1.81
USB1YLR132C DCI1Q08558 271 aa3.76□□□□□ -1.81
USB1YLR132C RKM1Q08961 583 aaPredicted RBP3.76□□□□□ -1.81
USB1YLR132C YLL056CQ12177 298 aa3.76□□□□□ -1.81
USB1YLR132C RRD2Q12461 358 aa3.76□□□□□ -1.81
USB1YLR132C SCEIP03882 235 aa3.75□□□□□ -1.81
USB1YLR132C SNT1P25357 1226 aa3.75□□□□□ -1.81
USB1YLR132C MRP4P32902 394 aa3.75□□□□□ -1.81
USB1YLR132C RRN10P38204 145 aa3.75□□□□□ -1.81
USB1YLR132C YJL055WP47044 245 aa3.75□□□□□ -1.81
USB1YLR132C HMS2P47175 358 aa3.75□□□□□ -1.81
USB1YLR132C TCB2P48231 1178 aa3.75□□□□□ -1.81
USB1YLR132C COS10P52924 374 aa3.75□□□□□ -1.81
USB1YLR132C MMR1Q06324 491 aa3.75□□□□□ -1.81
USB1YLR132C TIM18Q08749 192 aa3.75□□□□□ -1.81
USB1YLR132C PKH2Q12236 1081 aaKnown RBP3.75□□□□□ -1.81
USB1YLR132C MTR10Q99189 972 aa3.75□□□□□ -1.81
USB1YLR132C DUR1,2P32528 1835 aaKnown RBP3.74□□□□□ -1.81
USB1YLR132C ATS1P31386 333 aa3.74□□□□□ -1.81
USB1YLR132C LTV1P34078 463 aa3.74□□□□□ -1.81
USB1YLR132C NAT2P37293 288 aa3.74□□□□□ -1.81
USB1YLR132C PCA1P38360 1216 aa3.74□□□□□ -1.81
USB1YLR132C LAM5P43560 674 aa3.74□□□□□ -1.81
USB1YLR132C FRE4P53746 719 aa3.74□□□□□ -1.81
USB1YLR132C IBD2P53892 351 aa3.74□□□□□ -1.81
USB1YLR132C PRP42Q03776 544 aaKnown RBP3.74□□□□□ -1.81
USB1YLR132C YBR298C-AQ8TGK4 73 aa3.74□□□□□ -1.81
USB1YLR132C FLO1P32768 1537 aa3.74□□□□□ -1.81
USB1YLR132C HEM2P05373 342 aa3.73□□□□□ -1.81
USB1YLR132C SAM1P10659 382 aaKnown RBP3.73□□□□□ -1.81
USB1YLR132C SEC63P14906 663 aa3.73□□□□□ -1.81
USB1YLR132C SAM2P19358 384 aaKnown RBP3.73□□□□□ -1.81
USB1YLR132C SPS22P25380 463 aa3.73□□□□□ -1.81
USB1YLR132C TIP1P27654 210 aaPredicted RBP3.73□□□□□ -1.81
USB1YLR132C SOR1P35497 357 aaKnown RBP3.73□□□□□ -1.81
USB1YLR132C RFC3P38629 340 aa3.73□□□□□ -1.81
USB1YLR132C LRP1P38801 184 aaKnown RBP3.73□□□□□ -1.81
USB1YLR132C SPL2P38839 148 aa3.73□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms