RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C CUE5Q08412 411 aaKnown RBP2.17□□□□□ -2.06
SMB1YER029C HSP42Q12329 375 aa2.17□□□□□ -2.06
SMB1YER029C IMA3P0CW40 589 aa2.16□□□□□ -2.06
SMB1YER029C IMA4P0CW41 589 aa2.16□□□□□ -2.06
SMB1YER029C HSP26P15992 214 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
SMB1YER029C NTC20P38302 140 aaPredicted RBP2.16□□□□□ -2.06
SMB1YER029C RRP4P38792 359 aaKnown RBP2.16□□□□□ -2.06
SMB1YER029C SBE22P38814 852 aa2.16□□□□□ -2.06
SMB1YER029C BNI5P53890 448 aaKnown RBP2.16□□□□□ -2.06
SMB1YER029C HAL1Q01766 294 aa2.16□□□□□ -2.06
SMB1YER029C OAZ1Q02803 292 aa2.16□□□□□ -2.06
SMB1YER029C YMR155WQ03795 547 aa2.16□□□□□ -2.06
SMB1YER029C YDR131CQ03899 556 aa2.16□□□□□ -2.06
SMB1YER029C ROY1Q04847 553 aa2.16□□□□□ -2.06
SMB1YER029C IMA2Q08295 589 aa2.16□□□□□ -2.06
SMB1YER029C PLP2Q12017 286 aa2.16□□□□□ -2.06
SMB1YER029C YRM1Q12340 786 aa2.16□□□□□ -2.06
SMB1YER029C SFI1Q12369 946 aa2.16□□□□□ -2.06
SMB1YER029C SNU66Q12420 587 aaPredicted RBP2.16□□□□□ -2.06
SMB1YER029C YDL012CQ12489 107 aa2.16□□□□□ -2.06
SMB1YER029C ADE4P04046 510 aaKnown RBP2.15□□□□□ -2.07
SMB1YER029C YCR051WP25631 222 aa2.15□□□□□ -2.07
SMB1YER029C URA7P28274 579 aaKnown RBP2.15□□□□□ -2.07
SMB1YER029C PHA2P32452 334 aa2.15□□□□□ -2.07
SMB1YER029C MRPL10P36520 322 aa2.15□□□□□ -2.07
SMB1YER029C MRP21P38175 177 aa2.15□□□□□ -2.07
SMB1YER029C RRN10P38204 145 aa2.15□□□□□ -2.07
SMB1YER029C AIM10P39965 576 aaKnown RBP2.15□□□□□ -2.07
SMB1YER029C MDE1P47095 244 aa2.15□□□□□ -2.07
SMB1YER029C SRB7P47822 140 aa2.15□□□□□ -2.07
SMB1YER029C MDG1P53885 366 aa2.15□□□□□ -2.07
SMB1YER029C KAP120Q02932 1032 aa2.15□□□□□ -2.07
SMB1YER029C ACL4Q03771 387 aa2.15□□□□□ -2.07
SMB1YER029C DIS3Q08162 1001 aaKnown RBP2.15□□□□□ -2.07
SMB1YER029C RAX1Q08760 435 aa2.15□□□□□ -2.07
SMB1YER029C ATG34Q12292 412 aa2.15□□□□□ -2.07
SMB1YER029C TY1B-AO13527 1196 aaKnown RBP2.14□□□□□ -2.07
SMB1YER029C URA4P20051 364 aa2.14□□□□□ -2.07
SMB1YER029C CLN1P20437 546 aa2.14□□□□□ -2.07
SMB1YER029C NAB3P38996 802 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
SMB1YER029C YPS6P40583 537 aa2.14□□□□□ -2.07
SMB1YER029C CHS6P40955 746 aa2.14□□□□□ -2.07
SMB1YER029C COS1P53822 381 aa2.14□□□□□ -2.07
SMB1YER029C OCA2P53949 197 aa2.14□□□□□ -2.07
SMB1YER029C DON1Q05610 365 aa2.14□□□□□ -2.07
SMB1YER029C DCS1Q06151 350 aa2.14□□□□□ -2.07
SMB1YER029C MMR1Q06324 491 aa2.14□□□□□ -2.07
SMB1YER029C IZH2Q12442 317 aa2.14□□□□□ -2.07
SMB1YER029C SPO7P18410 259 aa2.13□□□□□ -2.07
SMB1YER029C ADK2P26364 225 aa2.13□□□□□ -2.07
SMB1YER029C CHK1P38147 527 aa2.13□□□□□ -2.07
SMB1YER029C PTI1P39927 425 aaPredicted RBP2.13□□□□□ -2.07
SMB1YER029C NUP116Q02630 1113 aa2.13□□□□□ -2.07
SMB1YER029C RRP9Q06506 573 aaKnown RBP2.13□□□□□ -2.07
SMB1YER029C TPT1Q12272 230 aaKnown RBP2.13□□□□□ -2.07
SMB1YER029C AFI1Q99222 893 aa2.13□□□□□ -2.07
SMB1YER029C INH1P01097 85 aa2.12□□□□□ -2.07
SMB1YER029C MSI1P13712 422 aa2.12□□□□□ -2.07
SMB1YER029C RPC53P25441 422 aa2.12□□□□□ -2.07
SMB1YER029C YCL068CP25593 260 aa2.12□□□□□ -2.07
SMB1YER029C RRP1P35178 278 aaPredicted RBP2.12□□□□□ -2.07
SMB1YER029C BYE1P36106 594 aa2.12□□□□□ -2.07
SMB1YER029C SLM4P38247 162 aa2.12□□□□□ -2.07
SMB1YER029C MIG3P39943 394 aa2.12□□□□□ -2.07
SMB1YER029C VPS72Q03388 795 aa2.12□□□□□ -2.07
SMB1YER029C RPN9Q04062 393 aaKnown RBP2.12□□□□□ -2.07
SMB1YER029C YMR130WQ04223 302 aa2.12□□□□□ -2.07
SMB1YER029C YLR345WQ06137 509 aa2.12□□□□□ -2.07
SMB1YER029C MDM36Q06820 579 aa2.12□□□□□ -2.07
SMB1YER029C RRG1Q12167 365 aaPredicted RBP2.12□□□□□ -2.07
SMB1YER029C BUG1Q12191 341 aa2.12□□□□□ -2.07
SMB1YER029C ARO3P14843 370 aaKnown RBP2.11□□□□□ -2.07
SMB1YER029C BRF1P29056 596 aa2.11□□□□□ -2.07
SMB1YER029C DPH5P32469 300 aaPredicted RBP2.11□□□□□ -2.07
SMB1YER029C YKL097CP34245 136 aa2.11□□□□□ -2.07
SMB1YER029C HEL1P36113 551 aa2.11□□□□□ -2.07
SMB1YER029C MMS4P38257 691 aa2.11□□□□□ -2.07
SMB1YER029C BAT1P38891 393 aaKnown RBP2.11□□□□□ -2.07
SMB1YER029C SER3P40054 469 aa2.11□□□□□ -2.07
SMB1YER029C TCB2P48231 1178 aa2.11□□□□□ -2.07
SMB1YER029C BNS1P50084 137 aa2.11□□□□□ -2.07
SMB1YER029C MRM2P53123 320 aa2.11□□□□□ -2.07
SMB1YER029C RPT4P53549 437 aaKnown RBP2.11□□□□□ -2.07
SMB1YER029C MTQ1P53944 314 aa2.11□□□□□ -2.07
SMB1YER029C ERB1Q04660 807 aaKnown RBP2.11□□□□□ -2.07
SMB1YER029C SMF3Q12078 473 aaPredicted RBP2.11□□□□□ -2.07
SMB1YER029C YGK3Q12222 375 aaPredicted RBP2.11□□□□□ -2.07
SMB1YER029C JID1Q12350 301 aa2.11□□□□□ -2.07
SMB1YER029C CCH1P50077 2039 aa2.11□□□□□ -2.07
SMB1YER029C FUR1P18562 216 aaKnown RBP2.1□□□□□ -2.07
SMB1YER029C REC107P21651 314 aa2.1□□□□□ -2.07
SMB1YER029C ERV1P27882 189 aa2.1□□□□□ -2.07
SMB1YER029C SPT10P35208 640 aa2.1□□□□□ -2.07
SMB1YER029C ANR2P36090 516 aaPredicted RBP2.1□□□□□ -2.07
SMB1YER029C RTC2P38279 296 aa2.1□□□□□ -2.07
SMB1YER029C STP2P38704 541 aa2.1□□□□□ -2.07
SMB1YER029C YHK8P38776 514 aa2.1□□□□□ -2.07
SMB1YER029C ALD5P40047 520 aaKnown RBP2.1□□□□□ -2.07
SMB1YER029C GAT2P40209 560 aa2.1□□□□□ -2.07
SMB1YER029C VHS2P40463 436 aa2.1□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms