RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeastyeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB1YCL054W NUP100Q02629 959 aa2.56□□□□□ -2
SPB1YCL054W VPS20Q04272 221 aa2.56□□□□□ -2
SPB1YCL054W YOR389WQ08912 624 aa2.56□□□□□ -2
SPB1YCL054W MES1P00958 751 aaKnown RBP2.55□□□□□ -2
SPB1YCL054W LEU4P06208 619 aaKnown RBP2.55□□□□□ -2
SPB1YCL054W BAR1P12630 587 aa2.55□□□□□ -2
SPB1YCL054W PEP5P12868 1029 aa2.55□□□□□ -2
SPB1YCL054W SAM2P19358 384 aaKnown RBP2.55□□□□□ -2
SPB1YCL054W PRO3P32263 286 aaKnown RBP2.55□□□□□ -2
SPB1YCL054W ARC19P33204 171 aaKnown RBP2.55□□□□□ -2
SPB1YCL054W SOR1P35497 357 aaKnown RBP2.55□□□□□ -2
SPB1YCL054W MRPL40P36534 297 aa2.55□□□□□ -2
SPB1YCL054W MSG5P38590 489 aa2.55□□□□□ -2
SPB1YCL054W VPS45P38932 577 aa2.55□□□□□ -2
SPB1YCL054W EPL1P43572 832 aa2.55□□□□□ -2
SPB1YCL054W YIP5P53108 310 aa2.55□□□□□ -2
SPB1YCL054W COP1P53622 1201 aaKnown RBP2.55□□□□□ -2
SPB1YCL054W RHO4Q00246 291 aa2.55□□□□□ -2
SPB1YCL054W YVH1Q02256 364 aaKnown RBP2.55□□□□□ -2
SPB1YCL054W YPL014WQ02606 381 aa2.55□□□□□ -2
SPB1YCL054W CAC2Q04199 468 aa2.55□□□□□ -2
SPB1YCL054W YMR111CQ04461 462 aaPredicted RBP2.55□□□□□ -2
SPB1YCL054W ECM18Q04623 453 aa2.55□□□□□ -2
SPB1YCL054W BSP1Q06604 576 aa2.55□□□□□ -2
SPB1YCL054W SOR2Q07786 357 aa2.55□□□□□ -2
SPB1YCL054W MED2Q12124 431 aa2.55□□□□□ -2
SPB1YCL054W YOR012WQ12351 137 aa2.55□□□□□ -2
SPB1YCL054W RAD61Q99359 647 aa2.55□□□□□ -2
SPB1YCL054W TOR2P32600 2474 aaKnown RBP2.55□□□□□ -2
SPB1YCL054W TYR1P20049 452 aa2.54□□□□□ -2
SPB1YCL054W SAG1P20840 650 aa2.54□□□□□ -2
SPB1YCL054W RDS1P25611 832 aa2.54□□□□□ -2
SPB1YCL054W PHO91P27514 894 aa2.54□□□□□ -2
SPB1YCL054W RIM1P32445 135 aaKnown RBP2.54□□□□□ -2
SPB1YCL054W SSE1P32589 693 aaKnown RBP2.54□□□□□ -2
SPB1YCL054W PEX32P38292 413 aa2.54□□□□□ -2
SPB1YCL054W RRP4P38792 359 aaKnown RBP2.54□□□□□ -2
SPB1YCL054W YHR177WP38867 453 aa2.54□□□□□ -2
SPB1YCL054W SPT8P38915 602 aa2.54□□□□□ -2
SPB1YCL054W SMC2P38989 1170 aaKnown RBP2.54□□□□□ -2
SPB1YCL054W TAX4P47030 604 aa2.54□□□□□ -2
SPB1YCL054W SMM1P53720 384 aaKnown RBP2.54□□□□□ -2
SPB1YCL054W PKH2Q12236 1081 aaKnown RBP2.54□□□□□ -2
SPB1YCL054W RAD50P12753 1312 aa2.54□□□□□ -2
SPB1YCL054W PMR1P13586 950 aa2.54□□□□□ -2
SPB1YCL054W DMC1P25453 334 aa2.54□□□□□ -2
SPB1YCL054W YKL023WP36103 277 aaKnown RBP2.54□□□□□ -2
SPB1YCL054W LIN1P38852 340 aaPredicted RBP2.54□□□□□ -2
SPB1YCL054W YER034WP40022 185 aaKnown RBP2.54□□□□□ -2
SPB1YCL054W INA22P40576 216 aa2.54□□□□□ -2
SPB1YCL054W YPS6P40583 537 aa2.54□□□□□ -2
SPB1YCL054W GAT1P43574 510 aa2.54□□□□□ -2
SPB1YCL054W PHO86P46956 311 aa2.54□□□□□ -2
SPB1YCL054W NMD5P46970 1048 aa2.54□□□□□ -2
SPB1YCL054W KEL2P50090 882 aa2.54□□□□□ -2
SPB1YCL054W ROG1P53118 685 aa2.54□□□□□ -2
SPB1YCL054W MPS2P53159 387 aa2.54□□□□□ -2
SPB1YCL054W LGE1Q02796 332 aaKnown RBP2.54□□□□□ -2
SPB1YCL054W SMA2Q04658 369 aa2.54□□□□□ -2
SPB1YCL054W STE23Q06010 1027 aa2.54□□□□□ -2
SPB1YCL054W GSH2Q08220 491 aa2.54□□□□□ -2
SPB1YCL054W TY3A-GQ12173 290 aa2.54□□□□□ -2
SPB1YCL054W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
SPB1YCL054W YDR061WQ12298 539 aa2.54□□□□□ -2
SPB1YCL054W TY3A-IQ99219 290 aa2.54□□□□□ -2
SPB1YCL054W FUN19P28003 413 aaPredicted RBP2.53□□□□□ -2
SPB1YCL054W ROT2P38138 954 aa2.53□□□□□ -2
SPB1YCL054W MMS4P38257 691 aa2.53□□□□□ -2
SPB1YCL054W DED81P38707 554 aaKnown RBP2.53□□□□□ -2
SPB1YCL054W YJR011CP47086 261 aaPredicted RBP2.53□□□□□ -2
SPB1YCL054W UBP8P50102 471 aa2.53□□□□□ -2
SPB1YCL054W SOL4P53315 255 aa2.53□□□□□ -2
SPB1YCL054W SMA1Q02651 245 aa2.53□□□□□ -2
SPB1YCL054W DIC1Q06143 298 aa2.53□□□□□ -2
SPB1YCL054W CLP1Q08685 445 aaPredicted RBP2.53□□□□□ -2
SPB1YCL054W BI2P03873 423 aa2.53□□□□□ -2
SPB1YCL054W NFT1P0CE68 1218 aa2.53□□□□□ -2
SPB1YCL054W SAM1P10659 382 aaKnown RBP2.53□□□□□ -2
SPB1YCL054W MSS51P32335 436 aa2.53□□□□□ -2
SPB1YCL054W NDI1P32340 513 aa2.53□□□□□ -2
SPB1YCL054W UTR4P32626 227 aa2.53□□□□□ -2
SPB1YCL054W YSC83P32792 385 aa2.53□□□□□ -2
SPB1YCL054W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
SPB1YCL054W MYO3P36006 1272 aa2.53□□□□□ -2
SPB1YCL054W PHO88P38264 188 aaPredicted RBP2.53□□□□□ -2
SPB1YCL054W EFM2P38347 419 aa2.53□□□□□ -2
SPB1YCL054W YER130CP39959 443 aa2.53□□□□□ -2
SPB1YCL054W GAT2P40209 560 aa2.53□□□□□ -2
SPB1YCL054W LOC1P43586 204 aaPredicted RBP2.53□□□□□ -2
SPB1YCL054W DUG3P53871 357 aa2.53□□□□□ -2
SPB1YCL054W SHR3Q02774 210 aa2.53□□□□□ -2
SPB1YCL054W HSP31Q04432 237 aa2.53□□□□□ -2
SPB1YCL054W SWF1Q04629 336 aa2.53□□□□□ -2
SPB1YCL054W ATG38Q05789 226 aaKnown RBP2.53□□□□□ -2
SPB1YCL054W CUR1Q06469 252 aa2.53□□□□□ -2
SPB1YCL054W SUE1Q06524 206 aa2.53□□□□□ -2
SPB1YCL054W RUD3Q12234 484 aaKnown RBP2.53□□□□□ -2
SPB1YCL054W TUS1Q06412 1307 aa2.53□□□□□ -2
SPB1YCL054W JIP3O13555 125 aa2.52□□□□□ -2.01
SPB1YCL054W ILV5P06168 395 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms