RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM1	YDR120C	PRP42	Q03776	544 aa	Known RBP	3.93	□□□□□ -1.78
TRM1	YDR120C	SXM1	Q04175	944 aa	Known RBP	3.93	□□□□□ -1.78
TRM1	YDR120C	ERP1	Q05359	219 aa	Known RBP	3.93	□□□□□ -1.78
TRM1	YDR120C	DCS1	Q06151	350 aa		3.93	□□□□□ -1.78
TRM1	YDR120C	DIS3	Q08162	1001 aa	Known RBP	3.93	□□□□□ -1.78
TRM1	YDR120C	MED2	Q12124	431 aa		3.93	□□□□□ -1.78
TRM1	YDR120C	SPO7	P18410	259 aa		3.92	□□□□□ -1.78
TRM1	YDR120C	ECM25	P32525	599 aa		3.92	□□□□□ -1.78
TRM1	YDR120C	RSM22	P36056	628 aa		3.92	□□□□□ -1.78
TRM1	YDR120C	MTC4	P38335	694 aa	Known RBP	3.92	□□□□□ -1.78
TRM1	YDR120C	YHR054C	P38780	354 aa		3.92	□□□□□ -1.78
TRM1	YDR120C	RPR2	P40571	144 aa		3.92	□□□□□ -1.78
TRM1	YDR120C	LCB2	P40970	561 aa		3.92	□□□□□ -1.78
TRM1	YDR120C	GCD10	P41814	478 aa		3.92	□□□□□ -1.78
TRM1	YDR120C	TOM22	P49334	152 aa		3.92	□□□□□ -1.78
TRM1	YDR120C	PCP1	P53259	346 aa		3.92	□□□□□ -1.78
TRM1	YDR120C	YIF1	P53845	314 aa	Known RBP	3.92	□□□□□ -1.78
TRM1	YDR120C	PNG1	Q02890	363 aa		3.92	□□□□□ -1.78
TRM1	YDR120C	GYL1	Q04322	720 aa		3.92	□□□□□ -1.78
TRM1	YDR120C	HEL2	Q05580	639 aa	Known RBP	3.92	□□□□□ -1.78
TRM1	YDR120C	AYT1	Q12226	474 aa		3.92	□□□□□ -1.78
TRM1	YDR120C	FLO11	P08640	1367 aa		3.92	□□□□□ -1.78
TRM1	YDR120C	CYB2	P00175	591 aa		3.92	□□□□□ -1.78
TRM1	YDR120C	HSP82	P02829	709 aa	Known RBP	3.92	□□□□□ -1.78
TRM1	YDR120C	SCEI	P03882	235 aa		3.92	□□□□□ -1.78
TRM1	YDR120C	RPI1	P23250	407 aa	Known RBP	3.92	□□□□□ -1.78
TRM1	YDR120C	APE2	P32454	952 aa	Known RBP	3.92	□□□□□ -1.78
TRM1	YDR120C	LOS1	P33418	1100 aa	Predicted RBP	3.92	□□□□□ -1.78
TRM1	YDR120C	SPL2	P38839	148 aa		3.92	□□□□□ -1.78
TRM1	YDR120C	UAF30	Q08747	228 aa		3.92	□□□□□ -1.78
TRM1	YDR120C	SPE3	Q12074	293 aa	Known RBP	3.92	□□□□□ -1.78
TRM1	YDR120C	SWI1	P09547	1314 aa		3.91	□□□□□ -1.78
TRM1	YDR120C	TY1B-A	O13527	1196 aa	Known RBP	3.91	□□□□□ -1.78
TRM1	YDR120C	MNE1	P24720	663 aa		3.91	□□□□□ -1.78
TRM1	YDR120C	YCR100C	P25606	316 aa		3.91	□□□□□ -1.78
TRM1	YDR120C	LTV1	P34078	463 aa		3.91	□□□□□ -1.78
TRM1	YDR120C	SOR1	P35497	357 aa	Known RBP	3.91	□□□□□ -1.78
TRM1	YDR120C	RTT107	P38850	1070 aa		3.91	□□□□□ -1.78
TRM1	YDR120C	DHH1	P39517	506 aa	Known RBP	3.91	□□□□□ -1.78
TRM1	YDR120C	ALG8	P40351	577 aa		3.91	□□□□□ -1.78
TRM1	YDR120C	YJL132W	P47014	750 aa		3.91	□□□□□ -1.78
TRM1	YDR120C	YIP1	P53039	248 aa		3.91	□□□□□ -1.78
TRM1	YDR120C	OCA2	P53949	197 aa		3.91	□□□□□ -1.78
TRM1	YDR120C	SOR2	Q07786	357 aa		3.91	□□□□□ -1.78
TRM1	YDR120C	NDD1	Q08887	554 aa		3.91	□□□□□ -1.78
TRM1	YDR120C	PAR32	Q12515	295 aa	Known RBP	3.91	□□□□□ -1.78
TRM1	YDR120C	SET6	Q12529	373 aa		3.91	□□□□□ -1.78
TRM1	YDR120C	SAC3	P46674	1301 aa		3.9	□□□□□ -1.78
TRM1	YDR120C	HIS4	P00815	799 aa	Known RBP	3.9	□□□□□ -1.78
TRM1	YDR120C	RPL20A	P0CX23	172 aa	Known RBP	3.9	□□□□□ -1.78
TRM1	YDR120C	RPL20B	P0CX24	172 aa	Predicted RBP	3.9	□□□□□ -1.78
TRM1	YDR120C	ATR1	P13090	542 aa		3.9	□□□□□ -1.78
TRM1	YDR120C	PMU1	P36069	295 aa		3.9	□□□□□ -1.78
TRM1	YDR120C	YCR041W	P37265	110 aa		3.9	□□□□□ -1.78
TRM1	YDR120C	RPH1	P39956	796 aa		3.9	□□□□□ -1.78
TRM1	YDR120C	JEM1	P40358	645 aa		3.9	□□□□□ -1.78
TRM1	YDR120C	ODC1	Q03028	310 aa		3.9	□□□□□ -1.78
TRM1	YDR120C	RCF1	Q03713	159 aa		3.9	□□□□□ -1.78
TRM1	YDR120C	DCI1	Q08558	271 aa		3.9	□□□□□ -1.78
TRM1	YDR120C	AEP3	Q12089	606 aa		3.9	□□□□□ -1.78
TRM1	YDR120C	MTR10	Q99189	972 aa		3.9	□□□□□ -1.78
TRM1	YDR120C	SUP35	P05453	685 aa	Known RBP	3.9	□□□□□ -1.79
TRM1	YDR120C	YML002W	P0CF17	737 aa		3.9	□□□□□ -1.79
TRM1	YDR120C	YAR066W	P0CX18	203 aa		3.9	□□□□□ -1.79
TRM1	YDR120C	YHR214W	P0CX19	203 aa		3.9	□□□□□ -1.79
TRM1	YDR120C	NDI1	P32340	513 aa		3.9	□□□□□ -1.79
TRM1	YDR120C	BLI1	P35727	113 aa		3.9	□□□□□ -1.79
TRM1	YDR120C	VHS2	P40463	436 aa		3.9	□□□□□ -1.79
TRM1	YDR120C	GSC2	P40989	1895 aa		3.9	□□□□□ -1.79
TRM1	YDR120C	RRT5	P43607	289 aa		3.9	□□□□□ -1.79
TRM1	YDR120C	YJL055W	P47044	245 aa		3.9	□□□□□ -1.79
TRM1	YDR120C	AVT4	P50944	713 aa		3.9	□□□□□ -1.79
TRM1	YDR120C	IRC4	Q03036	179 aa		3.9	□□□□□ -1.79
TRM1	YDR120C	YMR317W	Q04893	1140 aa		3.9	□□□□□ -1.79
TRM1	YDR120C	ARO3	P14843	370 aa	Known RBP	3.89	□□□□□ -1.79
TRM1	YDR120C	CRM1	P30822	1084 aa	Known RBP	3.89	□□□□□ -1.79
TRM1	YDR120C	GLC7	P32598	312 aa	Known RBP	3.89	□□□□□ -1.79
TRM1	YDR120C	MDL1	P33310	695 aa		3.89	□□□□□ -1.79
TRM1	YDR120C	RRN10	P38204	145 aa		3.89	□□□□□ -1.79
TRM1	YDR120C	MDM31	P38880	579 aa		3.89	□□□□□ -1.79
TRM1	YDR120C	PHO86	P46956	311 aa		3.89	□□□□□ -1.79
TRM1	YDR120C	COS10	P52924	374 aa		3.89	□□□□□ -1.79
TRM1	YDR120C	CRZ1	P53968	678 aa		3.89	□□□□□ -1.79
TRM1	YDR120C	RPN5	Q12250	445 aa	Known RBP	3.89	□□□□□ -1.79
TRM1	YDR120C	COX3	P00420	269 aa		3.88	□□□□□ -1.79
TRM1	YDR120C	HEM2	P05373	342 aa		3.88	□□□□□ -1.79
TRM1	YDR120C	PUT3	P25502	979 aa	Predicted RBP	3.88	□□□□□ -1.79
TRM1	YDR120C	NIP1	P32497	812 aa	Known RBP	3.88	□□□□□ -1.79
TRM1	YDR120C	SWH1	P35845	1188 aa		3.88	□□□□□ -1.79
TRM1	YDR120C	ASC1	P38011	319 aa	Known RBP	3.88	□□□□□ -1.79
TRM1	YDR120C	ZTA1	P38230	334 aa	Known RBP	3.88	□□□□□ -1.79
TRM1	YDR120C	GDI1	P39958	451 aa	Known RBP	3.88	□□□□□ -1.79
TRM1	YDR120C	EFM4	P40516	257 aa		3.88	□□□□□ -1.79
TRM1	YDR120C	TAF12	Q03761	539 aa		3.88	□□□□□ -1.79
TRM1	YDR120C	ADE4	P04046	510 aa	Known RBP	3.87	□□□□□ -1.79
TRM1	YDR120C	RNA14	P25298	677 aa	Known RBP	3.87	□□□□□ -1.79
TRM1	YDR120C	CTR86	P25355	563 aa		3.87	□□□□□ -1.79
TRM1	YDR120C	YAT2	P40017	923 aa		3.87	□□□□□ -1.79
TRM1	YDR120C	MPP10	P47083	593 aa	Known RBP	3.87	□□□□□ -1.79
TRM1	YDR120C	YDL186W	P48568	277 aa		3.87	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms