RNA–Protein interactions for RNA: YKL012W

PRP40, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP40, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP40YKL012W VTI1Q04338 217 aa5.28□□□□□ -1.56
PRP40YKL012W RNH203Q12338 110 aa5.28□□□□□ -1.56
PRP40YKL012W CSR2Q12734 1121 aa5.28□□□□□ -1.56
PRP40YKL012W ESP1Q03018 1630 aa5.28□□□□□ -1.56
PRP40YKL012W DST1P07273 309 aa5.27□□□□□ -1.57
PRP40YKL012W YBL028CP38202 106 aa5.27□□□□□ -1.57
PRP40YKL012W ARK1P53974 638 aa5.27□□□□□ -1.57
PRP40YKL012W MMT1Q03218 510 aa5.27□□□□□ -1.57
PRP40YKL012W DSE3Q08729 430 aa5.27□□□□□ -1.57
PRP40YKL012W LSB5P25369 354 aa5.27□□□□□ -1.57
PRP40YKL012W PSO2P30620 661 aa5.27□□□□□ -1.57
PRP40YKL012W RGT1P32862 1170 aa5.27□□□□□ -1.57
PRP40YKL012W YIL152WP40455 235 aa5.27□□□□□ -1.57
PRP40YKL012W YNR048WP53740 393 aa5.27□□□□□ -1.57
PRP40YKL012W RSN1Q03516 953 aa5.27□□□□□ -1.57
PRP40YKL012W NUP53Q03790 475 aa5.27□□□□□ -1.57
PRP40YKL012W YPR022CQ12139 1133 aa5.27□□□□□ -1.57
PRP40YKL012W SAG1P20840 650 aa5.26□□□□□ -1.57
PRP40YKL012W GCD10P41814 478 aa5.26□□□□□ -1.57
PRP40YKL012W HST1P53685 503 aa5.26□□□□□ -1.57
PRP40YKL012W RPM2Q02773 1202 aa5.26□□□□□ -1.57
PRP40YKL012W URC2Q04411 772 aa5.26□□□□□ -1.57
PRP40YKL012W ECM7Q06200 448 aa5.26□□□□□ -1.57
PRP40YKL012W ARG4P04076 463 aaPredicted RBP5.25□□□□□ -1.57
PRP40YKL012W RPL12AP0CX53 165 aaKnown RBP5.25□□□□□ -1.57
PRP40YKL012W RPL12BP0CX54 165 aa5.25□□□□□ -1.57
PRP40YKL012W PRP16P15938 1071 aaPredicted RBP5.25□□□□□ -1.57
PRP40YKL012W PTP1P25044 335 aa5.25□□□□□ -1.57
PRP40YKL012W ASK1P35734 292 aa5.25□□□□□ -1.57
PRP40YKL012W YHR177WP38867 453 aa5.25□□□□□ -1.57
PRP40YKL012W DIM1P41819 318 aaKnown RBP5.25□□□□□ -1.57
PRP40YKL012W PHB2P50085 310 aa5.25□□□□□ -1.57
PRP40YKL012W STD1Q02794 444 aa5.25□□□□□ -1.57
PRP40YKL012W YMR034CQ05131 434 aaPredicted RBP5.25□□□□□ -1.57
PRP40YKL012W RRP9Q06506 573 aaKnown RBP5.25□□□□□ -1.57
PRP40YKL012W AAD15Q08361 143 aa5.25□□□□□ -1.57
PRP40YKL012W RPC40P07703 335 aaKnown RBP5.24□□□□□ -1.57
PRP40YKL012W SPO12P17123 173 aa5.24□□□□□ -1.57
PRP40YKL012W HAT2P39984 401 aa5.24□□□□□ -1.57
PRP40YKL012W ERV25P54837 211 aaKnown RBP5.24□□□□□ -1.57
PRP40YKL012W SMA2Q04658 369 aa5.24□□□□□ -1.57
PRP40YKL012W YCR022CP25620 114 aa5.24□□□□□ -1.57
PRP40YKL012W SKN1P33336 771 aa5.24□□□□□ -1.57
PRP40YKL012W PTK1P36002 662 aaPredicted RBP5.24□□□□□ -1.57
PRP40YKL012W IKS1P47042 667 aa5.24□□□□□ -1.57
PRP40YKL012W PMT5P52867 743 aa5.24□□□□□ -1.57
PRP40YKL012W DIG1Q03063 452 aaKnown RBP5.24□□□□□ -1.57
PRP40YKL012W BET5Q03630 159 aa5.24□□□□□ -1.57
PRP40YKL012W YLR281CQ05863 155 aa5.24□□□□□ -1.57
PRP40YKL012W SRL2Q12020 392 aa5.24□□□□□ -1.57
PRP40YKL012W THR4P16120 514 aaKnown RBP5.23□□□□□ -1.57
PRP40YKL012W TIP1P27654 210 aaPredicted RBP5.23□□□□□ -1.57
PRP40YKL012W GLC7P32598 312 aaKnown RBP5.23□□□□□ -1.57
PRP40YKL012W TRS65P32893 560 aa5.23□□□□□ -1.57
PRP40YKL012W MPS1P54199 764 aa5.23□□□□□ -1.57
PRP40YKL012W VPS20Q04272 221 aa5.23□□□□□ -1.57
PRP40YKL012W TIM18Q08749 192 aa5.23□□□□□ -1.57
PRP40YKL012W TEF1P02994 458 aaKnown RBP5.22□□□□□ -1.57
PRP40YKL012W OPI3P05375 206 aa5.22□□□□□ -1.57
PRP40YKL012W SLM5P25345 492 aaKnown RBP5.22□□□□□ -1.57
PRP40YKL012W DAL80P26343 269 aa5.22□□□□□ -1.57
PRP40YKL012W ITR1P30605 584 aa5.22□□□□□ -1.57
PRP40YKL012W YBR056WP38081 501 aa5.22□□□□□ -1.57
PRP40YKL012W LIN1P38852 340 aaPredicted RBP5.22□□□□□ -1.57
PRP40YKL012W SHO1P40073 367 aa5.22□□□□□ -1.57
PRP40YKL012W MKT1P40850 830 aaKnown RBP5.22□□□□□ -1.57
PRP40YKL012W RRT5P43607 289 aa5.22□□□□□ -1.57
PRP40YKL012W SSN8P47821 323 aa5.22□□□□□ -1.57
PRP40YKL012W AVT4P50944 713 aa5.22□□□□□ -1.57
PRP40YKL012W MRP51Q02950 344 aa5.22□□□□□ -1.57
PRP40YKL012W PEX27Q08580 376 aa5.22□□□□□ -1.57
PRP40YKL012W YOR012WQ12351 137 aa5.22□□□□□ -1.57
PRP40YKL012W ATG2P53855 1592 aa5.22□□□□□ -1.57
PRP40YKL012W TAF2P23255 1407 aa5.22□□□□□ -1.57
PRP40YKL012W PTR2P32901 601 aa5.21□□□□□ -1.57
PRP40YKL012W ARC40P38328 384 aaKnown RBP5.21□□□□□ -1.57
PRP40YKL012W MMF1P40185 145 aaKnown RBP5.21□□□□□ -1.57
PRP40YKL012W SCW4P53334 386 aaKnown RBP5.21□□□□□ -1.57
PRP40YKL012W ABZ2Q03266 374 aa5.21□□□□□ -1.57
PRP40YKL012W GEP3Q08622 556 aa5.21□□□□□ -1.57
PRP40YKL012W MYO2P19524 1574 aaKnown RBP5.21□□□□□ -1.58
PRP40YKL012W CHD1P32657 1468 aa5.21□□□□□ -1.58
PRP40YKL012W DBP3P20447 523 aaKnown RBP5.21□□□□□ -1.58
PRP40YKL012W ATO2P32907 282 aa5.21□□□□□ -1.58
PRP40YKL012W SPT10P35208 640 aa5.21□□□□□ -1.58
PRP40YKL012W DHH1P39517 506 aaKnown RBP5.21□□□□□ -1.58
PRP40YKL012W MST28P39552 234 aa5.21□□□□□ -1.58
PRP40YKL012W STE24P47154 453 aa5.21□□□□□ -1.58
PRP40YKL012W POP6P53218 158 aa5.21□□□□□ -1.58
PRP40YKL012W RRP46P53256 223 aaPredicted RBP5.21□□□□□ -1.58
PRP40YKL012W FMP42Q04991 504 aa5.21□□□□□ -1.58
PRP40YKL012W HCR1Q05775 265 aaKnown RBP5.21□□□□□ -1.58
PRP40YKL012W MUM3Q08750 479 aa5.21□□□□□ -1.58
PRP40YKL012W PKH2Q12236 1081 aaKnown RBP5.21□□□□□ -1.58
PRP40YKL012W NDC1P32500 655 aa5.2□□□□□ -1.58
PRP40YKL012W LAM5P43560 674 aa5.2□□□□□ -1.58
PRP40YKL012W ARP5P53946 755 aa5.2□□□□□ -1.58
PRP40YKL012W SKI3P17883 1432 aaKnown RBP5.2□□□□□ -1.58
PRP40YKL012W MMS22Q06164 1454 aa5.2□□□□□ -1.58
PRP40YKL012W CBP2P03874 630 aaPredicted RBP5.19□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms