RNA–Protein interactions for RNA: YDR235W

PRP42, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP42, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP42YDR235W BEM1P29366 551 aa0.64□□□□□ -2.31
PRP42YDR235W SAS3P34218 831 aa0.64□□□□□ -2.31
PRP42YDR235W BAT1P38891 393 aaKnown RBP0.64□□□□□ -2.31
PRP42YDR235W JLP2P40206 208 aa0.64□□□□□ -2.31
PRP42YDR235W YIL029CP40538 142 aa0.64□□□□□ -2.31
PRP42YDR235W RPS0BP46654 252 aaKnown RBP0.64□□□□□ -2.31
PRP42YDR235W DLD2P46681 530 aaKnown RBP0.64□□□□□ -2.31
PRP42YDR235W FMS1P50264 508 aa0.64□□□□□ -2.31
PRP42YDR235W RHO5P53879 331 aaKnown RBP0.64□□□□□ -2.31
PRP42YDR235W MTQ1P53944 314 aa0.64□□□□□ -2.31
PRP42YDR235W RPA49Q01080 415 aaPredicted RBP0.64□□□□□ -2.31
PRP42YDR235W YDL121CQ07541 149 aa0.64□□□□□ -2.31
PRP42YDR235W SKI7Q08491 747 aaPredicted RBP0.64□□□□□ -2.31
PRP42YDR235W HSP42Q12329 375 aa0.64□□□□□ -2.31
PRP42YDR235W JID1Q12350 301 aa0.64□□□□□ -2.31
PRP42YDR235W RMD5Q12508 421 aa0.64□□□□□ -2.31
PRP42YDR235W RTP1Q12751 981 aa0.64□□□□□ -2.31
PRP42YDR235W SPO12P17123 173 aa0.64□□□□□ -2.31
PRP42YDR235W RAD57P25301 460 aa0.64□□□□□ -2.31
PRP42YDR235W SIN4P32259 974 aa0.64□□□□□ -2.31
PRP42YDR235W SOR1P35497 357 aaKnown RBP0.64□□□□□ -2.31
PRP42YDR235W NTC20P38302 140 aaPredicted RBP0.64□□□□□ -2.31
PRP42YDR235W RFC3P38629 340 aa0.64□□□□□ -2.31
PRP42YDR235W UTP9P38882 575 aaKnown RBP0.64□□□□□ -2.31
PRP42YDR235W PCF11P39081 626 aaPredicted RBP0.64□□□□□ -2.31
PRP42YDR235W NDE1P40215 560 aa0.64□□□□□ -2.31
PRP42YDR235W IRC6P43615 237 aa0.64□□□□□ -2.31
PRP42YDR235W YFR057WP43625 151 aa0.64□□□□□ -2.31
PRP42YDR235W YPS5P53057 165 aa0.64□□□□□ -2.31
PRP42YDR235W YGL138CP53122 345 aa0.64□□□□□ -2.31
PRP42YDR235W MRPL19P53875 158 aa0.64□□□□□ -2.31
PRP42YDR235W GPI15P53961 229 aa0.64□□□□□ -2.31
PRP42YDR235W YPL107WQ02873 248 aa0.64□□□□□ -2.31
PRP42YDR235W GIP3Q03016 1276 aa0.64□□□□□ -2.31
PRP42YDR235W BCH1Q05029 724 aa0.64□□□□□ -2.31
PRP42YDR235W RRP45Q05636 305 aaKnown RBP0.64□□□□□ -2.31
PRP42YDR235W MDM30Q05930 598 aa0.64□□□□□ -2.31
PRP42YDR235W PIN3Q06449 215 aa0.64□□□□□ -2.31
PRP42YDR235W SOR2Q07786 357 aa0.64□□□□□ -2.31
PRP42YDR235W SLF1Q12034 447 aaKnown RBP0.64□□□□□ -2.31
PRP42YDR235W VAM3Q12241 283 aa0.64□□□□□ -2.31
PRP42YDR235W RRI2Q12348 645 aa0.64□□□□□ -2.31
PRP42YDR235W RTN2Q12443 393 aa0.64□□□□□ -2.31
PRP42YDR235W HOM3P10869 527 aa0.63□□□□□ -2.31
PRP42YDR235W RED1P14291 827 aa0.63□□□□□ -2.31
PRP42YDR235W CLC1P17891 233 aa0.63□□□□□ -2.31
PRP42YDR235W CLB3P24870 427 aa0.63□□□□□ -2.31
PRP42YDR235W KRE2P27809 442 aa0.63□□□□□ -2.31
PRP42YDR235W TPS2P31688 896 aaKnown RBP0.63□□□□□ -2.31
PRP42YDR235W YME2P32843 850 aa0.63□□□□□ -2.31
PRP42YDR235W PTK1P36002 662 aaPredicted RBP0.63□□□□□ -2.31
PRP42YDR235W PRY2P36110 329 aa0.63□□□□□ -2.31
PRP42YDR235W APE3P37302 537 aaKnown RBP0.63□□□□□ -2.31
PRP42YDR235W YBR056WP38081 501 aa0.63□□□□□ -2.31
PRP42YDR235W MMS4P38257 691 aa0.63□□□□□ -2.31
PRP42YDR235W RRP4P38792 359 aaKnown RBP0.63□□□□□ -2.31
PRP42YDR235W COX14P39103 70 aa0.63□□□□□ -2.31
PRP42YDR235W YAL037WP39728 267 aa0.63□□□□□ -2.31
PRP42YDR235W OXA1P39952 402 aa0.63□□□□□ -2.31
PRP42YDR235W ALD5P40047 520 aaKnown RBP0.63□□□□□ -2.31
PRP42YDR235W SEC9P40357 651 aa0.63□□□□□ -2.31
PRP42YDR235W SFH5P47008 294 aa0.63□□□□□ -2.31
PRP42YDR235W BIR1P47134 954 aa0.63□□□□□ -2.31
PRP42YDR235W COS5P47187 383 aa0.63□□□□□ -2.31
PRP42YDR235W CCE1Q03702 353 aa0.63□□□□□ -2.31
PRP42YDR235W RIF2Q06208 395 aa0.63□□□□□ -2.31
PRP42YDR235W YPR195CQ06594 109 aa0.63□□□□□ -2.31
PRP42YDR235W TSR2Q06672 205 aaKnown RBP0.63□□□□□ -2.31
PRP42YDR235W COS7Q07788 383 aa0.63□□□□□ -2.31
PRP42YDR235W DIS3Q08162 1001 aaKnown RBP0.63□□□□□ -2.31
PRP42YDR235W SRL2Q12020 392 aa0.63□□□□□ -2.31
PRP42YDR235W YOL159C-AQ3E769 90 aa0.63□□□□□ -2.31
PRP42YDR235W INH1P01097 85 aa0.62□□□□□ -2.31
PRP42YDR235W SCEIP03882 235 aa0.62□□□□□ -2.31
PRP42YDR235W MSI1P13712 422 aa0.62□□□□□ -2.31
PRP42YDR235W REC107P21651 314 aa0.62□□□□□ -2.31
PRP42YDR235W YCL068CP25593 260 aa0.62□□□□□ -2.31
PRP42YDR235W PRR1P28708 518 aa0.62□□□□□ -2.31
PRP42YDR235W RRP1P35178 278 aaPredicted RBP0.62□□□□□ -2.31
PRP42YDR235W RRN10P38204 145 aa0.62□□□□□ -2.31
PRP42YDR235W SBE22P38814 852 aa0.62□□□□□ -2.31
PRP42YDR235W HAC1P41546 238 aa0.62□□□□□ -2.31
PRP42YDR235W GPD2P41911 440 aaKnown RBP0.62□□□□□ -2.31
PRP42YDR235W PHO86P46956 311 aa0.62□□□□□ -2.31
PRP42YDR235W AIM24P47127 394 aa0.62□□□□□ -2.31
PRP42YDR235W YGL262WP53054 175 aa0.62□□□□□ -2.31
PRP42YDR235W MRM2P53123 320 aa0.62□□□□□ -2.31
PRP42YDR235W TPS1Q00764 495 aaKnown RBP0.62□□□□□ -2.31
PRP42YDR235W SKO1Q02100 647 aa0.62□□□□□ -2.31
PRP42YDR235W TAF12Q03761 539 aa0.62□□□□□ -2.31
PRP42YDR235W ARX1Q03862 593 aaKnown RBP0.62□□□□□ -2.31
PRP42YDR235W TAF11Q04226 346 aa0.62□□□□□ -2.31
PRP42YDR235W RTN1Q04947 295 aaKnown RBP0.62□□□□□ -2.31
PRP42YDR235W COG4Q06096 861 aa0.62□□□□□ -2.31
PRP42YDR235W MCH1Q07376 486 aa0.62□□□□□ -2.31
PRP42YDR235W BUD21Q08492 214 aaPredicted RBP0.62□□□□□ -2.31
PRP42YDR235W RAX1Q08760 435 aa0.62□□□□□ -2.31
PRP42YDR235W RKM1Q08961 583 aaPredicted RBP0.62□□□□□ -2.31
PRP42YDR235W SMF3Q12078 473 aaPredicted RBP0.62□□□□□ -2.31
PRP42YDR235W BUG1Q12191 341 aa0.62□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms